RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 CSAG1Q6PB30 78 aa0□□□□□ -2.41
GPN3-209ENST00000551079 ABCA12Q86UK0 2595 aa0□□□□□ -2.41
GPN3-209ENST00000551079 RTL9Q8NET4 1388 aa0□□□□□ -2.41
GPN3-209ENST00000551079 OR13C6PQ8NH95 151 aa0□□□□□ -2.41
GPN3-209ENST00000551079 AP3S1Q92572 193 aa0□□□□□ -2.41
GPN3-209ENST00000551079 RMND5BQ96G75 393 aaPredicted RBP0□□□□□ -2.41
GPN3-209ENST00000551079 RTL8AQ9BWD3 113 aa0□□□□□ -2.41
GPN3-209ENST00000551079 ASXL3Q9C0F0 2248 aa0□□□□□ -2.41
GPN3-209ENST00000551079 LRTM1Q9HBL6 345 aa0□□□□□ -2.41
GPN3-209ENST00000551079 FKBP11Q9NYL4 201 aa0□□□□□ -2.41
GPN3-209ENST00000551079 NCOR2Q9Y618 2525 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 DMBT1Q9UGM3 2413 aaPredicted RBP-0.01□□□□□ -2.41
GPN3-209ENST00000551079 LRP1Q07954 4544 aaKnown RBP-0.01□□□□□ -2.41
GPN3-209ENST00000551079 CELSR1Q9NYQ6 3014 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 IGSF10Q6WRI0 2623 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 POLQO75417 2590 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 A0A096LPI6 279 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 TMEM238C9JI98 176 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 GABARAPH6UMI1 98 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 IFNA4P05014 189 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 CCL4P13236 92 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 CRYBA4P53673 196 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 FXYD6P3P58550 94 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 QRFPP83859 136 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 PPP1R2P3Q6NXS1 205 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 CCL4L1Q8NHW4 92 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 PLEKHB2Q96CS7 222 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 LINC00208Q96KT6 92 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 OR2H1Q9GZK4 316 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 CST11Q9H112 138 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 NAT8BQ9UHF3 227 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 AHCTF1Q8WYP5 2266 aa-0.01□□□□□ -2.41
GPN3-209ENST00000551079 HELZP42694 1942 aaKnown RBP-0.01□□□□□ -2.41
GPN3-209ENST00000551079 HRNRQ86YZ3 2850 aaPredicted RBP-0.02□□□□□ -2.41
GPN3-209ENST00000551079 EIF3AQ14152 1382 aaKnown RBP-0.02□□□□□ -2.41
GPN3-209ENST00000551079 ANKRD17O75179 2603 aaKnown RBP-0.02□□□□□ -2.41
GPN3-209ENST00000551079 TRAV5A0A0B4J249 113 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 A0A0J9YY99 117 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 NBDYA0A0U1RRE5 68 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 TRDV1A0A1B0GX56 115 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 AIPO00170 330 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 RPL35P42766 123 aaKnown RBP-0.02□□□□□ -2.41
GPN3-209ENST00000551079 BASP1P80723 227 aaKnown RBP-0.02□□□□□ -2.41
GPN3-209ENST00000551079 SCGB2B2Q4G0G5 96 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 HRCT1Q6UXD1 115 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 CASC2Q6XLA1 102 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 PRR15Q8IV56 129 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 TEX29Q8N6K0 151 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 CLEC2BQ92478 149 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 DIRC1Q969H9 104 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 OR4C12Q96R67 309 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 TCEAL2Q9H3H9 227 aaPredicted RBP-0.02□□□□□ -2.41
GPN3-209ENST00000551079 GID8Q9NWU2 228 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 MED11Q9P086 117 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 TPRKBQ9Y3C4 175 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 TANC1Q9C0D5 1861 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 XIRP1Q702N8 1843 aaKnown RBP-0.02□□□□□ -2.41
GPN3-209ENST00000551079 SSPOA2VEC9 5147 aa-0.02□□□□□ -2.41
GPN3-209ENST00000551079 UBR5O95071 2799 aaPredicted RBP-0.03□□□□□ -2.41
GPN3-209ENST00000551079 SPAG17Q6Q759 2223 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 DSPPQ9NZW4 1301 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 C3orf85A0A1B0GTC6 90 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 GPR31O00270 319 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 LYRM1O43325 122 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 APOA2P02652 100 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 FABP2P12104 132 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 FABP4P15090 132 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 GNG10P50151 68 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 ZNF56Q15929 161 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 GLYATL3Q5SZD4 288 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 NUP35Q8NFH5 326 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 NABP2Q9BQ15 211 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 IL20Q9NYY1 176 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 SYNMO15061 1565 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 DLC1Q96QB1 1528 aa-0.03□□□□□ -2.41
GPN3-209ENST00000551079 TCOF1Q13428 1488 aaKnown RBP-0.03□□□□□ -2.41
GPN3-209ENST00000551079 FAM135BQ49AJ0 1406 aa-0.04□□□□□ -2.42
GPN3-209ENST00000551079 FGD6Q6ZV73 1430 aa-0.04□□□□□ -2.42
GPN3-209ENST00000551079 LOC107984156A0A0G2JMH3 177 aa-0.04□□□□□ -2.42
GPN3-209ENST00000551079 LOC101927531A0A1B0GV80 90 aa-0.04□□□□□ -2.42
GPN3-209ENST00000551079 KPNA4O00629 521 aaPredicted RBP-0.04□□□□□ -2.42
GPN3-209ENST00000551079 ARL17AQ8IVW1 177 aa-0.04□□□□□ -2.42
GPN3-209ENST00000551079 DYDC1Q8WWB3 177 aa-0.04□□□□□ -2.42
GPN3-209ENST00000551079 EFCAB11Q9BUY7 163 aa-0.04□□□□□ -2.42
GPN3-209ENST00000551079 COMMD3Q9UBI1 195 aa-0.04□□□□□ -2.42
GPN3-209ENST00000551079 BOKQ9UMX3 212 aaPredicted RBP-0.04□□□□□ -2.42
GPN3-209ENST00000551079 MAP2P11137 1827 aaKnown RBP-0.04□□□□□ -2.42
GPN3-209ENST00000551079 KIAA1107Q9UPP5 1409 aa-0.04□□□□□ -2.42
GPN3-209ENST00000551079 RREB1Q92766 1687 aa-0.05□□□□□ -2.42
GPN3-209ENST00000551079 OTOGQ6ZRI0 2925 aa-0.05□□□□□ -2.42
GPN3-209ENST00000551079 ANK2Q01484 3957 aa-0.05□□□□□ -2.42
GPN3-209ENST00000551079 CDC42EP2O14613 210 aa-0.05□□□□□ -2.42
GPN3-209ENST00000551079 S100A11P31949 105 aa-0.05□□□□□ -2.42
GPN3-209ENST00000551079 FXYD3Q14802 87 aa-0.05□□□□□ -2.42
GPN3-209ENST00000551079 SPINK6Q6UWN8 80 aa-0.05□□□□□ -2.42
GPN3-209ENST00000551079 LINC00299Q6ZSB3 139 aa-0.05□□□□□ -2.42
GPN3-209ENST00000551079 FAM24BQ8N5W8 94 aa-0.05□□□□□ -2.42
GPN3-209ENST00000551079 C5orf56Q8N8D9 126 aa-0.05□□□□□ -2.42
GPN3-209ENST00000551079 C5orf17Q8NAS9 161 aa-0.05□□□□□ -2.42
GPN3-209ENST00000551079 OR5H6Q8NGV6 325 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms