RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 I3L3M4 83 aa14.03□□□□□ -0.16
SYNE3-204ENST00000555759 KLRD1Q13241 179 aa14.03□□□□□ -0.16
SYNE3-204ENST00000555759 PRSS22Q9GZN4 317 aa14.03□□□□□ -0.16
SYNE3-204ENST00000555759 C15orf65H3BRN8 121 aa14.03□□□□□ -0.16
SYNE3-204ENST00000555759 WFDC12Q8WWY7 111 aa14.02□□□□□ -0.16
SYNE3-204ENST00000555759 ZNF625Q96I27 306 aaPredicted RBP14.02□□□□□ -0.16
SYNE3-204ENST00000555759 ZNF672Q499Z4 452 aaPredicted RBP14.02□□□□□ -0.16
SYNE3-204ENST00000555759 TMEM126AQ9H061 195 aa14.02□□□□□ -0.16
SYNE3-204ENST00000555759 LYPD6Q86Y78 171 aa14.02□□□□□ -0.17
SYNE3-204ENST00000555759 C1orf159Q96HA4 380 aa14.02□□□□□ -0.17
SYNE3-204ENST00000555759 LYNX1G3V0Z9 82 aa14.02□□□□□ -0.17
SYNE3-204ENST00000555759 LYNX1P0DP58 116 aa14.02□□□□□ -0.17
SYNE3-204ENST00000555759 NDPQ00604 133 aa14.02□□□□□ -0.17
SYNE3-204ENST00000555759 C6orf226Q5I0X4 101 aa14.02□□□□□ -0.17
SYNE3-204ENST00000555759 Q0VFX4 171 aa14.01□□□□□ -0.17
SYNE3-204ENST00000555759 SMIM20Q8N5G0 67 aa14.01□□□□□ -0.17
SYNE3-204ENST00000555759 DEFB104AQ8WTQ1 72 aa14.01□□□□□ -0.17
SYNE3-204ENST00000555759 NDUFA12Q9UI09 145 aa14.01□□□□□ -0.17
SYNE3-204ENST00000555759 CMC4P56277 68 aaPredicted RBP14.01□□□□□ -0.17
SYNE3-204ENST00000555759 C8orf86Q6ZUL3 223 aa14.01□□□□□ -0.17
SYNE3-204ENST00000555759 TEN1Q86WV5 123 aa14.01□□□□□ -0.17
SYNE3-204ENST00000555759 LINC00311Q8N616 119 aa14.01□□□□□ -0.17
SYNE3-204ENST00000555759 SDHAF1A6NFY7 115 aa14.01□□□□□ -0.17
SYNE3-204ENST00000555759 IGHV3-73A0A0B4J1V6 119 aa14.01□□□□□ -0.17
SYNE3-204ENST00000555759 GATA4P43694 442 aa14.01□□□□□ -0.17
SYNE3-204ENST00000555759 WT1-ASQ06250 92 aa14.01□□□□□ -0.17
SYNE3-204ENST00000555759 MDS2Q8NDY4 140 aa14□□□□□ -0.17
SYNE3-204ENST00000555759 SSC4DQ8WTU2 575 aa14□□□□□ -0.17
SYNE3-204ENST00000555759 RHODO00212 210 aa14□□□□□ -0.17
SYNE3-204ENST00000555759 COX6B1P14854 86 aa14□□□□□ -0.17
SYNE3-204ENST00000555759 C17orf58Q2M2W7 97 aa14□□□□□ -0.17
SYNE3-204ENST00000555759 ANKRD39Q53RE8 183 aa14□□□□□ -0.17
SYNE3-204ENST00000555759 FAM120AOSQ5T036 256 aa13.99□□□□□ -0.17
SYNE3-204ENST00000555759 ZNF524Q96C55 264 aa13.99□□□□□ -0.17
SYNE3-204ENST00000555759 Q8TCH9 128 aa13.99□□□□□ -0.17
SYNE3-204ENST00000555759 EFNA4P52798 201 aa13.99□□□□□ -0.17
SYNE3-204ENST00000555759 SRSF2Q01130 221 aaKnown RBP13.99□□□□□ -0.17
SYNE3-204ENST00000555759 WDR86Q86TI4 376 aa13.99□□□□□ -0.17
SYNE3-204ENST00000555759 PHF3Q92576 2039 aaKnown RBP13.99□□□□□ -0.17
SYNE3-204ENST00000555759 LTBRP36941 435 aa13.99□□□□□ -0.17
SYNE3-204ENST00000555759 KIAA2026Q5HYC2 2103 aa13.99□□□□□ -0.17
SYNE3-204ENST00000555759 TRAV13-1A0A0B4J241 112 aa13.98□□□□□ -0.17
SYNE3-204ENST00000555759 CRYBA4P53673 196 aa13.98□□□□□ -0.17
SYNE3-204ENST00000555759 ATP6V0E2Q8NHE4 81 aa13.98□□□□□ -0.17
SYNE3-204ENST00000555759 PLXNA4Q9HCM2 1894 aa13.98□□□□□ -0.17
SYNE3-204ENST00000555759 FAM110DQ8TAY7 271 aaPredicted RBP13.98□□□□□ -0.17
SYNE3-204ENST00000555759 ZNF493Q6ZR52 646 aa13.98□□□□□ -0.17
SYNE3-204ENST00000555759 RHPN1-AS1Q9BWJ2 59 aa13.98□□□□□ -0.17
SYNE3-204ENST00000555759 TRAV26-2A0A0B4J265 109 aa13.97□□□□□ -0.17
SYNE3-204ENST00000555759 PF4P02776 101 aa13.97□□□□□ -0.17
