RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 ODF3Q96PU9 254 aa9.63□□□□□ -0.87
RAB40B-204ENST00000571554 MARVELD1Q9BSK0 173 aa9.63□□□□□ -0.87
RAB40B-204ENST00000571554 AGPAT4-IT1Q9H0P7 198 aa9.63□□□□□ -0.87
RAB40B-204ENST00000571554 A0A0J9YY99 117 aa9.62□□□□□ -0.87
RAB40B-204ENST00000571554 C7orf71A4D174 169 aa9.62□□□□□ -0.87
RAB40B-204ENST00000571554 SNURFLB1AK76 121 aa9.62□□□□□ -0.87
RAB40B-204ENST00000571554 RNASE4P34096 147 aaKnown RBP9.62□□□□□ -0.87
RAB40B-204ENST00000571554 PRR9Q5T870 116 aa9.62□□□□□ -0.87
RAB40B-204ENST00000571554 Q6ZQT7 251 aa9.62□□□□□ -0.87
RAB40B-204ENST00000571554 PHYHIPLQ96FC7 376 aa9.62□□□□□ -0.87
RAB40B-204ENST00000571554 VGLL1Q99990 258 aa9.62□□□□□ -0.87
RAB40B-204ENST00000571554 AAMDCQ9H7C9 122 aa9.62□□□□□ -0.87
RAB40B-204ENST00000571554 DYNC1H1Q14204 4646 aaKnown RBP9.61□□□□□ -0.87
RAB40B-204ENST00000571554 TRAV26-1A0A087WT03 109 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
RAB40B-204ENST00000571554 NBEAP1P0C6P0 100 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 HOXA5P20719 270 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 DEFA1P59665 94 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 DEFA3P59666 94 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 CYCSP99999 105 aaKnown RBP9.61□□□□□ -0.87
RAB40B-204ENST00000571554 PDE6HQ13956 83 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 Q6ZTI0 123 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 FXYD5Q96DB9 178 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 ATP5SQ99766 215 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 PAXXQ9BUH6 204 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 OR51M1Q9H341 326 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 GSN-AS1Q9NRJ2 163 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 PRELID1Q9Y255 219 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 HSPB11Q9Y547 144 aa9.61□□□□□ -0.87
RAB40B-204ENST00000571554 OR7C2O60412 319 aa9.6□□□□□ -0.87
RAB40B-204ENST00000571554 MPC2O95563 127 aa9.6□□□□□ -0.87
RAB40B-204ENST00000571554 FFAR4Q5NUL3 377 aa9.6□□□□□ -0.87
RAB40B-204ENST00000571554 LINC00612Q8N6U2 182 aa9.6□□□□□ -0.87
RAB40B-204ENST00000571554 Q8TAT8 98 aa9.6□□□□□ -0.87
RAB40B-204ENST00000571554 FAM19A4Q96LR4 140 aa9.6□□□□□ -0.87
RAB40B-204ENST00000571554 PYGO2Q9BRQ0 406 aa9.6□□□□□ -0.87
RAB40B-204ENST00000571554 MRPL32Q9BYC8 188 aaKnown RBP9.6□□□□□ -0.87
RAB40B-204ENST00000571554 TMPRSS5Q9H3S3 457 aa9.6□□□□□ -0.87
RAB40B-204ENST00000571554 MBD2Q9UBB5 411 aa9.6□□□□□ -0.87
RAB40B-204ENST00000571554 FUT9Q9Y231 359 aa9.6□□□□□ -0.87
RAB40B-204ENST00000571554 LINC00588Q9Y4M8 146 aa9.6□□□□□ -0.87
RAB40B-204ENST00000571554 KLLNB2CW77 178 aa9.59□□□□□ -0.87
RAB40B-204ENST00000571554 C17orf112F2Z3M2 114 aa9.59□□□□□ -0.87
RAB40B-204ENST00000571554 ZNF324O75467 553 aaPredicted RBP9.59□□□□□ -0.87
RAB40B-204ENST00000571554 GPX1P07203 203 aa9.59□□□□□ -0.87
RAB40B-204ENST00000571554 TMEM78Q5T7P6 136 aa9.59□□□□□ -0.87
RAB40B-204ENST00000571554 C1orf134Q5TEV5 83 aa9.59□□□□□ -0.87
RAB40B-204ENST00000571554 ZNRF2Q8NHG8 242 aa9.59□□□□□ -0.87
RAB40B-204ENST00000571554 GNPNAT1Q96EK6 184 aaPredicted RBP9.59□□□□□ -0.87
RAB40B-204ENST00000571554 ZNF503Q96F45 646 aa9.59□□□□□ -0.87
RAB40B-204ENST00000571554 LINC00477Q96M19 166 aa9.59□□□□□ -0.87
RAB40B-204ENST00000571554 KCNIP2Q9NS61 270 aa9.59□□□□□ -0.87
RAB40B-204ENST00000571554 DNAH11Q96DT5 4516 aa9.58□□□□□ -0.88
RAB40B-204ENST00000571554 RPL12P30050 165 aaKnown RBP9.58□□□□□ -0.88
RAB40B-204ENST00000571554 CCL18P55774 89 aa9.58□□□□□ -0.88
RAB40B-204ENST00000571554 RANP62826 216 aaKnown RBP9.58□□□□□ -0.88
RAB40B-204ENST00000571554 UBE2L3P68036 154 aaKnown RBP9.58□□□□□ -0.88
RAB40B-204ENST00000571554 C9orf47Q6ZRZ4 202 aa9.58□□□□□ -0.88
RAB40B-204ENST00000571554 SSX7Q7RTT5 188 aa9.58□□□□□ -0.88
RAB40B-204ENST00000571554 ZFAND2AQ8N6M9 145 aa9.58□□□□□ -0.88
RAB40B-204ENST00000571554 C11orf72Q8NBR9 251 aa9.58□□□□□ -0.88
RAB40B-204ENST00000571554 WFDC1Q9HC57 220 aa9.58□□□□□ -0.88
RAB40B-204ENST00000571554 TP53TG3Q9ULZ0 132 aa9.58□□□□□ -0.88
RAB40B-204ENST00000571554 KLF12Q9Y4X4 402 aa9.58□□□□□ -0.88
RAB40B-204ENST00000571554 TRGV1A0A0A0MS02 117 aa9.57□□□□□ -0.88
RAB40B-204ENST00000571554 NBDYA0A0U1RRE5 68 aa9.57□□□□□ -0.88
RAB40B-204ENST00000571554 IFNA5P01569 189 aa9.57□□□□□ -0.88
RAB40B-204ENST00000571554 PET100P0DJ07 73 aa9.57□□□□□ -0.88
RAB40B-204ENST00000571554 M6PRP20645 277 aa9.57□□□□□ -0.88
RAB40B-204ENST00000571554 FAM3BP58499 235 aaPredicted RBP9.57□□□□□ -0.88
RAB40B-204ENST00000571554 SOHLH1Q5JUK2 328 aa9.57□□□□□ -0.88
RAB40B-204ENST00000571554 EIF4E3Q8N5X7 224 aaKnown RBP9.57□□□□□ -0.88
RAB40B-204ENST00000571554 SCGB1C1Q8TD33 95 aa9.57□□□□□ -0.88
RAB40B-204ENST00000571554 KRTAP17-1Q9BYP8 105 aa9.57□□□□□ -0.88
RAB40B-204ENST00000571554 Q9H3A6 140 aa9.57□□□□□ -0.88
RAB40B-204ENST00000571554 TRGV2A0A075B6R0 118 aa9.56□□□□□ -0.88
RAB40B-204ENST00000571554 RGS13O14921 159 aa9.56□□□□□ -0.88
RAB40B-204ENST00000571554 CRISP2P16562 243 aa9.56□□□□□ -0.88
RAB40B-204ENST00000571554 DAZ2Q13117 558 aaKnown RBP9.56□□□□□ -0.88
RAB40B-204ENST00000571554 ZNF680Q8NEM1 530 aa9.56□□□□□ -0.88
RAB40B-204ENST00000571554 RXFP4Q8TDU9 374 aa9.56□□□□□ -0.88
RAB40B-204ENST00000571554 ZNF492Q9P255 531 aa9.56□□□□□ -0.88
RAB40B-204ENST00000571554 RPH3ALQ9UNE2 315 aa9.56□□□□□ -0.88
RAB40B-204ENST00000571554 ALG5Q9Y673 324 aa9.56□□□□□ -0.88
RAB40B-204ENST00000571554 IGHV3-53P01767 116 aa9.55□□□□□ -0.88
RAB40B-204ENST00000571554 ZNF138P52744 262 aa9.55□□□□□ -0.88
RAB40B-204ENST00000571554 MUC21Q5SSG8 566 aa9.55□□□□□ -0.88
RAB40B-204ENST00000571554 ZNF575Q86XF7 245 aa9.55□□□□□ -0.88
RAB40B-204ENST00000571554 HYLS1Q96M11 299 aa9.55□□□□□ -0.88
RAB40B-204ENST00000571554 MRPL16Q9NX20 251 aaKnown RBP9.55□□□□□ -0.88
RAB40B-204ENST00000571554 IGHV1OR15-1A0A075B7D0 117 aa9.54□□□□□ -0.88
RAB40B-204ENST00000571554 HMGB3O15347 200 aaKnown RBP9.54□□□□□ -0.88
RAB40B-204ENST00000571554 CSN1S1P47710 185 aa9.54□□□□□ -0.88
RAB40B-204ENST00000571554 TCL1AP56279 114 aa9.54□□□□□ -0.88
RAB40B-204ENST00000571554 RAB2AP61019 212 aa9.54□□□□□ -0.88
RAB40B-204ENST00000571554 TNP2Q05952 138 aa9.54□□□□□ -0.88
RAB40B-204ENST00000571554 ESRGQ1W209 222 aa9.54□□□□□ -0.88
RAB40B-204ENST00000571554 ANXA2RQ3ZCQ2 193 aa9.54□□□□□ -0.88
RAB40B-204ENST00000571554 KHDC3LQ587J8 217 aa9.54□□□□□ -0.88
RAB40B-204ENST00000571554 ARPC5LQ9BPX5 153 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms