RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 RPL24P83731 157 aaKnown RBP12.23□□□□□ -0.45
COMMD4-215ENST00000566843 NCOR2Q9Y618 2525 aa12.23□□□□□ -0.45
COMMD4-215ENST00000566843 ANKRD11Q6UB99 2663 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-215ENST00000566843 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
COMMD4-215ENST00000566843 PPIAL4CA0A0B4J2A2 164 aa12.22□□□□□ -0.45
COMMD4-215ENST00000566843 E9PLD3 99 aa12.22□□□□□ -0.45
COMMD4-215ENST00000566843 C16orf97H3BN30 126 aa12.22□□□□□ -0.45
COMMD4-215ENST00000566843 CNIH1O95406 144 aa12.22□□□□□ -0.45
COMMD4-215ENST00000566843 GFRALQ6UXV0 394 aa12.22□□□□□ -0.45
COMMD4-215ENST00000566843 CEND1Q8N111 149 aa12.22□□□□□ -0.45
COMMD4-215ENST00000566843 RPEQ96AT9 228 aa12.22□□□□□ -0.45
COMMD4-215ENST00000566843 RALYQ9UKM9 306 aaKnown RBP12.22□□□□□ -0.45
COMMD4-215ENST00000566843 ATP5LO75964 103 aa12.22□□□□□ -0.45
COMMD4-215ENST00000566843 TTTY13Q9BZ97 58 aa12.22□□□□□ -0.45
COMMD4-215ENST00000566843 K7ENP7 123 aa12.21□□□□□ -0.45
COMMD4-215ENST00000566843 TNFRSF6BO95407 300 aa12.21□□□□□ -0.45
COMMD4-215ENST00000566843 Q6ZS92 163 aa12.21□□□□□ -0.45
COMMD4-215ENST00000566843 FAM57AQ8TBR7 257 aa12.21□□□□□ -0.45
COMMD4-215ENST00000566843 K7ERJ3 54 aa12.21□□□□□ -0.46
COMMD4-215ENST00000566843 DPM2O94777 84 aa12.21□□□□□ -0.46
COMMD4-215ENST00000566843 GAS8-AS1O95177 125 aa12.21□□□□□ -0.46
COMMD4-215ENST00000566843 PRB3Q04118 309 aaPredicted RBP12.21□□□□□ -0.46
COMMD4-215ENST00000566843 Q5PR19 223 aa12.21□□□□□ -0.46
COMMD4-215ENST00000566843 FOXI2Q6ZQN5 318 aa12.21□□□□□ -0.46
COMMD4-215ENST00000566843 WFDC12Q8WWY7 111 aa12.21□□□□□ -0.46
COMMD4-215ENST00000566843 MSRB1Q9NZV6 116 aa12.21□□□□□ -0.46
COMMD4-215ENST00000566843 GNG7O60262 68 aa12.2□□□□□ -0.46
COMMD4-215ENST00000566843 PRSS1P07477 247 aa12.2□□□□□ -0.46
COMMD4-215ENST00000566843 TAL2Q16559 108 aa12.2□□□□□ -0.46
COMMD4-215ENST00000566843 BSNQ9UPA5 3926 aa12.2□□□□□ -0.46
COMMD4-215ENST00000566843 NPIPB5A8MRT5 1133 aa12.2□□□□□ -0.46
COMMD4-215ENST00000566843 IGLL5B9A064 214 aa12.2□□□□□ -0.46
COMMD4-215ENST00000566843 F8W1H4 67 aa12.2□□□□□ -0.46
COMMD4-215ENST00000566843 F8W735 103 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-215ENST00000566843 IGHG4P01861 327 aa12.2□□□□□ -0.46
COMMD4-215ENST00000566843 RPL7P18124 248 aaKnown RBP12.2□□□□□ -0.46
COMMD4-215ENST00000566843 MFAP4P55083 255 aa12.2□□□□□ -0.46
COMMD4-215ENST00000566843 Q8N8P6 123 aa12.2□□□□□ -0.46
COMMD4-215ENST00000566843 SIGMAR1Q99720 223 aa12.2□□□□□ -0.46
COMMD4-215ENST00000566843 SPANXB1Q9NS25 103 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-215ENST00000566843 IGLV11-55A0A075B6I3 123 aa12.19□□□□□ -0.46
COMMD4-215ENST00000566843 IGLV2-18A0A075B6J9 118 aa12.19□□□□□ -0.46
COMMD4-215ENST00000566843 AZU1P20160 251 aa12.19□□□□□ -0.46
COMMD4-215ENST00000566843 KLF17Q5JT82 389 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-215ENST00000566843 GTSCR1Q86UQ5 136 aa12.19□□□□□ -0.46
COMMD4-215ENST00000566843 FANCD2OSQ96PS1 177 aa12.19□□□□□ -0.46
COMMD4-215ENST00000566843 FOXC2Q99958 501 aa12.19□□□□□ -0.46
COMMD4-215ENST00000566843 NHP2Q9NX24 153 aaKnown RBP12.19□□□□□ -0.46
COMMD4-215ENST00000566843 A0A1W2PRD5 423 aa12.18□□□□□ -0.46
COMMD4-215ENST00000566843 A0A1W2PRF3 423 aa12.18□□□□□ -0.46
COMMD4-215ENST00000566843 A0A1W2PRM7 423 aa12.18□□□□□ -0.46
COMMD4-215ENST00000566843 COX7A1P24310 79 aa12.18□□□□□ -0.46
COMMD4-215ENST00000566843 CD300EQ496F6 205 aaPredicted RBP12.18□□□□□ -0.46
COMMD4-215ENST00000566843 Q8TAT8 98 aa12.18□□□□□ -0.46
COMMD4-215ENST00000566843 TMEM158Q8WZ71 300 aa12.18□□□□□ -0.46
COMMD4-215ENST00000566843 PTPRQQ9UMZ3 2332 aa12.18□□□□□ -0.46
COMMD4-215ENST00000566843 ZC2HC1BQ5TFG8 222 aa12.18□□□□□ -0.46
COMMD4-215ENST00000566843 NPBQ8NG41 125 aa12.18□□□□□ -0.46
COMMD4-215ENST00000566843 DYNLRB1Q9NP97 96 aa12.18□□□□□ -0.46
COMMD4-215ENST00000566843 SMAD5-AS1Q9Y6J3 95 aa12.18□□□□□ -0.46
COMMD4-215ENST00000566843 A0A0G2JNJ9 132 aa12.17□□□□□ -0.46
COMMD4-215ENST00000566843 FABP5P3A8MUU1 101 aa12.17□□□□□ -0.46
COMMD4-215ENST00000566843 TIMM23O14925 209 aa12.17□□□□□ -0.46
COMMD4-215ENST00000566843 NBR2O15453 112 aa12.17□□□□□ -0.46
COMMD4-215ENST00000566843 NDUFA3O95167 84 aa12.17□□□□□ -0.46
COMMD4-215ENST00000566843 Q9UFV3 132 aa12.17□□□□□ -0.46
COMMD4-215ENST00000566843 S4R3C0 116 aa12.17□□□□□ -0.46
COMMD4-215ENST00000566843 TMEM8BA6NDV4 472 aa12.17□□□□□ -0.46
COMMD4-215ENST00000566843 CHD8Q9HCK8 2581 aa12.16□□□□□ -0.46
COMMD4-215ENST00000566843 A0A1B0GV72 72 aa12.16□□□□□ -0.46
COMMD4-215ENST00000566843 ORM1P02763 201 aa12.16□□□□□ -0.46
COMMD4-215ENST00000566843 WFDC2Q14508 124 aa12.16□□□□□ -0.46
COMMD4-215ENST00000566843 SPATA25Q9BR10 227 aa12.16□□□□□ -0.46
COMMD4-215ENST00000566843 ZZEF1O43149 2961 aa12.16□□□□□ -0.46
COMMD4-215ENST00000566843 PIEZO2Q9H5I5 2752 aa12.16□□□□□ -0.46
COMMD4-215ENST00000566843 GAGE12HA6NDE8 117 aa12.16□□□□□ -0.46
COMMD4-215ENST00000566843 SCGB2A2Q13296 93 aa12.16□□□□□ -0.46
COMMD4-215ENST00000566843 ZNF672Q499Z4 452 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-215ENST00000566843 ZGRF1Q86YA3 2104 aa12.16□□□□□ -0.46
COMMD4-215ENST00000566843 MAPKAPK5-AS1Q8N8E1 139 aa12.16□□□□□ -0.46
COMMD4-215ENST00000566843 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-215ENST00000566843 E7EQL1 145 aa12.15□□□□□ -0.46
COMMD4-215ENST00000566843 J3QR89 54 aa12.15□□□□□ -0.46
COMMD4-215ENST00000566843 GATA1P15976 413 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-215ENST00000566843 C12orf74Q32Q52 190 aa12.15□□□□□ -0.46
COMMD4-215ENST00000566843 IGFBPL1Q8WX77 278 aa12.15□□□□□ -0.46
COMMD4-215ENST00000566843 CFHR4Q92496 578 aa12.15□□□□□ -0.46
COMMD4-215ENST00000566843 ZNF479Q96JC4 524 aa12.15□□□□□ -0.46
COMMD4-215ENST00000566843 GTSF1LQ9H1H1 148 aa12.15□□□□□ -0.46
COMMD4-215ENST00000566843 LINC01619G3V211 115 aa12.14□□□□□ -0.47
COMMD4-215ENST00000566843 DTX2Q86UW9 622 aa12.14□□□□□ -0.47
COMMD4-215ENST00000566843 TRAV40A0A0B4J280 105 aa12.14□□□□□ -0.47
COMMD4-215ENST00000566843 HLA-DMBP28068 263 aa12.14□□□□□ -0.47
COMMD4-215ENST00000566843 C21orf62Q9NYP8 219 aa12.14□□□□□ -0.47
COMMD4-215ENST00000566843 MRPL35Q9NZE8 188 aaKnown RBP12.14□□□□□ -0.47
COMMD4-215ENST00000566843 ZNF207O43670 478 aaKnown RBP12.13□□□□□ -0.47
COMMD4-215ENST00000566843 GOSR1O95249 250 aa12.13□□□□□ -0.47
COMMD4-215ENST00000566843 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
COMMD4-215ENST00000566843 ZNF502Q8TBZ5 544 aa12.13□□□□□ -0.47
COMMD4-215ENST00000566843 TMEM160Q9NX00 188 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms