RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 RELNP78509 3460 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 DNAH12Q6ZR08 3092 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 CFAP54Q96N23 3096 aa0.05□□□□□ -2.4
SCFD1-214ENST00000554819 UHRF1BP1Q6BDS2 1440 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 LRP2P98164 4655 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 DCHS2Q6V1P9 2916 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 CENPFP49454 3210 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 ADGRG4Q8IZF6 3080 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 ERCC6L2Q5T890 1561 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 hDV103S1A0JD37 113 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 C9orf170A2RU37 121 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 C5orf67F2Z3F1 127 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 AIPO00170 330 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 E2F6O75461 281 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 BANF1O75531 89 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 TRGC2P03986 189 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 IFNA4P05014 189 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 S100A6P06703 90 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 CD14P08571 375 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 CXCL1P09341 107 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 CAPZBP47756 277 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 SPINT3P49223 89 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 ARPP19P56211 112 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 KLRD1Q13241 179 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 EIF3IQ13347 325 aaKnown RBP0.04□□□□□ -2.4
SCFD1-214ENST00000554819 SCGB2B2Q4G0G5 96 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 C6orf52Q5T4I8 152 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 DHRS4L2Q6PKH6 230 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 LINC00299Q6ZSB3 139 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 S100A7AQ86SG5 101 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 LRRC18Q8N456 261 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 OR4K15Q8NH41 348 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 DGCR14Q96DF8 476 aaKnown RBP0.04□□□□□ -2.4
SCFD1-214ENST00000554819 ZHX1-C8orf76Q96EF9 292 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 GPX7Q96SL4 187 aaPredicted RBP0.04□□□□□ -2.4
SCFD1-214ENST00000554819 OR2J1Q9GZK6 312 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 RNF11Q9Y3C5 154 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 LOC400499M0QZD8 3231 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 KMT2AQ03164 3969 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 DNAH7Q8WXX0 4024 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 CENPEQ02224 2701 aa0.04□□□□□ -2.4
SCFD1-214ENST00000554819 MGAQ8IWI9 3026 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 BRCA2P51587 3418 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 MYCBP2O75592 4640 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 FANCMQ8IYD8 2048 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 KDM5AP29375 1690 aaKnown RBP0.03□□□□□ -2.4
SCFD1-214ENST00000554819 TRAV23DV6A0A075B6W5 121 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 A0A0J9YY99 117 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 NUPR2A6NF83 97 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 A6NN06 94 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 ZNF727A8MUV8 499 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 G3V2T6 193 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 H7C1C5 153 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 HIST1H2BKO60814 126 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 IFNA14P01570 189 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 HIST1H2BJP06899 126 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 SPTBP11277 2137 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 IDO1P14902 403 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 MT4P47944 62 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 TMBIM6P55061 237 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 FXYD4P59646 89 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 LCN6P62502 163 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 GNG5P63218 68 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 TMED2Q15363 201 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 KRTAP19-6Q3LI70 58 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 FOXI2Q6ZQN5 318 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 Q6ZQY7 126 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 PHF5AQ7RTV0 110 aaKnown RBP0.03□□□□□ -2.4
SCFD1-214ENST00000554819 PXT1Q8NFP0 134 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 ZNF714Q96N38 554 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 PHB2Q99623 299 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 SPRR2GQ9BYE4 73 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 MAP1LC3BQ9GZQ8 125 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 SH3BGRL3Q9H299 93 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 LYRM2Q9NU23 88 aaPredicted RBP0.03□□□□□ -2.4
SCFD1-214ENST00000554819 LAMA5O15230 3695 aa0.03□□□□□ -2.4
SCFD1-214ENST00000554819 PTPRZ1P23471 2315 aaPredicted RBP0.03□□□□□ -2.41
SCFD1-214ENST00000554819 CD109Q6YHK3 1445 aa0.03□□□□□ -2.41
SCFD1-214ENST00000554819 CAMSAP2Q08AD1 1489 aa0.03□□□□□ -2.41
SCFD1-214ENST00000554819 PDE4DIPQ5VU43 2346 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 MYO15AQ9UKN7 3530 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 SVEP1Q4LDE5 3571 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 RIIAD1A6NNX1 92 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 K7ERJ3 54 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 RER1O15258 196 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 LYRM1O43325 122 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 ATG12O94817 140 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 APOA2P02652 100 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 PDE6GP18545 87 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 OGNP20774 298 aaKnown RBP0.02□□□□□ -2.41
SCFD1-214ENST00000554819 PHBP35232 272 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 ARF6P62330 175 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 MRPS25P82663 173 aaKnown RBP0.02□□□□□ -2.41
SCFD1-214ENST00000554819 MIR22HGQ0VDD5 57 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 OCIAD2Q56VL3 154 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 AKR1C8PQ5T2L2 129 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 C1orf140Q5VVS0 124 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 IFT20Q8IY31 132 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 LINC00269Q8N2A0 174 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 NUP35Q8NFH5 326 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms