RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 GPR82Q96P67 336 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 PAXXQ9BUH6 204 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 MAP1LC3BQ9GZQ8 125 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 OR51M1Q9H341 326 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 ZNF586Q9NXT0 402 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 NOTCH1P46531 2555 aa4.69□□□□□ -1.66
SCFD1-212ENST00000554486 AGRNO00468 2067 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 IGKV3-7A0A075B6H7 116 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 A0A087X0K7 114 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 A0A1B0GV50 99 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 HELTA6NFD8 242 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 H3BTX0 84 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 SLC17A3O00476 420 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 SOCS3O14543 225 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 NMBP08949 121 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 OR10J4P0C629 311 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 NBEAP1P0C6P0 100 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 GALR1P47211 349 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 CCL20P78556 96 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 C9orf66Q5T8R8 295 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 ZNF767PQ75MW2 155 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 GBGT1Q8N5D6 347 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 LYPD6BQ8NI32 183 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 MCRIP2Q9BUT9 160 aaKnown RBP4.68□□□□□ -1.66
SCFD1-212ENST00000554486 MS4A6AQ9H2W1 248 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 HRH4Q9H3N8 390 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 RNF24Q9Y225 148 aa4.68□□□□□ -1.66
SCFD1-212ENST00000554486 IGLV5-37A0A075B6J1 123 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 TRBV19A0A075B6N1 114 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 TRAV25A0A0B4J276 109 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 K7EQG2 157 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 HBE1P02100 147 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 CD5P06127 495 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 INSL3P51460 131 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 SEC61BP60468 96 aaKnown RBP4.67□□□□□ -1.66
SCFD1-212ENST00000554486 UBE2L3P68036 154 aaKnown RBP4.67□□□□□ -1.66
SCFD1-212ENST00000554486 FAM24BQ8N5W8 94 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 STXBP6Q8NFX7 210 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 OR2K2Q8NGT1 345 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 LRRC20Q8TCA0 184 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 DCANP1Q8TF63 244 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 BLNKQ8WV28 456 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 NRN1Q9NPD7 142 aa4.67□□□□□ -1.66
SCFD1-212ENST00000554486 ZNF256Q9Y2P7 627 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-212ENST00000554486 TRAV2A0A0B4J234 112 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 TRAV8-2A0A0B4J237 113 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 DNASE2O00115 360 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-212ENST00000554486 ZNF253O75346 499 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 HLA-DMBP28068 263 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 TFPI2P48307 235 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 MEOX2P50222 304 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 UBE2G2P60604 165 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 PDE6HQ13956 83 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 GUK1Q16774 197 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 CLLU1Q5K131 121 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 LCN12Q6JVE5 192 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 RBPMS2Q6ZRY4 209 aaKnown RBP4.66□□□□□ -1.66
SCFD1-212ENST00000554486 IQCF2Q8IXL9 164 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 SPAG8Q99932 426 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-212ENST00000554486 ZNF331Q9NQX6 463 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-212ENST00000554486 TMEM167BQ9NRX6 74 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 GNG13Q9P2W3 67 aa4.66□□□□□ -1.66
SCFD1-212ENST00000554486 YTHDF2Q9Y5A9 579 aaKnown RBP4.66□□□□□ -1.66
SCFD1-212ENST00000554486 FAM74A7A6NL05 159 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 GGTLC3B5MD39 225 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 G3V4G9 280 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 TEX46H3BTG2 121 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 ISLRO14498 428 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 ZNF688P0C7X2 276 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 PRB4P10163 310 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-212ENST00000554486 PSMB3P49720 205 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 CAMPP49913 170 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 RANP62826 216 aaKnown RBP4.65□□□□□ -1.67
SCFD1-212ENST00000554486 PAFAH1B2P68402 229 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 EGFEM1PQ0D2K5 195 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 GUCA2BQ16661 112 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 EXOC3-AS1Q8N2X6 119 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 RNF182Q8N6D2 247 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 SLC50A1Q9BRV3 221 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 GPR61Q9BZJ8 451 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 Q9H3A6 140 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 ARL2-SNX15V9GYD0 113 aa4.65□□□□□ -1.67
SCFD1-212ENST00000554486 A0A1W2PRE2 83 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 PGPA6NDG6 321 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 OR4C46A6NHA9 309 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 ZNF705FA8MVS1 300 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-212ENST00000554486 M0R3E3 92 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 CD7P09564 240 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 BCL2P10415 239 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 ATP5G3P48201 142 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 PPT1P50897 306 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 DEFB1P60022 68 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 RAB14P61106 215 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 PSG9Q00887 426 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 PSG3Q16557 428 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 HAGHQ16775 308 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 SAMD13Q5VXD3 122 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 LYPD1Q8N2G4 141 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 LINC00052Q96N35 136 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms