RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 Q8NAQ8 132 aa13.64□□□□□ -0.23
NME3-207ENST00000564628 SLC35B3Q9H1N7 401 aa13.64□□□□□ -0.23
NME3-207ENST00000564628 TMEM167BQ9NRX6 74 aa13.64□□□□□ -0.23
NME3-207ENST00000564628 XCL2Q9UBD3 114 aa13.64□□□□□ -0.23
NME3-207ENST00000564628 APLNQ9ULZ1 77 aa13.64□□□□□ -0.23
NME3-207ENST00000564628 TRBV19A0A075B6N1 114 aa13.63□□□□□ -0.23
NME3-207ENST00000564628 A0A1B0GV50 99 aa13.63□□□□□ -0.23
NME3-207ENST00000564628 HMGB3O15347 200 aaKnown RBP13.63□□□□□ -0.23
NME3-207ENST00000564628 HIST1H1EP10412 219 aaKnown RBP13.63□□□□□ -0.23
NME3-207ENST00000564628 FGF8P55075 233 aaPredicted RBP13.63□□□□□ -0.23
NME3-207ENST00000564628 COMMD7Q86VX2 200 aa13.63□□□□□ -0.23
NME3-207ENST00000564628 IQCF2Q8IXL9 164 aa13.63□□□□□ -0.23
NME3-207ENST00000564628 OR8A1Q8NGG7 326 aa13.63□□□□□ -0.23
NME3-207ENST00000564628 RPUSD4Q96CM3 377 aaKnown RBP13.63□□□□□ -0.23
NME3-207ENST00000564628 DNAH6Q9C0G6 4158 aa13.63□□□□□ -0.23
NME3-207ENST00000564628 OR7C2O60412 319 aa13.62□□□□□ -0.23
NME3-207ENST00000564628 NDUFB4O95168 129 aa13.62□□□□□ -0.23
NME3-207ENST00000564628 ARL14EPLP0DKL9 152 aa13.62□□□□□ -0.23
NME3-207ENST00000564628 PYYP10082 97 aa13.62□□□□□ -0.23
NME3-207ENST00000564628 PDE6HQ13956 83 aa13.62□□□□□ -0.23
NME3-207ENST00000564628 ZNF705AQ6ZN79 300 aaPredicted RBP13.62□□□□□ -0.23
NME3-207ENST00000564628 OR51M1Q9H341 326 aa13.62□□□□□ -0.23
NME3-207ENST00000564628 SMDT1Q9H4I9 107 aa13.62□□□□□ -0.23
NME3-207ENST00000564628 DEFB4AO15263 64 aa13.61□□□□□ -0.23
NME3-207ENST00000564628 ZNF705DP0CH99 300 aaPredicted RBP13.61□□□□□ -0.23
NME3-207ENST00000564628 ZNF705BP0CI00 300 aaPredicted RBP13.61□□□□□ -0.23
NME3-207ENST00000564628 MIFP14174 115 aa13.61□□□□□ -0.23
NME3-207ENST00000564628 GCHFRP30047 84 aa13.61□□□□□ -0.23
NME3-207ENST00000564628 FXYD7P58549 80 aa13.61□□□□□ -0.23
NME3-207ENST00000564628 CCL20P78556 96 aa13.61□□□□□ -0.23
NME3-207ENST00000564628 PEA15Q15121 130 aa13.61□□□□□ -0.23
NME3-207ENST00000564628 PAXXQ9BUH6 204 aa13.61□□□□□ -0.23
NME3-207ENST00000564628 MANBALQ9NQG1 85 aa13.61□□□□□ -0.23
NME3-207ENST00000564628 RBFOX3A6NFN3 312 aa13.6□□□□□ -0.23
NME3-207ENST00000564628 ZNF705FA8MVS1 300 aaPredicted RBP13.6□□□□□ -0.23
NME3-207ENST00000564628 IGLL5B9A064 214 aa13.6□□□□□ -0.23
NME3-207ENST00000564628 UQCC3Q6UW78 93 aa13.6□□□□□ -0.23
NME3-207ENST00000564628 EIF4E3Q8N5X7 224 aaKnown RBP13.6□□□□□ -0.23
NME3-207ENST00000564628 FXYD5Q96DB9 178 aa13.6□□□□□ -0.23
NME3-207ENST00000564628 FAM210AQ96ND0 272 aa13.6□□□□□ -0.23
NME3-207ENST00000564628 EIF5A2Q9GZV4 153 aaKnown RBP13.6□□□□□ -0.23
NME3-207ENST00000564628 IGHV4-28A0A0C4DH34 117 aa13.59□□□□□ -0.23
NME3-207ENST00000564628 PRAC2D3DTV9 90 aa13.59□□□□□ -0.23
NME3-207ENST00000564628 EIF3GO75821 320 aaKnown RBP eCLIP13.59□□□□□ -0.23
NME3-207ENST00000564628 RBMY1A1P0DJD3 496 aaKnown RBP13.59□□□□□ -0.23
NME3-207ENST00000564628 RBMY1CP0DJD4 496 aa13.59□□□□□ -0.23
NME3-207ENST00000564628 HIST1H1AQ02539 215 aaPredicted RBP13.59□□□□□ -0.23
NME3-207ENST00000564628 RBMY1FQ15415 496 aaKnown RBP13.59□□□□□ -0.23
NME3-207ENST00000564628 LINC00336Q6ZUF6 198 aa13.59□□□□□ -0.23
NME3-207ENST00000564628 SLC7A5P1Q8MH63 180 aa13.59□□□□□ -0.23
NME3-207ENST00000564628 MRPL53Q96EL3 112 aaKnown RBP13.59□□□□□ -0.23
NME3-207ENST00000564628 ZNF503Q96F45 646 aa13.59□□□□□ -0.23
NME3-207ENST00000564628 NEU1Q99519 415 aa13.59□□□□□ -0.23
NME3-207ENST00000564628 TXNDC17Q9BRA2 123 aa13.59□□□□□ -0.23
NME3-207ENST00000564628 GNG13Q9P2W3 67 aa13.59□□□□□ -0.23
NME3-207ENST00000564628 AMBPP02760 352 aa13.58□□□□□ -0.24
NME3-207ENST00000564628 IGF2BP2-AS1Q96M15 143 aa13.58□□□□□ -0.24
NME3-207ENST00000564628 TMPRSS5Q9H3S3 457 aa13.58□□□□□ -0.24
NME3-207ENST00000564628 CRXO43186 299 aaPredicted RBP13.57□□□□□ -0.24
NME3-207ENST00000564628 UBE2L3P68036 154 aaKnown RBP13.57□□□□□ -0.24
NME3-207ENST00000564628 SPINK13Q1W4C9 94 aa13.57□□□□□ -0.24
NME3-207ENST00000564628 C1orf158Q8N1D5 194 aa13.57□□□□□ -0.24
NME3-207ENST00000564628 SUN5Q8TC36 379 aa13.57□□□□□ -0.24
NME3-207ENST00000564628 NKX6-2Q9C056 277 aaPredicted RBP13.57□□□□□ -0.24
NME3-207ENST00000564628 VAX2Q9UIW0 290 aa13.57□□□□□ -0.24
NME3-207ENST00000564628 PRELID1Q9Y255 219 aa13.57□□□□□ -0.24
NME3-207ENST00000564628 ARL2-SNX15V9GYD0 113 aa13.57□□□□□ -0.24
NME3-207ENST00000564628 M0R2Z0 102 aa13.56□□□□□ -0.24
NME3-207ENST00000564628 NBEAP1P0C6P0 100 aa13.56□□□□□ -0.24
NME3-207ENST00000564628 PRB4P10163 310 aaPredicted RBP13.56□□□□□ -0.24
NME3-207ENST00000564628 BCL2P10415 239 aa13.56□□□□□ -0.24
NME3-207ENST00000564628 ZNF506Q5JVG8 444 aa13.56□□□□□ -0.24
NME3-207ENST00000564628 BLNKQ8WV28 456 aa13.56□□□□□ -0.24
NME3-207ENST00000564628 TRAV10A0A0B4J240 114 aa13.55□□□□□ -0.24
NME3-207ENST00000564628 LOC102723971A0A1B0GUV8 181 aa13.55□□□□□ -0.24
NME3-207ENST00000564628 A0A1W2PRE2 83 aa13.55□□□□□ -0.24
NME3-207ENST00000564628 SMIM9A6NGZ8 99 aa13.55□□□□□ -0.24
NME3-207ENST00000564628 NPIPB6E9PJ23 425 aa13.55□□□□□ -0.24
NME3-207ENST00000564628 M0R3E3 92 aa13.55□□□□□ -0.24
NME3-207ENST00000564628 NDUFS6O75380 124 aaKnown RBP13.55□□□□□ -0.24
NME3-207ENST00000564628 OR10J4P0C629 311 aa13.55□□□□□ -0.24
NME3-207ENST00000564628 TOR2AQ5JU69 321 aa13.55□□□□□ -0.24
NME3-207ENST00000564628 TREM1Q9NP99 234 aa13.55□□□□□ -0.24
NME3-207ENST00000564628 GOLT1BQ9Y3E0 138 aa13.55□□□□□ -0.24
NME3-207ENST00000564628 PAGE4O60829 102 aa13.54□□□□□ -0.24
NME3-207ENST00000564628 INSP01308 110 aa13.54□□□□□ -0.24
NME3-207ENST00000564628 CST9LP1Q5W188 147 aa13.54□□□□□ -0.24
NME3-207ENST00000564628 EXOC3-AS1Q8N2X6 119 aa13.54□□□□□ -0.24
NME3-207ENST00000564628 OR10J6PQ8NGY7 276 aa13.54□□□□□ -0.24
NME3-207ENST00000564628 ODF3Q96PU9 254 aa13.54□□□□□ -0.24
NME3-207ENST00000564628 IGHV4-4A0A075B6R2 117 aa13.53□□□□□ -0.24
NME3-207ENST00000564628 Q6ZTC4 211 aa13.53□□□□□ -0.24
NME3-207ENST00000564628 AAMDCQ9H7C9 122 aa13.53□□□□□ -0.24
NME3-207ENST00000564628 FAT2Q9NYQ8 4349 aa13.53□□□□□ -0.24
NME3-207ENST00000564628 A0A1B0GVY2 172 aa13.52□□□□□ -0.25
NME3-207ENST00000564628 UBE2G2P60604 165 aa13.52□□□□□ -0.25
NME3-207ENST00000564628 MEF2BQ02080 365 aaPredicted RBP13.52□□□□□ -0.25
NME3-207ENST00000564628 ICAM4Q14773 271 aa13.52□□□□□ -0.25
NME3-207ENST00000564628 LYPD1Q8N2G4 141 aa13.52□□□□□ -0.25
NME3-207ENST00000564628 RXFP4Q8TDU9 374 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms