RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 CT45A10P0DMU9 189 aa7.14□□□□□ -1.27
USP3-207ENST00000558218 ATP5G3P48201 142 aa7.14□□□□□ -1.27
USP3-207ENST00000558218 H2BFSP57053 126 aa7.14□□□□□ -1.27
USP3-207ENST00000558218 RNASE8Q8TDE3 154 aaKnown RBP7.14□□□□□ -1.27
USP3-207ENST00000558218 PYGO2Q9BRQ0 406 aa7.14□□□□□ -1.27
USP3-207ENST00000558218 OR5AC2Q9NZP5 309 aa7.14□□□□□ -1.27
USP3-207ENST00000558218 TRBV7-9A0A0J9YWB2 115 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 PRAC2D3DTV9 90 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 H3BTX0 84 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 SSNA1O43805 119 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 NDUFB4O95168 129 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 MPC2O95563 127 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 PRM2P04554 102 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 SNRPCP09234 159 aaKnown RBP7.13□□□□□ -1.27
USP3-207ENST00000558218 NBEAP1P0C6P0 100 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 DEFB130BP0DP73 79 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 DEFB130AP0DP74 79 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 HTN3P15516 51 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 LRRC37A5PQ49AS3 106 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 GFI1BQ5VTD9 330 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 C9orf47Q6ZRZ4 202 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 LYPD1Q8N2G4 141 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 LINC00612Q8N6U2 182 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 FAM167A-AS1Q96KT0 104 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 ATP5SQ99766 215 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 LINC00467Q9BRT7 94 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 PARD6GQ9BYG4 376 aaPredicted RBP7.13□□□□□ -1.27
USP3-207ENST00000558218 KRTAP4-2Q9BYR5 136 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 OR51M1Q9H341 326 aa7.13□□□□□ -1.27
USP3-207ENST00000558218 KMT2AQ03164 3969 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 KLLNB2CW77 178 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 IFNA5P01569 189 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 HTN1P15515 57 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 CRISP2P16562 243 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 DAZ2Q13117 558 aaKnown RBP7.12□□□□□ -1.27
USP3-207ENST00000558218 CLINT1Q14677 625 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 TMEM88Q6PEY1 159 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 UBE2DNLQ8IWF7 75 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 THAP6Q8TBB0 222 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 SCGB1C1Q8TD33 95 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 FAM19A4Q96LR4 140 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 SLC25A2Q9BXI2 301 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 FUT9Q9Y231 359 aa7.12□□□□□ -1.27
USP3-207ENST00000558218 SNURFLB1AK76 121 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 F5H768 121 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 H3BNG1 76 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 PYYP10082 97 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 RPL12P30050 165 aaKnown RBP7.11□□□□□ -1.27
USP3-207ENST00000558218 FCN2Q15485 313 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 GCSAMLQ5JQS6 135 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 MIR17HGQ75NE6 70 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 ZNF680Q8NEM1 530 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 FXYD5Q96DB9 178 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 ZNF503Q96F45 646 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 C18orf15Q96N68 181 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 PAXXQ9BUH6 204 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 AGPAT4-IT1Q9H0P7 198 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 NOP10Q9NPE3 64 aaKnown RBP7.11□□□□□ -1.27
USP3-207ENST00000558218 HSPB11Q9Y547 144 aa7.11□□□□□ -1.27
USP3-207ENST00000558218 TRAV12-3A0A0B4J271 114 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 C7orf71A4D174 169 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 RBAKDNA6NC62 111 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 M0R3E3 92 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 ZNF324O75467 553 aaPredicted RBP7.1□□□□□ -1.27
USP3-207ENST00000558218 CSN1S1P47710 185 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 TAS2R45P59539 299 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 ICAM4Q14773 271 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 ANXA2RQ3ZCQ2 193 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 SOHLH1Q5JUK2 328 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 TMEM78Q5T7P6 136 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 Q6ZR54 194 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 EXOC3-AS1Q8N2X6 119 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 ARL6IP6Q8N6S5 226 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 RXFP4Q8TDU9 374 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 BLNKQ8WV28 456 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 ZNF492Q9P255 531 aa7.1□□□□□ -1.27
USP3-207ENST00000558218 GPX1P07203 203 aa7.09□□□□□ -1.27
USP3-207ENST00000558218 CCL18P55774 89 aa7.09□□□□□ -1.27
USP3-207ENST00000558218 ASB13Q8WXK3 278 aa7.09□□□□□ -1.27
USP3-207ENST00000558218 ATG101Q9BSB4 218 aa7.09□□□□□ -1.27
USP3-207ENST00000558218 LENEPQ9Y5L5 61 aa7.09□□□□□ -1.27
USP3-207ENST00000558218 OR7C2O60412 319 aa7.08□□□□□ -1.28
USP3-207ENST00000558218 PTTG1O95997 202 aa7.08□□□□□ -1.28
USP3-207ENST00000558218 M6PRP20645 277 aa7.08□□□□□ -1.28
USP3-207ENST00000558218 ZNF138P52744 262 aa7.08□□□□□ -1.28
USP3-207ENST00000558218 ERCC8Q13216 396 aa7.08□□□□□ -1.28
USP3-207ENST00000558218 ACOT6Q3I5F7 207 aaPredicted RBP7.08□□□□□ -1.28
USP3-207ENST00000558218 KHDC3LQ587J8 217 aa7.08□□□□□ -1.28
USP3-207ENST00000558218 FFAR4Q5NUL3 377 aa7.08□□□□□ -1.28
USP3-207ENST00000558218 FAM74A1Q5RGS3 127 aa7.08□□□□□ -1.28
USP3-207ENST00000558218 IBA57Q5T440 356 aaKnown RBP7.08□□□□□ -1.28
USP3-207ENST00000558218 EIF4E3Q8N5X7 224 aaKnown RBP7.08□□□□□ -1.28
USP3-207ENST00000558218 TMED6Q8WW62 240 aa7.08□□□□□ -1.28
USP3-207ENST00000558218 MBD2Q9UBB5 411 aa7.08□□□□□ -1.28
USP3-207ENST00000558218 VPS13DQ5THJ4 4388 aa7.08□□□□□ -1.28
USP3-207ENST00000558218 OR10J4P0C629 311 aa7.07□□□□□ -1.28
USP3-207ENST00000558218 PRB4P10163 310 aaPredicted RBP7.07□□□□□ -1.28
USP3-207ENST00000558218 RNASE4P34096 147 aaKnown RBP7.07□□□□□ -1.28
USP3-207ENST00000558218 RANP62826 216 aaKnown RBP7.07□□□□□ -1.28
USP3-207ENST00000558218 CD300CQ08708 224 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms