RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 FER1L6-AS1Q8NA97 138 aa12.5□□□□□ -0.41
POLR2A-201ENST00000572844 TPPP3Q9BW30 176 aa12.5□□□□□ -0.41
POLR2A-201ENST00000572844 CNFNQ9BYD5 112 aa12.5□□□□□ -0.41
POLR2A-201ENST00000572844 SPTAN1Q13813 2472 aaKnown RBP12.49□□□□□ -0.41
POLR2A-201ENST00000572844 IGHV3-66A0A0C4DH42 116 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 M0R143 59 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 ERCC8Q13216 396 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 C9orf47Q6ZRZ4 202 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 ZNF575Q86XF7 245 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 RNF182Q8N6D2 247 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 TMEM70Q9BUB7 260 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 TMSB15BA0A087X1C1 80 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 C20orf202A1L168 122 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 IGLV1-40P01703 118 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 HIST1H1AQ02539 215 aaPredicted RBP12.49□□□□□ -0.41
POLR2A-201ENST00000572844 SPATA45Q537H7 98 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 C9orf139Q6ZV77 190 aa12.49□□□□□ -0.41
POLR2A-201ENST00000572844 M0QZ24 198 aa12.48□□□□□ -0.41
POLR2A-201ENST00000572844 ZNF207O43670 478 aaKnown RBP12.48□□□□□ -0.41
POLR2A-201ENST00000572844 ZNF138P52744 262 aa12.48□□□□□ -0.41
POLR2A-201ENST00000572844 LINC01356Q8N9X3 169 aa12.48□□□□□ -0.41
POLR2A-201ENST00000572844 AGPAT4-IT1Q9H0P7 198 aa12.48□□□□□ -0.41
POLR2A-201ENST00000572844 A0A0G2JLM5 398 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 J3QLI3 93 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 LEPROTL1O95214 131 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 AVPP01185 164 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 ZNF705AQ6ZN79 300 aaPredicted RBP12.47□□□□□ -0.41
POLR2A-201ENST00000572844 KLHDC1Q8N7A1 406 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 SNHG12Q9BXW3 62 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 IGHV3OR16-13A0A075B7E8 117 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 A0A096LNT2 108 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 IGHV3-74A0A0B4J1X5 117 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 TMEM213A2RRL7 107 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 EREGO14944 169 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 CFHR3Q02985 330 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 TMEM78Q5T7P6 136 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 ZMAT5Q9UDW3 170 aaKnown RBP12.47□□□□□ -0.41
POLR2A-201ENST00000572844 LENEPQ9Y5L5 61 aa12.47□□□□□ -0.41
POLR2A-201ENST00000572844 FLNCQ14315 2725 aa12.46□□□□□ -0.41
POLR2A-201ENST00000572844 ORM1P02763 201 aa12.46□□□□□ -0.41
POLR2A-201ENST00000572844 BLCAPP62952 87 aa12.46□□□□□ -0.41
POLR2A-201ENST00000572844 IL17RELQ6ZVW7 336 aa12.46□□□□□ -0.41
POLR2A-201ENST00000572844 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.46□□□□□ -0.411e-6■■■□□ 17.1
POLR2A-201ENST00000572844 COL12A1Q99715 3063 aa12.46□□□□□ -0.42
POLR2A-201ENST00000572844 TRAV9-2A0A087WT02 112 aa12.46□□□□□ -0.42
POLR2A-201ENST00000572844 IGHV3-49A0A0A0MS15 119 aa12.46□□□□□ -0.42
POLR2A-201ENST00000572844 COX6B1P14854 86 aa12.46□□□□□ -0.42
POLR2A-201ENST00000572844 ORMDL3Q8N138 153 aa12.46□□□□□ -0.42
POLR2A-201ENST00000572844 TMEM191AQ9H0A3 160 aa12.46□□□□□ -0.42
POLR2A-201ENST00000572844 AP5S1Q9NUS5 200 aa12.46□□□□□ -0.42
POLR2A-201ENST00000572844 UQCR10Q9UDW1 63 aa12.46□□□□□ -0.42
POLR2A-201ENST00000572844 HSPB8Q9UJY1 196 aa12.46□□□□□ -0.42
POLR2A-201ENST00000572844 A0A1B0GV90 55 aa12.45□□□□□ -0.42
POLR2A-201ENST00000572844 SYS1-DBNDD2H3BUS1 97 aa12.45□□□□□ -0.42
POLR2A-201ENST00000572844 TRBV12-3P01733 135 aa12.45□□□□□ -0.42
POLR2A-201ENST00000572844 IGLC3P0DOY3 106 aa12.45□□□□□ -0.42
POLR2A-201ENST00000572844 UNQ9165/PRO28630Q6UXU0 137 aa12.45□□□□□ -0.42
POLR2A-201ENST00000572844 C16orf92Q96LL3 132 aa12.45□□□□□ -0.42
POLR2A-201ENST00000572844 ZNF462Q96JM2 2506 aa12.45□□□□□ -0.42
POLR2A-201ENST00000572844 PF4V1P10720 104 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 AMN1Q8IY45 258 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 OR4X2Q8NGF9 303 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 PRELID3AQ96N28 172 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 USP9XQ93008 2570 aaPredicted RBP12.44□□□□□ -0.42
POLR2A-201ENST00000572844 D6R8Y8 96 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 TWIST1Q15672 202 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 MRPL51Q4U2R6 128 aaKnown RBP12.44□□□□□ -0.42
POLR2A-201ENST00000572844 PET117Q6UWS5 81 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 FA2HQ7L5A8 372 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 ZNF843Q8N446 348 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 PRSS3P2Q8NHM4 247 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 NRGNQ92686 78 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 NPFFR1Q9GZQ6 430 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 KLK15Q9H2R5 256 aa12.44□□□□□ -0.42
POLR2A-201ENST00000572844 MYO18BQ8IUG5 2567 aa12.43□□□□□ -0.42
POLR2A-201ENST00000572844 SOCS3O14543 225 aa12.43□□□□□ -0.42
POLR2A-201ENST00000572844 SMAD7O15105 426 aaKnown RBP12.43□□□□□ -0.42
POLR2A-201ENST00000572844 TMEM89A2RUT3 159 aa12.42□□□□□ -0.42
POLR2A-201ENST00000572844 CSN3P07498 182 aa12.42□□□□□ -0.42
POLR2A-201ENST00000572844 Q6ZS46 218 aa12.42□□□□□ -0.42
POLR2A-201ENST00000572844 SPATA12Q7Z6I5 190 aa12.42□□□□□ -0.42
POLR2A-201ENST00000572844 GPHB5Q86YW7 130 aa12.42□□□□□ -0.42
POLR2A-201ENST00000572844 LINC00477Q96M19 166 aa12.42□□□□□ -0.42
POLR2A-201ENST00000572844 MAP1LC3CQ9BXW4 147 aa12.42□□□□□ -0.42
POLR2A-201ENST00000572844 ASH1LQ9NR48 2969 aaKnown RBP12.42□□□□□ -0.42
POLR2A-201ENST00000572844 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
POLR2A-201ENST00000572844 OVOL1O14753 267 aa12.42□□□□□ -0.42
POLR2A-201ENST00000572844 PPBPP02775 128 aa12.42□□□□□ -0.42
POLR2A-201ENST00000572844 OR10AG1Q8NH19 301 aa12.42□□□□□ -0.42
POLR2A-201ENST00000572844 LOXL1Q08397 574 aaPredicted RBP12.41□□□□□ -0.42
POLR2A-201ENST00000572844 LINC00173Q6ZV60 143 aa12.41□□□□□ -0.42
POLR2A-201ENST00000572844 LAMTOR2Q9Y2Q5 125 aa12.41□□□□□ -0.42
POLR2A-201ENST00000572844 K7EMT4 169 aa12.41□□□□□ -0.42
POLR2A-201ENST00000572844 IGHV3-11P01762 117 aa12.41□□□□□ -0.42
POLR2A-201ENST00000572844 NUTF2P61970 127 aaKnown RBP12.41□□□□□ -0.42
POLR2A-201ENST00000572844 C20orf173Q96LM9 149 aa12.41□□□□□ -0.42
POLR2A-201ENST00000572844 SIGLEC8Q9NYZ4 499 aa12.41□□□□□ -0.42
POLR2A-201ENST00000572844 IGHV7-4-1A0A0J9YVY3 117 aa12.4□□□□□ -0.42
POLR2A-201ENST00000572844 DEFB112Q30KQ8 113 aa12.4□□□□□ -0.42
POLR2A-201ENST00000572844 ATOH7Q8N100 152 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms