RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SUMO1P63165 101 aaKnown RBP8.42□□□□□ -1.06
KARS-207ENST00000566560 HAGHQ16775 308 aa8.42□□□□□ -1.06
KARS-207ENST00000566560 CST9LP1Q5W188 147 aa8.42□□□□□ -1.06
KARS-207ENST00000566560 MORN3Q6PF18 240 aaPredicted RBP8.42□□□□□ -1.06
KARS-207ENST00000566560 SBSPONQ8IVN8 264 aa8.42□□□□□ -1.06
KARS-207ENST00000566560 CLUHP3Q96NS8 147 aa8.42□□□□□ -1.06
KARS-207ENST00000566560 ASCL2Q99929 193 aa8.42□□□□□ -1.06
KARS-207ENST00000566560 NKX6-2Q9C056 277 aaPredicted RBP8.42□□□□□ -1.06
KARS-207ENST00000566560 CSTL1Q9H114 145 aa8.42□□□□□ -1.06
KARS-207ENST00000566560 PPP1R14DQ9NXH3 145 aa8.42□□□□□ -1.06
KARS-207ENST00000566560 PRKDCP78527 4128 aaKnown RBP8.41□□□□□ -1.06
KARS-207ENST00000566560 RBAKDNA6NC62 111 aa8.41□□□□□ -1.06
KARS-207ENST00000566560 ATP5G3P48201 142 aa8.41□□□□□ -1.06
KARS-207ENST00000566560 FXYD7P58549 80 aa8.41□□□□□ -1.06
KARS-207ENST00000566560 CCL20P78556 96 aa8.41□□□□□ -1.06
KARS-207ENST00000566560 ERCC8Q13216 396 aa8.41□□□□□ -1.06
KARS-207ENST00000566560 AMTNQ6UX39 209 aa8.41□□□□□ -1.06
KARS-207ENST00000566560 GOLT1AQ6ZVE7 132 aa8.41□□□□□ -1.06
KARS-207ENST00000566560 SLC35B3Q9H1N7 401 aa8.41□□□□□ -1.06
KARS-207ENST00000566560 TMA7Q9Y2S6 64 aaKnown RBP8.41□□□□□ -1.06
KARS-207ENST00000566560 SERTM2A0A1B0GWG4 89 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 C11orf94C9JXX5 98 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 K7EQM0 130 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 PEX7O00628 323 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 UBE2CO00762 179 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 TCRAP04437 139 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 BCL2P10415 239 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 SPINK13Q1W4C9 94 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 DEFB135Q30KP9 77 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 TMEM78Q5T7P6 136 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 ARL6IP6Q8N6S5 226 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 CYB561D1Q8N8Q1 229 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 Q8TAT8 98 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 ODF3Q96PU9 254 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 VGLL1Q99990 258 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 TCEAL7Q9BRU2 100 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 ATG101Q9BSB4 218 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 C1QTNF4Q9BXJ3 329 aa8.4□□□□□ -1.06
KARS-207ENST00000566560 M0R2Z0 102 aa8.39□□□□□ -1.07
KARS-207ENST00000566560 CT45A10P0DMU9 189 aa8.39□□□□□ -1.07
KARS-207ENST00000566560 LEPP41159 167 aa8.39□□□□□ -1.07
KARS-207ENST00000566560 C9orf47Q6ZRZ4 202 aa8.39□□□□□ -1.07
KARS-207ENST00000566560 PCNPQ8WW12 178 aaKnown RBP8.39□□□□□ -1.07
KARS-207ENST00000566560 LINC00477Q96M19 166 aa8.39□□□□□ -1.07
KARS-207ENST00000566560 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
KARS-207ENST00000566560 AGPAT4-IT1Q9H0P7 198 aa8.39□□□□□ -1.07
KARS-207ENST00000566560 RETNQ9HD89 108 aa8.39□□□□□ -1.07
KARS-207ENST00000566560 XCL2Q9UBD3 114 aa8.39□□□□□ -1.07
KARS-207ENST00000566560 EPDR1Q9UM22 224 aa8.39□□□□□ -1.07
KARS-207ENST00000566560 TRAV8-1A0A0A6YYK1 113 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 F6UZH7 168 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 INSP01308 110 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 AMBPP02760 352 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 NMBP08949 121 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 GIG44P09565 113 aaPredicted RBP8.38□□□□□ -1.07
KARS-207ENST00000566560 TSPOP30536 169 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 TAGLN2P37802 199 aaKnown RBP8.38□□□□□ -1.07
KARS-207ENST00000566560 AKR1C3P42330 323 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 CDKN1BP46527 198 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 ZNF138P52744 262 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 Q6ZWC4 215 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 CCDC28AQ8IWP9 274 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 TMEM75Q8N9X5 138 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 LYPD6BQ8NI32 183 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 HIST1H2BAQ96A08 127 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 RCHY1Q96PM5 261 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 TM2D3Q9BRN9 247 aa8.38□□□□□ -1.07
KARS-207ENST00000566560 TRAV12-2A0A075B6T6 113 aa8.37□□□□□ -1.07
KARS-207ENST00000566560 LOC102723971A0A1B0GUV8 181 aa8.37□□□□□ -1.07
KARS-207ENST00000566560 J3KRW8 73 aa8.37□□□□□ -1.07
KARS-207ENST00000566560 MEF2BQ02080 365 aaPredicted RBP8.37□□□□□ -1.07
KARS-207ENST00000566560 ZNF767PQ75MW2 155 aa8.37□□□□□ -1.07
KARS-207ENST00000566560 SGK494Q96LW2 274 aa8.37□□□□□ -1.07
KARS-207ENST00000566560 TXNDC17Q9BRA2 123 aa8.37□□□□□ -1.07
KARS-207ENST00000566560 NDFIP1Q9BT67 221 aa8.37□□□□□ -1.07
KARS-207ENST00000566560 ZMAT4Q9H898 229 aa8.37□□□□□ -1.07
KARS-207ENST00000566560 ZNF492Q9P255 531 aa8.37□□□□□ -1.07
KARS-207ENST00000566560 FBLL1A6NHQ2 334 aaKnown RBP8.36□□□□□ -1.07
KARS-207ENST00000566560 RAB14P61106 215 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 UBE2G1P62253 170 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 FLI1Q01543 452 aaPredicted RBP8.36□□□□□ -1.07
KARS-207ENST00000566560 IFITM2Q01629 132 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 PMS2P11Q13670 270 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 TOR2AQ5JU69 321 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 GFI1BQ5VTD9 330 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 Q86TA4 180 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 RNF183Q96D59 192 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 FAM19A4Q96LR4 140 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 IGF2BP2-AS1Q96M15 143 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 VAX2Q9UIW0 290 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 TP53TG1Q9Y2A0 90 aa8.36□□□□□ -1.07
KARS-207ENST00000566560 TENM3Q9P273 2699 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 TRAV34A0A0B4J273 112 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 TRBV7-9A0A0J9YWB2 115 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 KLLNB2CW77 178 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 CRXO43186 299 aaPredicted RBP8.35□□□□□ -1.07
KARS-207ENST00000566560 SPRY2O43597 315 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 IGLV2-11P01706 119 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 NHLRC4P0CG21 123 aaPredicted RBP8.35□□□□□ -1.07
KARS-207ENST00000566560 CRISP2P16562 243 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms