RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 IFNA6P05013 189 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 IFNA4P05014 189 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 CTXN2P0C2S0 81 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 P0C880 135 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 RD3LP0DJH9 198 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 ARL14EPLP0DKL9 152 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 DEFB130BP0DP73 79 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 DEFB130AP0DP74 79 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 IAPPP10997 89 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 ORM2P19652 201 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 DTYMKP23919 212 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 RCVRNP35243 200 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 SNCAP37840 140 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 INSL3P51460 131 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 RND2P52198 227 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 TAS2R31P59538 309 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 GABARAPL2P60520 117 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 RRAS2P62070 204 aaPredicted RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 POLR2GP62487 172 aaKnown RBP eCLIP0.71□□□□□ -2.3
SMG1-212ENST00000566328 SUPT4H1P63272 117 aaKnown RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 HAMPP81172 84 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 ERHP84090 104 aaKnown RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 IFITM3Q01628 133 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 FGL1Q08830 312 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 ERCC8Q13216 396 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 PPP1R1AQ13522 171 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 IL18Q14116 193 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 TRAM1Q15629 374 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 USF2Q15853 346 aaPredicted RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 TATDN3Q17R31 274 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 TRIM16LQ309B1 348 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 C12orf74Q32Q52 190 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 GCSAMLQ5JQS6 135 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 PSMG4Q5JS54 123 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 UBE2NLQ5JXB2 153 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 SPANXN5Q5MJ07 72 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 LCN12Q6JVE5 192 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 PYHIN1Q6K0P9 492 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 KRTAP5-10Q6L8G5 202 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 FAM71F2Q6NXP2 309 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 PRSS54Q6PEW0 395 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 CEMP1Q6PRD7 247 aaPredicted RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 PATE2Q6UY27 113 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 Q6ZS49 121 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 TCF24Q7RTU0 167 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 H2BFWTQ7Z2G1 175 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 TMED4Q7Z7H5 227 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 TPRA1Q86W33 373 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 FAM223AQ8IWN6 122 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 SGPP2Q8IWX5 399 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 C1orf158Q8N1D5 194 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 Q8N402 240 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 SLC35G3Q8N808 338 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 GDPD1Q8N9F7 314 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 STXBP6Q8NFX7 210 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 OR4B1Q8NGF8 309 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 OR4C16Q8NGL9 310 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 OR1L6Q8NGR2 347 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 OR4S2Q8NH73 311 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 OR4A5Q8NH83 315 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 DYNC2LI1Q8TCX1 351 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 CD300LFQ8TDQ1 290 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 DCANP1Q8TF63 244 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 THRSPQ92748 146 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 TMEM230Q96A57 120 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 DIRAS2Q96HU8 199 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 ADTRPQ96IZ2 230 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 HSD17B10Q99714 261 aaKnown RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 RARRES2Q99969 163 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 RSG1Q9BU20 258 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 PBDC1Q9BVG4 233 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 GGTLC1Q9BX51 225 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 ZNF436Q9C0F3 470 aaPredicted RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 SLIRPQ9GZT3 109 aaKnown RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 C6orf62Q9GZU0 229 aaPredicted RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 NXF2Q9GZY0 626 aaKnown RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 FXYD6Q9H0Q3 95 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 SLC35B3Q9H1N7 401 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 RBKSQ9H477 322 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 IFT46Q9NQC8 304 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 C8orf4Q9NR00 106 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 TMEM14BQ9NUH8 114 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 SLC2A8Q9NY64 477 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 BET1LQ9NYM9 111 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 C21orf62Q9NYP8 219 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 MRPL27Q9P0M9 148 aaKnown RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 GSKIPQ9P0R6 139 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 DOK5Q9P104 306 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 COPZ2Q9P299 210 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 EXTL2Q9UBQ6 330 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 MTFP1Q9UDX5 166 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 BLOC1S6Q9UL45 172 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 APLNQ9ULZ1 77 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 ZNF257Q9Y2Q1 563 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 PRELID3BQ9Y3B1 194 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 PUS1Q9Y606 427 aaKnown RBP eCLIP0.71□□□□□ -2.3
SMG1-212ENST00000566328 F11RQ9Y624 299 aaKnown RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 MUC2Q02817 5179 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms