RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 C18orf15Q96N68 181 aa8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 FAM210AQ96ND0 272 aa8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 MUC4Q99102 2169 aa8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 NPCDR1Q9BY65 106 aa8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 AAMDCQ9H7C9 122 aa8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 Q9H8V8 135 aa8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 KCNIP2Q9NS61 270 aa8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 PKD1P98161 4303 aa8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 TRAV26-1A0A087WT03 109 aa8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 C7orf71A4D174 169 aa8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 KLLNB2CW77 178 aa8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 E5RGE8 158 aa8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 ZNF324O75467 553 aaPredicted RBP8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 NDUFB4O95168 129 aa8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 ANXA2RQ3ZCQ2 193 aa8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 C9orf47Q6ZRZ4 202 aa8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 FAM19A4Q96LR4 140 aa8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 MARVELD1Q9BSK0 173 aa8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 PARD6GQ9BYG4 376 aaPredicted RBP8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 NMES1Q9C002 83 aa8.49□□□□□ -1.05
GTF3C1-204ENST00000564664 DNAH11Q96DT5 4516 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 TRBV7-9A0A0J9YWB2 115 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 A0A1W2PPQ1 181 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 PRAF2O60831 178 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 GAGE7O76087 117 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 GAGE12FP0CL80 117 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 GAGE12GP0CL81 117 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 GAGE12IP0CL82 117 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 CRISP2P16562 243 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 TTC32Q5I0X7 151 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 EIF4E3Q8N5X7 224 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 UPK3BQ9BT76 320 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 AGPAT4-IT1Q9H0P7 198 aa8.48□□□□□ -1.05
GTF3C1-204ENST00000564664 M0R3E3 92 aa8.47□□□□□ -1.05
GTF3C1-204ENST00000564664 GPX1P07203 203 aa8.47□□□□□ -1.05
GTF3C1-204ENST00000564664 NBEAP1P0C6P0 100 aa8.47□□□□□ -1.05
GTF3C1-204ENST00000564664 PRB4P10163 310 aaPredicted RBP8.47□□□□□ -1.05
GTF3C1-204ENST00000564664 NHLH2Q02577 135 aa8.47□□□□□ -1.05
GTF3C1-204ENST00000564664 TMEM78Q5T7P6 136 aa8.47□□□□□ -1.05
GTF3C1-204ENST00000564664 OR5C1Q8NGR4 320 aa8.47□□□□□ -1.05
GTF3C1-204ENST00000564664 ENKURQ8TC29 256 aa8.47□□□□□ -1.05
GTF3C1-204ENST00000564664 MRPL32Q9BYC8 188 aaKnown RBP8.47□□□□□ -1.05
GTF3C1-204ENST00000564664 OR51M1Q9H341 326 aa8.47□□□□□ -1.05
GTF3C1-204ENST00000564664 DYNC1H1Q14204 4646 aaKnown RBP8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 TRGV2A0A075B6R0 118 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 C17orf112F2Z3M2 114 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 J3KRW8 73 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 PYYP10082 97 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 HOXA5P20719 270 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 RNASE4P34096 147 aaKnown RBP8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 TNP2Q05952 138 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 ERCC8Q13216 396 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 SLAQ13239 276 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 IBA57Q5T440 356 aaKnown RBP8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 LYPD1Q8N2G4 141 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 C11orf72Q8NBR9 251 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 BLNKQ8WV28 456 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 FAM167A-AS1Q96KT0 104 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 SLC25A2Q9BXI2 301 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 ZNF492Q9P255 531 aa8.46□□□□□ -1.06
GTF3C1-204ENST00000564664 A0A0J9YY99 117 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 SPINK4O60575 86 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 CD300CQ08708 224 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 ICAM4Q14773 271 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 ESRGQ1W209 222 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 GCSAMLQ5JQS6 135 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 Q6ZTI0 123 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 TCTE3Q8IZS6 198 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 EXOC3-AS1Q8N2X6 119 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 THAP6Q8TBB0 222 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 PAXXQ9BUH6 204 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 WDR61Q9GZS3 305 aaKnown RBP8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 Q9H3A6 140 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 GSN-AS1Q9NRJ2 163 aa8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 MRPS16Q9Y3D3 137 aaKnown RBP8.45□□□□□ -1.06
GTF3C1-204ENST00000564664 RBAKDNA6NC62 111 aa8.44□□□□□ -1.06
GTF3C1-204ENST00000564664 INMT-MINDY4F8WBC2 141 aa8.44□□□□□ -1.06
GTF3C1-204ENST00000564664 RGS13O14921 159 aa8.44□□□□□ -1.06
GTF3C1-204ENST00000564664 CSN1S1P47710 185 aa8.44□□□□□ -1.06
GTF3C1-204ENST00000564664 TCL1AP56279 114 aa8.44□□□□□ -1.06
GTF3C1-204ENST00000564664 MIR17HGQ75NE6 70 aa8.44□□□□□ -1.06
GTF3C1-204ENST00000564664 TMPRSS5Q9H3S3 457 aa8.44□□□□□ -1.06
GTF3C1-204ENST00000564664 FUT9Q9Y231 359 aa8.44□□□□□ -1.06
GTF3C1-204ENST00000564664 RYR1P21817 5038 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 TRGV1A0A0A0MS02 117 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 C16orf90A8MZG2 172 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 CDK2AP2O75956 126 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 SIX6O95475 246 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 PET100P0DJ07 73 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 ZNF138P52744 262 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 BTN1A1Q13410 526 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 NDUFA5Q16718 116 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 FAM122CQ6P4D5 195 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 ZNF575Q86XF7 245 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 ZFAND2AQ8N6M9 145 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 FXYD5Q96DB9 178 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 ST6GAL2Q96JF0 529 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 VGLL1Q99990 258 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 2262.2 ms