RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 TP53TG1Q9Y2A0 90 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 A0A0G2JRQ6 117 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 IGLC1P0CG04 106 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 DEFB130BP0DP73 79 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 DEFB130AP0DP74 79 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 HLA-DRB4P13762 266 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 Q6ZR03 302 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 HLA-DRB4X5D2U9 266 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 UBE2V1Q13404 147 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 RNF138Q8WVD3 245 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 SMIM27A0A1W2PRY6 76 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 SHISA9B4DS77 424 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 F8VRH5 84 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 IGHV2-5P01817 119 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 Q6ZSR3 168 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 CACNA1GO43497 2377 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 DLEU1O43261 78 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 Q6ZVH6 145 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 C18orf32Q8TCD1 76 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 WIPF2Q8TF74 440 aaPredicted RBP8.55□□□□□ -1.04
ACTN1-216ENST00000556083 EP400Q96L91 3159 aa8.55□□□□□ -1.04
ACTN1-216ENST00000556083 DAZAP2Q15038 168 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-216ENST00000556083 KIR3DS1Q14943 382 aa8.54□□□□□ -1.04
ACTN1-216ENST00000556083 IFITM1P13164 125 aa8.54□□□□□ -1.04
ACTN1-216ENST00000556083 TRAV8-1A0A0A6YYK1 113 aa8.54□□□□□ -1.04
ACTN1-216ENST00000556083 DMRTC2Q8IXT2 367 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-216ENST00000556083 VOPP1Q96AW1 172 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 FAM215AQ9Y5M1 114 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 PRR20EP86478 221 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 PRR20CP86479 221 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 PRR20DP86480 221 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 PRR20BP86481 221 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 PRR20AP86496 221 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 NPBQ8NG41 125 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 PI4KAP42356 2102 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 A0A087WWL8 130 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 XCL2Q9UBD3 114 aa8.53□□□□□ -1.04
ACTN1-216ENST00000556083 ABCA4P78363 2273 aa8.52□□□□□ -1.04
ACTN1-216ENST00000556083 F8W1H4 67 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 K7EMT4 169 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 GAGE12JA6NER3 117 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 MED14OSP0DP75 135 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 PRB3Q04118 309 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-216ENST00000556083 GAGE1Q13065 139 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 GAGE4Q13068 117 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 GAGE5Q13069 117 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 SPINK13Q1W4C9 94 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 IL17DQ8TAD2 202 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 PPDPFLQ8WWR9 84 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 LRRK1Q38SD2 2015 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 HIST1H4AP62805 103 aaKnown RBP8.52□□□□□ -1.05
ACTN1-216ENST00000556083 KLF5Q13887 457 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-216ENST00000556083 NDUFA12Q9UI09 145 aa8.52□□□□□ -1.05
ACTN1-216ENST00000556083 IGHV3-73A0A0B4J1V6 119 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 A0A0U1RRA0 63 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 BVES-AS1Q5T3Y7 98 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 UBE2WQ96B02 151 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 IGHV3-64A0A075B6Q5 118 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 CRLF1O75462 422 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 WT1-ASQ06250 92 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 LHFPL4Q7Z7J7 247 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 RIF1Q5UIP0 2472 aaKnown RBP8.51□□□□□ -1.05
ACTN1-216ENST00000556083 DKK1O94907 266 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 ANXA2RQ3ZCQ2 193 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 MPV17L2Q567V2 206 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 SCN5AQ14524 2016 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 FNDC1Q4ZHG4 1894 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-216ENST00000556083 HLA-DMBP28068 263 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 INSL3P51460 131 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 FBXL19-AS1Q494R0 122 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 MRPL51Q4U2R6 128 aaKnown RBP8.51□□□□□ -1.05
ACTN1-216ENST00000556083 ZNF491Q8N8L2 437 aa8.51□□□□□ -1.05
ACTN1-216ENST00000556083 C10orf91Q5T1B1 145 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 ZNRF2Q8NHG8 242 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 V9GYV3 84 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 LTAP01374 205 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 ACYP1P07311 99 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 COX8AP10176 69 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 DEFB113Q30KQ7 82 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 Q6ZWC4 215 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 C16orf74Q96GX8 76 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 TRAV8-3A0A0A6YYJ7 113 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 RUSC1-AS1Q66K80 236 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 PRO1854Q9UHT4 67 aa8.5□□□□□ -1.05
ACTN1-216ENST00000556083 HEATR1Q9H583 2144 aaKnown RBP8.5□□□□□ -1.05
ACTN1-216ENST00000556083 MRPL23Q16540 153 aaKnown RBP8.5□□□□□ -1.05
ACTN1-216ENST00000556083 C22orf46C9J442 243 aa8.49□□□□□ -1.05
ACTN1-216ENST00000556083 FXYD5Q96DB9 178 aa8.49□□□□□ -1.05
ACTN1-216ENST00000556083 KLHDC3Q9BQ90 382 aa8.49□□□□□ -1.05
ACTN1-216ENST00000556083 CENPVL3A0A0U1RRI6 287 aa8.49□□□□□ -1.05
ACTN1-216ENST00000556083 WDR86Q86TI4 376 aa8.49□□□□□ -1.05
ACTN1-216ENST00000556083 WFDC12Q8WWY7 111 aa8.49□□□□□ -1.05
ACTN1-216ENST00000556083 DSCR8Q96T75 97 aa8.49□□□□□ -1.05
ACTN1-216ENST00000556083 PLXNA4Q9HCM2 1894 aa8.49□□□□□ -1.05
ACTN1-216ENST00000556083 hDV102S1A0JD36 115 aa8.49□□□□□ -1.05
ACTN1-216ENST00000556083 C9JAW5 83 aa8.49□□□□□ -1.05
ACTN1-216ENST00000556083 CITED2Q99967 270 aaPredicted RBP8.49□□□□□ -1.05
ACTN1-216ENST00000556083 COX11Q9Y6N1 276 aa8.49□□□□□ -1.05
ACTN1-216ENST00000556083 LHBP01229 141 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms