RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 SUN5Q8TC36 379 aa10.38□□□□□ -0.75
USP3-205ENST00000557884 TMEM208Q9BTX3 173 aa10.38□□□□□ -0.75
USP3-205ENST00000557884 CSMD3Q7Z407 3707 aa10.37□□□□□ -0.75
USP3-205ENST00000557884 DIRC3C9JPN6 131 aa10.37□□□□□ -0.75
USP3-205ENST00000557884 SLC25A5P05141 298 aaKnown RBP10.37□□□□□ -0.75
USP3-205ENST00000557884 RBMY1A1P0DJD3 496 aaKnown RBP10.37□□□□□ -0.75
USP3-205ENST00000557884 RBMY1CP0DJD4 496 aa10.37□□□□□ -0.75
USP3-205ENST00000557884 TSPOP30536 169 aa10.37□□□□□ -0.75
USP3-205ENST00000557884 LEPP41159 167 aa10.37□□□□□ -0.75
USP3-205ENST00000557884 CDKN1BP46527 198 aa10.37□□□□□ -0.75
USP3-205ENST00000557884 UBE2G2P60604 165 aa10.37□□□□□ -0.75
USP3-205ENST00000557884 RBMY1FQ15415 496 aaKnown RBP10.37□□□□□ -0.75
USP3-205ENST00000557884 FAM74A1Q5RGS3 127 aa10.37□□□□□ -0.75
USP3-205ENST00000557884 TMEM78Q5T7P6 136 aa10.37□□□□□ -0.75
USP3-205ENST00000557884 ZNF705AQ6ZN79 300 aaPredicted RBP10.37□□□□□ -0.75
USP3-205ENST00000557884 Q8TAT8 98 aa10.37□□□□□ -0.75
USP3-205ENST00000557884 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
USP3-205ENST00000557884 GGTLC3B5MD39 225 aa10.36□□□□□ -0.75
USP3-205ENST00000557884 PRM2P04554 102 aa10.36□□□□□ -0.75
USP3-205ENST00000557884 MIFP14174 115 aa10.36□□□□□ -0.75
USP3-205ENST00000557884 GFI1BQ5VTD9 330 aa10.36□□□□□ -0.75
USP3-205ENST00000557884 C9orf47Q6ZRZ4 202 aa10.36□□□□□ -0.75
USP3-205ENST00000557884 GOLT1AQ6ZVE7 132 aa10.36□□□□□ -0.75
USP3-205ENST00000557884 MUC7Q8TAX7 377 aa10.36□□□□□ -0.75
USP3-205ENST00000557884 RXFP4Q8TDU9 374 aa10.36□□□□□ -0.75
USP3-205ENST00000557884 SFT2D1Q8WV19 159 aa10.36□□□□□ -0.75
USP3-205ENST00000557884 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
USP3-205ENST00000557884 YTHDF2Q9Y5A9 579 aaKnown RBP10.36□□□□□ -0.75
USP3-205ENST00000557884 DYNC2H1Q8NCM8 4307 aaKnown RBP10.35□□□□□ -0.75
USP3-205ENST00000557884 SUMO1P63165 101 aaKnown RBP10.35□□□□□ -0.75
USP3-205ENST00000557884 ZFAND6Q6FIF0 208 aa10.35□□□□□ -0.75
USP3-205ENST00000557884 EIF5AL1Q6IS14 154 aaKnown RBP10.35□□□□□ -0.75
USP3-205ENST00000557884 ODF3Q96PU9 254 aa10.35□□□□□ -0.75
USP3-205ENST00000557884 LINC01587Q99440 93 aa10.35□□□□□ -0.75
USP3-205ENST00000557884 C11orf68Q9H3H3 251 aaKnown RBP10.35□□□□□ -0.75
USP3-205ENST00000557884 ZNF705GA8MUZ8 300 aaPredicted RBP10.34□□□□□ -0.75
USP3-205ENST00000557884 HBE1P02100 147 aa10.34□□□□□ -0.75
USP3-205ENST00000557884 ZNF138P52744 262 aa10.34□□□□□ -0.75
USP3-205ENST00000557884 EMP1P54849 157 aa10.34□□□□□ -0.75
USP3-205ENST00000557884 PMS2P11Q13670 270 aa10.34□□□□□ -0.75
USP3-205ENST00000557884 DPPA3Q6W0C5 159 aa10.34□□□□□ -0.75
USP3-205ENST00000557884 C5orf17Q8NAS9 161 aa10.34□□□□□ -0.75
USP3-205ENST00000557884 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
USP3-205ENST00000557884 MBD3L1Q8WWY6 194 aa10.34□□□□□ -0.75
USP3-205ENST00000557884 ZNF492Q9P255 531 aa10.34□□□□□ -0.75
USP3-205ENST00000557884 TRAV8-1A0A0A6YYK1 113 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 TRAV12-3A0A0B4J271 114 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 A0A1W2PRE2 83 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 RBAKDNA6NC62 111 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 FAM74A7A6NL05 159 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 H2AFB1P0C5Y9 115 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 HTN1P15515 57 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 RNASE4P34096 147 aaKnown RBP10.33□□□□□ -0.76
USP3-205ENST00000557884 BTN1A1Q13410 526 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 PRR9Q5T870 116 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 FAM19A4Q96LR4 140 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 SGK494Q96LW2 274 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 NEU1Q99519 415 aa10.33□□□□□ -0.76
USP3-205ENST00000557884 PLECQ15149 4684 aaKnown RBP10.32□□□□□ -0.76
USP3-205ENST00000557884 LOC102723971A0A1B0GUV8 181 aa10.32□□□□□ -0.76
USP3-205ENST00000557884 C7orf71A4D174 169 aa10.32□□□□□ -0.76
USP3-205ENST00000557884 SMIM9A6NGZ8 99 aa10.32□□□□□ -0.76
USP3-205ENST00000557884 IFNA7P01567 189 aa10.32□□□□□ -0.76
USP3-205ENST00000557884 TCRAP04437 139 aa10.32□□□□□ -0.76
USP3-205ENST00000557884 SULT1A2P50226 295 aa10.32□□□□□ -0.76
USP3-205ENST00000557884 NANOS2P60321 138 aaKnown RBP10.32□□□□□ -0.76
USP3-205ENST00000557884 RRN3P1Q2M238 152 aa10.32□□□□□ -0.76
USP3-205ENST00000557884 ZFAND2AQ8N6M9 145 aa10.32□□□□□ -0.76
USP3-205ENST00000557884 EPDR1Q9UM22 224 aa10.32□□□□□ -0.76
USP3-205ENST00000557884 CXorf65A6NEN9 183 aa10.31□□□□□ -0.76
USP3-205ENST00000557884 KLLNB2CW77 178 aa10.31□□□□□ -0.76
USP3-205ENST00000557884 GPX1P07203 203 aa10.31□□□□□ -0.76
USP3-205ENST00000557884 CRISP2P16562 243 aa10.31□□□□□ -0.76
USP3-205ENST00000557884 RAB5CP51148 216 aa10.31□□□□□ -0.76
USP3-205ENST00000557884 CST9LP1Q5W188 147 aa10.31□□□□□ -0.76
USP3-205ENST00000557884 TMEM256Q8N2U0 113 aa10.31□□□□□ -0.76
USP3-205ENST00000557884 ARL6IP6Q8N6S5 226 aa10.31□□□□□ -0.76
USP3-205ENST00000557884 C11orf45Q8TAV5 145 aa10.31□□□□□ -0.76
USP3-205ENST00000557884 NIPSNAP3BQ9BS92 247 aa10.31□□□□□ -0.76
USP3-205ENST00000557884 CELA1Q9UNI1 258 aa10.31□□□□□ -0.76
USP3-205ENST00000557884 C3orf84H3BNL1 204 aa10.3□□□□□ -0.76
USP3-205ENST00000557884 H7BYZ3 331 aa10.3□□□□□ -0.76
USP3-205ENST00000557884 PAGE4O60829 102 aa10.3□□□□□ -0.76
USP3-205ENST00000557884 AZU1P20160 251 aa10.3□□□□□ -0.76
USP3-205ENST00000557884 TAS2R60P59551 318 aa10.3□□□□□ -0.76
USP3-205ENST00000557884 CCL20P78556 96 aa10.3□□□□□ -0.76
USP3-205ENST00000557884 ALKAL2Q6UX46 152 aa10.3□□□□□ -0.76
USP3-205ENST00000557884 Q6ZQT7 251 aa10.3□□□□□ -0.76
USP3-205ENST00000557884 ZNF767PQ75MW2 155 aa10.3□□□□□ -0.76
USP3-205ENST00000557884 C20orf144Q9BQM9 153 aa10.3□□□□□ -0.76
USP3-205ENST00000557884 TRAV34A0A0B4J273 112 aa10.29□□□□□ -0.76
USP3-205ENST00000557884 K7EQM0 130 aa10.29□□□□□ -0.76
USP3-205ENST00000557884 PEX7O00628 323 aa10.29□□□□□ -0.76
USP3-205ENST00000557884 ATP5G3P48201 142 aa10.29□□□□□ -0.76
USP3-205ENST00000557884 CYB561D1Q8N8Q1 229 aa10.29□□□□□ -0.76
USP3-205ENST00000557884 LINC00479Q96M42 142 aa10.29□□□□□ -0.76
USP3-205ENST00000557884 ATG101Q9BSB4 218 aa10.29□□□□□ -0.76
USP3-205ENST00000557884 SERTM2A0A1B0GWG4 89 aa10.28□□□□□ -0.76
USP3-205ENST00000557884 TMEM189A5PLL7 270 aa10.28□□□□□ -0.76
USP3-205ENST00000557884 F6UZH7 168 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms