RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ACTR3CQ9C0K3 210 aaPredicted RBP14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 DKK2Q9UBU2 259 aa14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 RPH3ALQ9UNE2 315 aa14.26□□□□□ -0.13
TSPAN3-210ENST00000561277 TRAV12-3A0A0B4J271 114 aa14.25□□□□□ -0.13
TSPAN3-210ENST00000561277 C11orf94C9JXX5 98 aa14.25□□□□□ -0.13
TSPAN3-210ENST00000561277 AZU1P20160 251 aa14.25□□□□□ -0.13
TSPAN3-210ENST00000561277 TAS2R60P59551 318 aa14.25□□□□□ -0.13
TSPAN3-210ENST00000561277 ZNF345Q14585 488 aa14.25□□□□□ -0.13
TSPAN3-210ENST00000561277 C9orf47Q6ZRZ4 202 aa14.25□□□□□ -0.13
TSPAN3-210ENST00000561277 KCNRGQ8N5I3 272 aa14.25□□□□□ -0.13
TSPAN3-210ENST00000561277 RYR2Q92736 4967 aa14.24□□□□□ -0.13
TSPAN3-210ENST00000561277 PGPA6NDG6 321 aa14.24□□□□□ -0.13
TSPAN3-210ENST00000561277 H7BYZ3 331 aa14.24□□□□□ -0.13
TSPAN3-210ENST00000561277 Q8TAT8 98 aa14.24□□□□□ -0.13
TSPAN3-210ENST00000561277 CMTM2Q8TAZ6 248 aa14.24□□□□□ -0.13
TSPAN3-210ENST00000561277 C2CD4CQ8TF44 421 aa14.24□□□□□ -0.13
TSPAN3-210ENST00000561277 ARPC5LQ9BPX5 153 aa14.24□□□□□ -0.13
TSPAN3-210ENST00000561277 OTORQ9NRC9 128 aa14.24□□□□□ -0.13
TSPAN3-210ENST00000561277 TRAV10A0A0B4J240 114 aa14.23□□□□□ -0.13
TSPAN3-210ENST00000561277 TEX48A0A1B0GUV7 120 aa14.23□□□□□ -0.13
TSPAN3-210ENST00000561277 HMSDA8MTL9 139 aa14.23□□□□□ -0.13
TSPAN3-210ENST00000561277 FAM74A1Q5RGS3 127 aa14.23□□□□□ -0.13
TSPAN3-210ENST00000561277 AKR1C8PQ5T2L2 129 aa14.23□□□□□ -0.13
TSPAN3-210ENST00000561277 SSX7Q7RTT5 188 aa14.23□□□□□ -0.13
TSPAN3-210ENST00000561277 IQCF2Q8IXL9 164 aa14.23□□□□□ -0.13
TSPAN3-210ENST00000561277 C20orf144Q9BQM9 153 aa14.23□□□□□ -0.13
TSPAN3-210ENST00000561277 PLA2G2EQ9NZK7 142 aa14.23□□□□□ -0.13
TSPAN3-210ENST00000561277 GCHFRP30047 84 aa14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 BTN1A1Q13410 526 aa14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 Q6ZNX1 250 aa14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 RXFP4Q8TDU9 374 aa14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 FAM19A4Q96LR4 140 aa14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 NIPSNAP3BQ9BS92 247 aa14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 IGLL5B9A064 214 aa14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 DIRC3C9JPN6 131 aa14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 CXorf1O96002 111 aa14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 SLC25A5P05141 298 aaKnown RBP14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 ZNF138P52744 262 aa14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 ZNF492Q9P255 531 aa14.22□□□□□ -0.13
TSPAN3-210ENST00000561277 hCG_2014768A0A024R1R8 64 aa14.21□□□□□ -0.14
TSPAN3-210ENST00000561277 DEFB131BA0A096LNP1 70 aa14.21□□□□□ -0.14
TSPAN3-210ENST00000561277 C7orf71A4D174 169 aa14.21□□□□□ -0.14
TSPAN3-210ENST00000561277 RBAKDNA6NC62 111 aa14.21□□□□□ -0.14
TSPAN3-210ENST00000561277 KLLNB2CW77 178 aa14.21□□□□□ -0.14
TSPAN3-210ENST00000561277 CD300CQ08708 224 aa14.21□□□□□ -0.14
TSPAN3-210ENST00000561277 ZNF726P1Q15940 193 aa14.21□□□□□ -0.14
TSPAN3-210ENST00000561277 C16orf74Q96GX8 76 aa14.21□□□□□ -0.14
TSPAN3-210ENST00000561277 ST6GAL2Q96JF0 529 aa14.21□□□□□ -0.14
TSPAN3-210ENST00000561277 A0A0D9SG52 128 aa14.2□□□□□ -0.14
TSPAN3-210ENST00000561277 KANTRA0A1W2PQU2 76 aa14.2□□□□□ -0.14
TSPAN3-210ENST00000561277 PLAC8L1A1L4L8 177 aa14.2□□□□□ -0.14
TSPAN3-210ENST00000561277 GPX1P07203 203 aa14.2□□□□□ -0.14
TSPAN3-210ENST00000561277 CRISP2P16562 243 aa14.2□□□□□ -0.14
TSPAN3-210ENST00000561277 RNASE4P34096 147 aaKnown RBP14.2□□□□□ -0.14
TSPAN3-210ENST00000561277 GNG5P63218 68 aa14.2□□□□□ -0.14
TSPAN3-210ENST00000561277 CTXND1A0A1B0GTU2 59 aa14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 BCL2L11O43521 198 aa14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 PRR9Q5T870 116 aa14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 GOLT1AQ6ZVE7 132 aa14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 CCDC28AQ8IWP9 274 aa14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 ZFAND2AQ8N6M9 145 aa14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 RNASE8Q8TDE3 154 aaKnown RBP14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 TMEM263Q8WUH6 116 aaKnown RBP14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 LINC00476Q8WZB0 136 aa14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 ZNF471Q9BX82 626 aaPredicted RBP14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 TMEM167BQ9NRX6 74 aa14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 ALMS1Q8TCU4 4167 aa14.19□□□□□ -0.14
TSPAN3-210ENST00000561277 LY6G6CO95867 125 aa14.18□□□□□ -0.14
TSPAN3-210ENST00000561277 DAD1P61803 113 aa14.18□□□□□ -0.14
TSPAN3-210ENST00000561277 LYRM9A8MSI8 78 aa14.17□□□□□ -0.14
TSPAN3-210ENST00000561277 PFDN1O60925 122 aa14.17□□□□□ -0.14
TSPAN3-210ENST00000561277 HTN3P15516 51 aa14.17□□□□□ -0.14
TSPAN3-210ENST00000561277 FGF8P55075 233 aaPredicted RBP14.17□□□□□ -0.14
TSPAN3-210ENST00000561277 SUN5Q8TC36 379 aa14.17□□□□□ -0.14
TSPAN3-210ENST00000561277 PYGO2Q9BRQ0 406 aa14.17□□□□□ -0.14
TSPAN3-210ENST00000561277 NMBP08949 121 aa14.17□□□□□ -0.14
TSPAN3-210ENST00000561277 DEFB130BP0DP73 79 aa14.17□□□□□ -0.14
TSPAN3-210ENST00000561277 DEFB130AP0DP74 79 aa14.17□□□□□ -0.14
TSPAN3-210ENST00000561277 ZNF493Q6ZR52 646 aa14.17□□□□□ -0.14
TSPAN3-210ENST00000561277 HYDINQ4G0P3 5121 aa14.17□□□□□ -0.14
TSPAN3-210ENST00000561277 IGHV4-4A0A075B6R2 117 aa14.16□□□□□ -0.14
TSPAN3-210ENST00000561277 ZNF324O75467 553 aaPredicted RBP14.16□□□□□ -0.14
TSPAN3-210ENST00000561277 TMUB2Q71RG4 321 aa14.16□□□□□ -0.14
TSPAN3-210ENST00000561277 TCTE3Q8IZS6 198 aa14.16□□□□□ -0.14
TSPAN3-210ENST00000561277 TMPRSS5Q9H3S3 457 aa14.16□□□□□ -0.14
TSPAN3-210ENST00000561277 NOP10Q9NPE3 64 aaKnown RBP14.16□□□□□ -0.14
TSPAN3-210ENST00000561277 TIMM8BQ9Y5J9 83 aaPredicted RBP14.16□□□□□ -0.14
TSPAN3-210ENST00000561277 DNAH1Q9P2D7 4330 aa14.15□□□□□ -0.14
TSPAN3-210ENST00000561277 TRAV8-1A0A0A6YYK1 113 aa14.15□□□□□ -0.14
TSPAN3-210ENST00000561277 GGTLC3B5MD39 225 aa14.15□□□□□ -0.14
TSPAN3-210ENST00000561277 Q6ZQT7 251 aa14.15□□□□□ -0.14
TSPAN3-210ENST00000561277 C5orf17Q8NAS9 161 aa14.15□□□□□ -0.14
TSPAN3-210ENST00000561277 TRBV7-9A0A0J9YWB2 115 aa14.14□□□□□ -0.15
TSPAN3-210ENST00000561277 MAP1LC3B2A6NCE7 125 aa14.14□□□□□ -0.15
TSPAN3-210ENST00000561277 FHITP49789 147 aa14.14□□□□□ -0.15
TSPAN3-210ENST00000561277 SUMO1P63165 101 aaKnown RBP14.14□□□□□ -0.15
TSPAN3-210ENST00000561277 SGK494Q96LW2 274 aa14.14□□□□□ -0.15
TSPAN3-210ENST00000561277 MAP1LC3BQ9GZQ8 125 aa14.14□□□□□ -0.15
TSPAN3-210ENST00000561277 CBY3A6NI87 242 aa14.13□□□□□ -0.15
TSPAN3-210ENST00000561277 RGS13O14921 159 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 334.6 ms