SYNE3-204ENST00000555759 Q6ZSR3 168 aa13.97□□□□□ -0.17
SYNE3-204ENST00000555759 MBD3L4A6NDZ8 208 aaPredicted RBP13.97□□□□□ -0.17
SYNE3-204ENST00000555759 MBD3L3A6NE82 208 aaPredicted RBP13.97□□□□□ -0.17
SYNE3-204ENST00000555759 MBD3L5A6NJ08 208 aaPredicted RBP13.97□□□□□ -0.17
SYNE3-204ENST00000555759 MBD3L2Q8NHZ7 208 aaPredicted RBP13.97□□□□□ -0.17
SYNE3-204ENST00000555759 IGF2BP2-AS1Q96M15 143 aa13.97□□□□□ -0.17
SYNE3-204ENST00000555759 WISP1O95388 367 aa13.97□□□□□ -0.17
SYNE3-204ENST00000555759 IGHG3P01860 377 aa13.97□□□□□ -0.17
SYNE3-204ENST00000555759 TRAV13-2A0A0B4J235 113 aa13.97□□□□□ -0.17
SYNE3-204ENST00000555759 FOXI1Q12951 378 aa13.96□□□□□ -0.17
SYNE3-204ENST00000555759 DAZ1Q9NQZ3 744 aaKnown RBP13.96□□□□□ -0.17
SYNE3-204ENST00000555759 PRSS29PA6NIE9 313 aa13.95□□□□□ -0.18
SYNE3-204ENST00000555759 WFDC2Q14508 124 aa13.95□□□□□ -0.18
SYNE3-204ENST00000555759 LINC00173Q6ZV60 143 aa13.95□□□□□ -0.18
SYNE3-204ENST00000555759 LINC00527Q9UJ94 153 aa13.95□□□□□ -0.18
SYNE3-204ENST00000555759 C3orf36Q3SXR2 165 aa13.95□□□□□ -0.18
SYNE3-204ENST00000555759 SCN5AQ14524 2016 aa13.95□□□□□ -0.18
SYNE3-204ENST00000555759 IGHV1-69DA0A0B4J2H0 117 aa13.95□□□□□ -0.18
SYNE3-204ENST00000555759 MED12Q93074 2177 aa13.95□□□□□ -0.18
SYNE3-204ENST00000555759 TRGV1A0A0A0MS02 117 aa13.94□□□□□ -0.18
SYNE3-204ENST00000555759 LYPD2Q6UXB3 125 aa13.94□□□□□ -0.18
SYNE3-204ENST00000555759 CEP290O15078 2479 aa13.94□□□□□ -0.18
SYNE3-204ENST00000555759 INSP01308 110 aa13.94□□□□□ -0.18
SYNE3-204ENST00000555759 RBMY1FQ15415 496 aaKnown RBP13.94□□□□□ -0.18
SYNE3-204ENST00000555759 PRDM6Q9NQX0 595 aa13.94□□□□□ -0.18
SYNE3-204ENST00000555759 ZNF134P52741 427 aa13.93□□□□□ -0.18
SYNE3-204ENST00000555759 TMEM258P61165 79 aa13.93□□□□□ -0.18
SYNE3-204ENST00000555759 FXYD2P54710 66 aa13.93□□□□□ -0.18
SYNE3-204ENST00000555759 WDR90Q96KV7 1748 aa13.93□□□□□ -0.18
SYNE3-204ENST00000555759 TRAV26-1A0A087WT03 109 aa13.93□□□□□ -0.18
SYNE3-204ENST00000555759 J3KT08 172 aa13.93□□□□□ -0.18
SYNE3-204ENST00000555759 ZNRD1Q9P1U0 126 aa13.93□□□□□ -0.18
SYNE3-204ENST00000555759 SYNJ2BPP57105 145 aa13.93□□□□□ -0.18
SYNE3-204ENST00000555759 ASPHD1Q5U4P2 390 aa13.93□□□□□ -0.18
SYNE3-204ENST00000555759 Q6ZR03 302 aa13.92□□□□□ -0.18
SYNE3-204ENST00000555759 RPL32P62910 135 aaKnown RBP13.92□□□□□ -0.18
SYNE3-204ENST00000555759 SS18Q15532 418 aa13.92□□□□□ -0.18
SYNE3-204ENST00000555759 ANXA2RQ3ZCQ2 193 aa13.91□□□□□ -0.18
SYNE3-204ENST00000555759 TCTEX1D4Q5JR98 221 aa13.91□□□□□ -0.18
SYNE3-204ENST00000555759 RHOHQ15669 191 aa13.91□□□□□ -0.18
SYNE3-204ENST00000555759 HEATR5AQ86XA9 2040 aa13.91□□□□□ -0.18
SYNE3-204ENST00000555759 RBAKDNA6NC62 111 aa13.91□□□□□ -0.18
SYNE3-204ENST00000555759 C11orf1Q9H5F2 150 aa13.91□□□□□ -0.18
SYNE3-204ENST00000555759 VWA8A3KMH1 1905 aa13.91□□□□□ -0.18
SYNE3-204ENST00000555759 ATOX1O00244 68 aa13.91□□□□□ -0.18
SYNE3-204ENST00000555759 DKK1O94907 266 aa13.9□□□□□ -0.18
SYNE3-204ENST00000555759 TEX36Q5VZQ5 186 aa13.9□□□□□ -0.18
SYNE3-204ENST00000555759 ABCA7Q8IZY2 2146 aa13.9□□□□□ -0.18
SYNE3-204ENST00000555759 ZNF318Q5VUA4 2279 aa13.89□□□□□ -0.19
SYNE3-204ENST00000555759 PRSS47A8MTI9 375 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms