RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 FAM24BQ8N5W8 94 aa12.03□□□□□ -0.48
NEK9-204ENST00000554258 RNF141Q8WVD5 230 aa12.03□□□□□ -0.48
NEK9-204ENST00000554258 TRBV19A0A075B6N1 114 aa12.02□□□□□ -0.49
NEK9-204ENST00000554258 TRAV8-2A0A0B4J237 113 aa12.02□□□□□ -0.49
NEK9-204ENST00000554258 ISLRO14498 428 aa12.02□□□□□ -0.49
NEK9-204ENST00000554258 NBEAP1P0C6P0 100 aa12.02□□□□□ -0.49
NEK9-204ENST00000554258 TFPI2P48307 235 aa12.02□□□□□ -0.49
NEK9-204ENST00000554258 FHITP49789 147 aa12.02□□□□□ -0.49
NEK9-204ENST00000554258 PDE6HQ13956 83 aa12.02□□□□□ -0.49
NEK9-204ENST00000554258 LCN15Q6UWW0 184 aa12.02□□□□□ -0.49
NEK9-204ENST00000554258 CELA1Q9UNI1 258 aa12.02□□□□□ -0.49
NEK9-204ENST00000554258 OR7C2O60412 319 aa12.01□□□□□ -0.49
NEK9-204ENST00000554258 NDUFB4O95168 129 aa12.01□□□□□ -0.49
NEK9-204ENST00000554258 PSMB3P49720 205 aa12.01□□□□□ -0.49
NEK9-204ENST00000554258 KRTAP10-2P60368 255 aa12.01□□□□□ -0.49
NEK9-204ENST00000554258 ZNF331Q9NQX6 463 aaPredicted RBP12.01□□□□□ -0.49
NEK9-204ENST00000554258 HMGB3O15347 200 aaKnown RBP12□□□□□ -0.49
NEK9-204ENST00000554258 CXorf1O96002 111 aa12□□□□□ -0.49
NEK9-204ENST00000554258 ARL14EPLP0DKL9 152 aa12□□□□□ -0.49
NEK9-204ENST00000554258 ID1P41134 155 aa12□□□□□ -0.49
NEK9-204ENST00000554258 FAM213BQ8TBF2 198 aa12□□□□□ -0.49
NEK9-204ENST00000554258 SLC50A1Q9BRV3 221 aa12□□□□□ -0.49
NEK9-204ENST00000554258 CLEC5AQ9NY25 188 aa12□□□□□ -0.49
NEK9-204ENST00000554258 TRAV1-1A0A0B4J248 108 aa11.99□□□□□ -0.49
NEK9-204ENST00000554258 SLC17A3O00476 420 aa11.99□□□□□ -0.49
NEK9-204ENST00000554258 SNRPCP09234 159 aaKnown RBP11.99□□□□□ -0.49
NEK9-204ENST00000554258 OR10J4P0C629 311 aa11.99□□□□□ -0.49
NEK9-204ENST00000554258 GCHFRP30047 84 aa11.99□□□□□ -0.49
NEK9-204ENST00000554258 ALKAL2Q6UX46 152 aa11.99□□□□□ -0.49
NEK9-204ENST00000554258 C16orf92Q96LL3 132 aa11.99□□□□□ -0.49
NEK9-204ENST00000554258 C20orf173Q96LM9 149 aa11.99□□□□□ -0.49
NEK9-204ENST00000554258 MDFICQ9P1T7 246 aa11.99□□□□□ -0.49
NEK9-204ENST00000554258 MAP1LC3B2A6NCE7 125 aa11.98□□□□□ -0.49
NEK9-204ENST00000554258 H3BTX0 84 aa11.98□□□□□ -0.49
NEK9-204ENST00000554258 ZNF688P0C7X2 276 aa11.98□□□□□ -0.49
NEK9-204ENST00000554258 DEFB131AP59861 70 aa11.98□□□□□ -0.49
NEK9-204ENST00000554258 SNRPD3P62318 126 aaKnown RBP11.98□□□□□ -0.49
NEK9-204ENST00000554258 UBE2L3P68036 154 aaKnown RBP11.98□□□□□ -0.49
NEK9-204ENST00000554258 FAM74A1Q5RGS3 127 aa11.98□□□□□ -0.49
NEK9-204ENST00000554258 TEX261Q6UWH6 196 aa11.98□□□□□ -0.49
NEK9-204ENST00000554258 MAP1LC3BQ9GZQ8 125 aa11.98□□□□□ -0.49
NEK9-204ENST00000554258 TMEM167BQ9NRX6 74 aa11.98□□□□□ -0.49
NEK9-204ENST00000554258 H2AFB1P0C5Y9 115 aa11.97□□□□□ -0.49
NEK9-204ENST00000554258 PSG9Q00887 426 aa11.97□□□□□ -0.49
NEK9-204ENST00000554258 PSG3Q16557 428 aa11.97□□□□□ -0.49
NEK9-204ENST00000554258 IGFL4Q6B9Z1 124 aa11.97□□□□□ -0.49
NEK9-204ENST00000554258 SFT2D1Q8WV19 159 aa11.97□□□□□ -0.49
NEK9-204ENST00000554258 PLA2G2DQ9UNK4 145 aa11.97□□□□□ -0.49
NEK9-204ENST00000554258 RNF213Q63HN8 5207 aa11.96□□□□□ -0.49
NEK9-204ENST00000554258 NBDYA0A0U1RRE5 68 aa11.96□□□□□ -0.49
NEK9-204ENST00000554258 XGP55808 180 aa11.96□□□□□ -0.49
NEK9-204ENST00000554258 PSMG4Q5JS54 123 aa11.96□□□□□ -0.49
NEK9-204ENST00000554258 ZNF680Q8NEM1 530 aa11.96□□□□□ -0.49
NEK9-204ENST00000554258 LRRC20Q8TCA0 184 aa11.96□□□□□ -0.49
NEK9-204ENST00000554258 BLNKQ8WV28 456 aa11.96□□□□□ -0.49
NEK9-204ENST00000554258 MRPL53Q96EL3 112 aaKnown RBP11.96□□□□□ -0.49
NEK9-204ENST00000554258 FAM210BQ96KR6 192 aa11.96□□□□□ -0.49
NEK9-204ENST00000554258 TMPRSS5Q9H3S3 457 aa11.96□□□□□ -0.49
NEK9-204ENST00000554258 PRELID1Q9Y255 219 aa11.96□□□□□ -0.49
NEK9-204ENST00000554258 FGF8P55075 233 aaPredicted RBP11.95□□□□□ -0.5
NEK9-204ENST00000554258 ARL6IP6Q8N6S5 226 aa11.95□□□□□ -0.5
NEK9-204ENST00000554258 LYPD6BQ8NI32 183 aa11.95□□□□□ -0.5
NEK9-204ENST00000554258 LINC00052Q96N35 136 aa11.95□□□□□ -0.5
NEK9-204ENST00000554258 X6R8D5 127 aa11.95□□□□□ -0.5
NEK9-204ENST00000554258 A0A1W2PRE2 83 aa11.94□□□□□ -0.5
NEK9-204ENST00000554258 ZNF705EA8MWA4 302 aaPredicted RBP11.94□□□□□ -0.5
NEK9-204ENST00000554258 FAM3BP58499 235 aaPredicted RBP11.94□□□□□ -0.5
NEK9-204ENST00000554258 RANP62826 216 aaKnown RBP11.94□□□□□ -0.5
NEK9-204ENST00000554258 BLOC1S1P78537 153 aa11.94□□□□□ -0.5
NEK9-204ENST00000554258 RNF182Q8N6D2 247 aa11.94□□□□□ -0.5
NEK9-204ENST00000554258 A8MTW9 85 aa11.93□□□□□ -0.5
NEK9-204ENST00000554258 HBE1P02100 147 aa11.93□□□□□ -0.5
NEK9-204ENST00000554258 ICAM4Q14773 271 aa11.93□□□□□ -0.5
NEK9-204ENST00000554258 FOXI2Q6ZQN5 318 aa11.93□□□□□ -0.5
NEK9-204ENST00000554258 EXOC3-AS1Q8N2X6 119 aa11.93□□□□□ -0.5
NEK9-204ENST00000554258 CLUHP3Q96NS8 147 aa11.93□□□□□ -0.5
NEK9-204ENST00000554258 Q9H3A6 140 aa11.93□□□□□ -0.5
NEK9-204ENST00000554258 SAV1Q9H4B6 383 aaPredicted RBP11.93□□□□□ -0.5
NEK9-204ENST00000554258 OTORQ9NRC9 128 aa11.93□□□□□ -0.5
NEK9-204ENST00000554258 ARL2-SNX15V9GYD0 113 aa11.93□□□□□ -0.5
NEK9-204ENST00000554258 A0A0J9YX75 114 aa11.92□□□□□ -0.5
NEK9-204ENST00000554258 IFNA7P01567 189 aa11.92□□□□□ -0.5
NEK9-204ENST00000554258 CCL20P78556 96 aa11.92□□□□□ -0.5
NEK9-204ENST00000554258 RPUSD4Q96CM3 377 aaKnown RBP11.92□□□□□ -0.5
NEK9-204ENST00000554258 AAMDCQ9H7C9 122 aa11.92□□□□□ -0.5
NEK9-204ENST00000554258 PGPA6NDG6 321 aa11.91□□□□□ -0.5
NEK9-204ENST00000554258 KNCNA6PVL3 124 aa11.91□□□□□ -0.5
NEK9-204ENST00000554258 ZNF705FA8MVS1 300 aaPredicted RBP11.91□□□□□ -0.5
NEK9-204ENST00000554258 H3BMM0 161 aa11.91□□□□□ -0.5
NEK9-204ENST00000554258 M0R3E3 92 aa11.91□□□□□ -0.5
NEK9-204ENST00000554258 HLA-DRB4P13762 266 aa11.91□□□□□ -0.5
NEK9-204ENST00000554258 PPT1P50897 306 aa11.91□□□□□ -0.5
NEK9-204ENST00000554258 DEFB1P60022 68 aa11.91□□□□□ -0.5
NEK9-204ENST00000554258 IFITM2Q01629 132 aa11.91□□□□□ -0.5
NEK9-204ENST00000554258 GDF5OSQ5U4N7 250 aa11.91□□□□□ -0.5
NEK9-204ENST00000554258 MORN3Q6PF18 240 aaPredicted RBP11.91□□□□□ -0.5
NEK9-204ENST00000554258 YTHDF2Q9Y5A9 579 aaKnown RBP11.91□□□□□ -0.5
NEK9-204ENST00000554258 HLA-DRB4X5D2U9 266 aa11.91□□□□□ -0.5
NEK9-204ENST00000554258 FAM74A7A6NL05 159 aa11.9□□□□□ -0.5
NEK9-204ENST00000554258 PRAC2D3DTV9 90 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms