RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 AQP10Q96PS8 301 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 ODF3Q96PU9 254 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 NDUFAF3Q9BU61 184 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 Q9H3A6 140 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 NOP10Q9NPE3 64 aaKnown RBP6.9□□□□□ -1.3
HDAC7-229ENST00000549883 FXYD6-FXYD2A0A087WZ82 144 aa6.89□□□□□ -1.31
HDAC7-229ENST00000549883 C7orf71A4D174 169 aa6.89□□□□□ -1.31
HDAC7-229ENST00000549883 KLLNB2CW77 178 aa6.89□□□□□ -1.31
HDAC7-229ENST00000549883 ZNF324O75467 553 aaPredicted RBP6.89□□□□□ -1.31
HDAC7-229ENST00000549883 ATP6V0CP27449 155 aa6.89□□□□□ -1.31
HDAC7-229ENST00000549883 SSX7Q7RTT5 188 aa6.89□□□□□ -1.31
HDAC7-229ENST00000549883 TMEM263Q8WUH6 116 aaKnown RBP6.89□□□□□ -1.31
HDAC7-229ENST00000549883 C16orf74Q96GX8 76 aa6.89□□□□□ -1.31
HDAC7-229ENST00000549883 AAMDCQ9H7C9 122 aa6.89□□□□□ -1.31
HDAC7-229ENST00000549883 TP53TG3Q9ULZ0 132 aa6.89□□□□□ -1.31
HDAC7-229ENST00000549883 PRELID1Q9Y255 219 aa6.89□□□□□ -1.31
HDAC7-229ENST00000549883 EPPK1P58107 5090 aaKnown RBP6.88□□□□□ -1.31
HDAC7-229ENST00000549883 TEX48A0A1B0GUV7 120 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 LYRM9A8MSI8 78 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 CRISP2P16562 243 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 M6PRP20645 277 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 ACOT6Q3I5F7 207 aaPredicted RBP6.88□□□□□ -1.31
HDAC7-229ENST00000549883 KHDC3LQ587J8 217 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 RPL7L1Q6DKI1 246 aaKnown RBP6.88□□□□□ -1.31
HDAC7-229ENST00000549883 OR10G4Q8NGN3 311 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 OR10G9Q8NGN4 311 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 OR10G7Q8NGN6 311 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 OR2T35Q8NGX2 323 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 HYLS1Q96M11 299 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 LINC00477Q96M19 166 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 C20orf144Q9BQM9 153 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 ZNF492Q9P255 531 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 TNFSF18Q9UNG2 199 aa6.88□□□□□ -1.31
HDAC7-229ENST00000549883 DIRC3C9JPN6 131 aa6.87□□□□□ -1.31
HDAC7-229ENST00000549883 SLC25A5P05141 298 aaKnown RBP6.87□□□□□ -1.31
HDAC7-229ENST00000549883 ARL14EPLP0DKL9 152 aa6.87□□□□□ -1.31
HDAC7-229ENST00000549883 GNG5P63218 68 aa6.87□□□□□ -1.31
HDAC7-229ENST00000549883 ZNF493Q6ZR52 646 aa6.87□□□□□ -1.31
HDAC7-229ENST00000549883 Q6ZTI0 123 aa6.87□□□□□ -1.31
HDAC7-229ENST00000549883 LINC00612Q8N6U2 182 aa6.87□□□□□ -1.31
HDAC7-229ENST00000549883 C11orf72Q8NBR9 251 aa6.87□□□□□ -1.31
HDAC7-229ENST00000549883 RAB24Q969Q5 203 aa6.87□□□□□ -1.31
HDAC7-229ENST00000549883 GSN-AS1Q9NRJ2 163 aa6.87□□□□□ -1.31
HDAC7-229ENST00000549883 RPH3ALQ9UNE2 315 aa6.87□□□□□ -1.31
HDAC7-229ENST00000549883 KLF12Q9Y4X4 402 aa6.87□□□□□ -1.31
HDAC7-229ENST00000549883 TIMM8BQ9Y5J9 83 aaPredicted RBP6.87□□□□□ -1.31
HDAC7-229ENST00000549883 TRAV8-1A0A0A6YYK1 113 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 A0A1W2PPV4 95 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 GAGE12BA1L429 117 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 PGPA6NDG6 321 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 CBY3A6NI87 242 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 F5H768 121 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 M0R2N4 97 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 GAGE7O76087 117 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 GPX1P07203 203 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 GAGE12FP0CL80 117 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 GAGE12GP0CL81 117 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 GAGE12IP0CL82 117 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 HOXA5P20719 270 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 CDC34P49427 236 aaPredicted RBP6.86□□□□□ -1.31
HDAC7-229ENST00000549883 ZNF138P52744 262 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 TAS2R45P59539 299 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 TMEM78Q5T7P6 136 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 CCDC28AQ8IWP9 274 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 POM121L12Q8N7R1 296 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 OR2G3Q8NGZ4 309 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 TVP23CQ96ET8 276 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 SGK494Q96LW2 274 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 PYGO2Q9BRQ0 406 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 OTORQ9NRC9 128 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 MUC4Q99102 2169 aa6.86□□□□□ -1.31
HDAC7-229ENST00000549883 IGLV2-18A0A075B6J9 118 aa6.85□□□□□ -1.31
HDAC7-229ENST00000549883 ARPC5O15511 151 aa6.85□□□□□ -1.31
HDAC7-229ENST00000549883 ATP5G1P05496 136 aa6.85□□□□□ -1.31
HDAC7-229ENST00000549883 ATP5G3P48201 142 aa6.85□□□□□ -1.31
HDAC7-229ENST00000549883 ZNF266Q14584 549 aa6.85□□□□□ -1.31
HDAC7-229ENST00000549883 ZNF726P1Q15940 193 aa6.85□□□□□ -1.31
HDAC7-229ENST00000549883 MUC21Q5SSG8 566 aa6.85□□□□□ -1.31
HDAC7-229ENST00000549883 GOLT1AQ6ZVE7 132 aa6.85□□□□□ -1.31
HDAC7-229ENST00000549883 LYPD1Q8N2G4 141 aa6.85□□□□□ -1.31
HDAC7-229ENST00000549883 INO80EQ8NBZ0 244 aaPredicted RBP6.85□□□□□ -1.31
HDAC7-229ENST00000549883 PSMG3Q9BT73 122 aaPredicted RBP6.85□□□□□ -1.31
HDAC7-229ENST00000549883 CYTL1Q9NRR1 136 aa6.85□□□□□ -1.31
HDAC7-229ENST00000549883 FRAS1Q86XX4 4008 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 RBAKDNA6NC62 111 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 SNURFLB1AK76 121 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 NMBP08949 121 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 STAG3L2P0CL84 134 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 STAG3L3P0CL85 134 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 P0DMU3 169 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 FAM231AP0DMU4 169 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 FAM231CP0DMU5 169 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 GCHFRP30047 84 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 CSN1S1P47710 185 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 PQLC2Q6ZP29 291 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 EIF4E3Q8N5X7 224 aaKnown RBP6.84□□□□□ -1.31
HDAC7-229ENST00000549883 OR11H4Q8NGC9 324 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 ASB13Q8WXK3 278 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 FAM210BQ96KR6 192 aa6.84□□□□□ -1.31
HDAC7-229ENST00000549883 LINC00467Q9BRT7 94 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms