RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 Q9H8V8 135 aa15.71■□□□□ 0.11
ACTN1-220ENST00000556433 ASAH1Q13510 395 aa15.7■□□□□ 0.1
ACTN1-220ENST00000556433 Q6ZTI0 123 aa15.7■□□□□ 0.1
ACTN1-220ENST00000556433 GSN-AS1Q9NRJ2 163 aa15.7■□□□□ 0.1
ACTN1-220ENST00000556433 SIX6O95475 246 aa15.69■□□□□ 0.1
ACTN1-220ENST00000556433 RNASE4P34096 147 aaKnown RBP15.69■□□□□ 0.1
ACTN1-220ENST00000556433 CD300CQ08708 224 aa15.69■□□□□ 0.1
ACTN1-220ENST00000556433 LINC00299Q6ZSB3 139 aa15.69■□□□□ 0.1
ACTN1-220ENST00000556433 OR5C1Q8NGR4 320 aa15.69■□□□□ 0.1
ACTN1-220ENST00000556433 THAP6Q8TBB0 222 aa15.69■□□□□ 0.1
ACTN1-220ENST00000556433 SLC25A2Q9BXI2 301 aa15.69■□□□□ 0.1
ACTN1-220ENST00000556433 SLC25A31Q9H0C2 315 aa15.69■□□□□ 0.1
ACTN1-220ENST00000556433 TMPRSS5Q9H3S3 457 aa15.69■□□□□ 0.1
ACTN1-220ENST00000556433 AAMDCQ9H7C9 122 aa15.69■□□□□ 0.1
ACTN1-220ENST00000556433 KLLNB2CW77 178 aa15.68■□□□□ 0.1
ACTN1-220ENST00000556433 ZNF324O75467 553 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-220ENST00000556433 BTN1A1Q13410 526 aa15.68■□□□□ 0.1
ACTN1-220ENST00000556433 ICAM4Q14773 271 aa15.68■□□□□ 0.1
ACTN1-220ENST00000556433 ESRGQ1W209 222 aa15.68■□□□□ 0.1
ACTN1-220ENST00000556433 ZNF680Q8NEM1 530 aa15.68■□□□□ 0.1
ACTN1-220ENST00000556433 S100ZQ8WXG8 99 aa15.68■□□□□ 0.1
ACTN1-220ENST00000556433 FAM19A4Q96LR4 140 aa15.68■□□□□ 0.1
ACTN1-220ENST00000556433 RYR1P21817 5038 aa15.67■□□□□ 0.1
ACTN1-220ENST00000556433 TRGV2A0A075B6R0 118 aa15.67■□□□□ 0.1
ACTN1-220ENST00000556433 H3BNG1 76 aa15.67■□□□□ 0.1
ACTN1-220ENST00000556433 MIR17HGQ75NE6 70 aa15.67■□□□□ 0.1
ACTN1-220ENST00000556433 EIF4E3Q8N5X7 224 aaKnown RBP15.67■□□□□ 0.1
ACTN1-220ENST00000556433 C11orf72Q8NBR9 251 aa15.67■□□□□ 0.1
ACTN1-220ENST00000556433 ENKURQ8TC29 256 aa15.67■□□□□ 0.1
ACTN1-220ENST00000556433 FAM167A-AS1Q96KT0 104 aa15.67■□□□□ 0.1
ACTN1-220ENST00000556433 C16orf90A8MZG2 172 aa15.66■□□□□ 0.1
ACTN1-220ENST00000556433 E5RGE8 158 aa15.66■□□□□ 0.1
ACTN1-220ENST00000556433 GPX1P07203 203 aa15.66■□□□□ 0.1
ACTN1-220ENST00000556433 NBEAP1P0C6P0 100 aa15.66■□□□□ 0.1
ACTN1-220ENST00000556433 FAM122CQ6P4D5 195 aa15.66■□□□□ 0.1
ACTN1-220ENST00000556433 C9orf47Q6ZRZ4 202 aa15.66■□□□□ 0.1
ACTN1-220ENST00000556433 LINC00467Q9BRT7 94 aa15.66■□□□□ 0.1
ACTN1-220ENST00000556433 OR5AC2Q9NZP5 309 aa15.66■□□□□ 0.1
ACTN1-220ENST00000556433 IGKV2-40A0A087WW87 121 aaPredicted RBP15.65■□□□□ 0.1
ACTN1-220ENST00000556433 TRGV1A0A0A0MS02 117 aa15.65■□□□□ 0.1
ACTN1-220ENST00000556433 IGKV2D-40P01614 121 aaPredicted RBP15.65■□□□□ 0.1
ACTN1-220ENST00000556433 CRISP2P16562 243 aa15.65■□□□□ 0.1
ACTN1-220ENST00000556433 ANXA2RQ3ZCQ2 193 aa15.65■□□□□ 0.1
ACTN1-220ENST00000556433 LRRC37A5PQ49AS3 106 aa15.65■□□□□ 0.1
ACTN1-220ENST00000556433 VGLL1Q99990 258 aa15.65■□□□□ 0.1
ACTN1-220ENST00000556433 NMES1Q9C002 83 aa15.65■□□□□ 0.1
ACTN1-220ENST00000556433 OR51M1Q9H341 326 aa15.65■□□□□ 0.1
ACTN1-220ENST00000556433 TTC32Q5I0X7 151 aa15.64■□□□□ 0.09
ACTN1-220ENST00000556433 TMEM78Q5T7P6 136 aa15.64■□□□□ 0.09
ACTN1-220ENST00000556433 UPK3BQ9BT76 320 aa15.64■□□□□ 0.09
ACTN1-220ENST00000556433 KLF12Q9Y4X4 402 aa15.64■□□□□ 0.09
ACTN1-220ENST00000556433 H0YIZ8 118 aa15.63■□□□□ 0.09
ACTN1-220ENST00000556433 NMBP08949 121 aa15.63■□□□□ 0.09
ACTN1-220ENST00000556433 VSIG2Q96IQ7 327 aa15.63■□□□□ 0.09
ACTN1-220ENST00000556433 C18orf15Q96N68 181 aa15.63■□□□□ 0.09
ACTN1-220ENST00000556433 PAXXQ9BUH6 204 aa15.63■□□□□ 0.09
ACTN1-220ENST00000556433 WDR61Q9GZS3 305 aaKnown RBP15.63■□□□□ 0.09
ACTN1-220ENST00000556433 FUT9Q9Y231 359 aa15.63■□□□□ 0.09
ACTN1-220ENST00000556433 MRPS16Q9Y3D3 137 aaKnown RBP15.63■□□□□ 0.09
ACTN1-220ENST00000556433 RGS13O14921 159 aa15.62■□□□□ 0.09
ACTN1-220ENST00000556433 OR10J4P0C629 311 aa15.62■□□□□ 0.09
ACTN1-220ENST00000556433 CYCSP99999 105 aaKnown RBP15.62■□□□□ 0.09
ACTN1-220ENST00000556433 ZFAND2AQ8N6M9 145 aa15.62■□□□□ 0.09
ACTN1-220ENST00000556433 MRPL32Q9BYC8 188 aaKnown RBP15.62■□□□□ 0.09
ACTN1-220ENST00000556433 KRTAP1-5Q9BYS1 174 aa15.62■□□□□ 0.09
ACTN1-220ENST00000556433 KCNIP2Q9NS61 270 aa15.62■□□□□ 0.09
ACTN1-220ENST00000556433 SPINK4O60575 86 aa15.61■□□□□ 0.09
ACTN1-220ENST00000556433 UPK1BO75841 260 aa15.61■□□□□ 0.09
ACTN1-220ENST00000556433 PRR9Q5T870 116 aa15.61■□□□□ 0.09
ACTN1-220ENST00000556433 FXYD5Q96DB9 178 aa15.61■□□□□ 0.09
ACTN1-220ENST00000556433 Q9H3A6 140 aa15.61■□□□□ 0.09
ACTN1-220ENST00000556433 ZNF492Q9P255 531 aa15.61■□□□□ 0.09
ACTN1-220ENST00000556433 TP53TG3Q9ULZ0 132 aa15.61■□□□□ 0.09
ACTN1-220ENST00000556433 A0A096LPF7 62 aa15.6■□□□□ 0.09
ACTN1-220ENST00000556433 INMT-MINDY4F8WBC2 141 aa15.6■□□□□ 0.09
ACTN1-220ENST00000556433 TCL1AP56279 114 aa15.6■□□□□ 0.09
ACTN1-220ENST00000556433 Q6ZQT7 251 aa15.6■□□□□ 0.09
ACTN1-220ENST00000556433 IGHV1OR15-1A0A075B7D0 117 aa15.59■□□□□ 0.09
ACTN1-220ENST00000556433 A0A1W2PPQ1 181 aa15.59■□□□□ 0.09
ACTN1-220ENST00000556433 C17orf112F2Z3M2 114 aa15.59■□□□□ 0.09
ACTN1-220ENST00000556433 PRAF2O60831 178 aa15.59■□□□□ 0.09
ACTN1-220ENST00000556433 ZNF138P52744 262 aa15.59■□□□□ 0.09
ACTN1-220ENST00000556433 IBA57Q5T440 356 aaKnown RBP15.59■□□□□ 0.09
ACTN1-220ENST00000556433 PHYHIPLQ96FC7 376 aa15.59■□□□□ 0.09
ACTN1-220ENST00000556433 IFITM3Q01628 133 aa15.58■□□□□ 0.08
ACTN1-220ENST00000556433 ARPC5LQ9BPX5 153 aa15.58■□□□□ 0.08
ACTN1-220ENST00000556433 OR7C2O60412 319 aa15.57■□□□□ 0.08
ACTN1-220ENST00000556433 CSN1S1P47710 185 aa15.57■□□□□ 0.08
ACTN1-220ENST00000556433 RANP62826 216 aaKnown RBP15.57■□□□□ 0.08
ACTN1-220ENST00000556433 SPATA12Q7Z6I5 190 aa15.57■□□□□ 0.08
ACTN1-220ENST00000556433 Q8TAT8 98 aa15.57■□□□□ 0.08
ACTN1-220ENST00000556433 PPP1R1CQ8WVI7 109 aa15.57■□□□□ 0.08
ACTN1-220ENST00000556433 ATP5SQ99766 215 aa15.57■□□□□ 0.08
ACTN1-220ENST00000556433 KRTAP4-5Q9BYR2 181 aa15.57■□□□□ 0.08
ACTN1-220ENST00000556433 MRPL16Q9NX20 251 aaKnown RBP15.57■□□□□ 0.08
ACTN1-220ENST00000556433 LRP1BQ9NZR2 4599 aa15.56■□□□□ 0.08
ACTN1-220ENST00000556433 PAX4O43316 350 aa15.56■□□□□ 0.08
ACTN1-220ENST00000556433 IGHV3-53P01767 116 aa15.56■□□□□ 0.08
ACTN1-220ENST00000556433 H2BFSP57053 126 aa15.56■□□□□ 0.08
ACTN1-220ENST00000556433 ST6GAL2Q96JF0 529 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms