RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 OR10J6PQ8NGY7 276 aa8.89□□□□□ -0.99
HDAC7-226ENST00000547259 HLA-DRB4X5D2U9 266 aa8.89□□□□□ -0.99
HDAC7-226ENST00000547259 IGKV2-40A0A087WW87 121 aaPredicted RBP8.88□□□□□ -0.99
HDAC7-226ENST00000547259 RBFOX3A6NFN3 312 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 K7EQM0 130 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 PEX7O00628 323 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 IGKV2D-40P01614 121 aaPredicted RBP8.88□□□□□ -0.99
HDAC7-226ENST00000547259 TCRAP04437 139 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 MEF2BQ02080 365 aaPredicted RBP8.88□□□□□ -0.99
HDAC7-226ENST00000547259 GOLT1AQ6ZVE7 132 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 OR4B1Q8NGF8 309 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 FAM210AQ96ND0 272 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 TXNDC17Q9BRA2 123 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 TCEAL7Q9BRU2 100 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 ATG101Q9BSB4 218 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 EIF5A2Q9GZV4 153 aaKnown RBP8.88□□□□□ -0.99
HDAC7-226ENST00000547259 VAX2Q9UIW0 290 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 EPDR1Q9UM22 224 aa8.88□□□□□ -0.99
HDAC7-226ENST00000547259 SERTM2A0A1B0GWG4 89 aa8.87□□□□□ -0.99
HDAC7-226ENST00000547259 F6UZH7 168 aa8.87□□□□□ -0.99
HDAC7-226ENST00000547259 IGKV3-20P01619 116 aa8.87□□□□□ -0.99
HDAC7-226ENST00000547259 CNN1P51911 297 aaKnown RBP8.87□□□□□ -0.99
HDAC7-226ENST00000547259 ZNF506Q5JVG8 444 aa8.87□□□□□ -0.99
HDAC7-226ENST00000547259 TMEM78Q5T7P6 136 aa8.87□□□□□ -0.99
HDAC7-226ENST00000547259 CCDC28AQ8IWP9 274 aa8.87□□□□□ -0.99
HDAC7-226ENST00000547259 ARL6IP6Q8N6S5 226 aa8.87□□□□□ -0.99
HDAC7-226ENST00000547259 CYB561D1Q8N8Q1 229 aa8.87□□□□□ -0.99
HDAC7-226ENST00000547259 HIST1H2BAQ96A08 127 aa8.87□□□□□ -0.99
HDAC7-226ENST00000547259 RARRES2Q99969 163 aa8.87□□□□□ -0.99
HDAC7-226ENST00000547259 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
HDAC7-226ENST00000547259 AGRNO00468 2067 aa8.86□□□□□ -0.99
HDAC7-226ENST00000547259 SCO2A0A1W2PP80 73 aa8.86□□□□□ -0.99
HDAC7-226ENST00000547259 RBAKDNA6NC62 111 aa8.86□□□□□ -0.99
HDAC7-226ENST00000547259 NPIPB6E9PJ23 425 aa8.86□□□□□ -0.99
HDAC7-226ENST00000547259 H3BMM0 161 aa8.86□□□□□ -0.99
HDAC7-226ENST00000547259 RPL35AP18077 110 aaKnown RBP8.86□□□□□ -0.99
HDAC7-226ENST00000547259 AKR1C3P42330 323 aa8.86□□□□□ -0.99
HDAC7-226ENST00000547259 ERCC8Q13216 396 aa8.86□□□□□ -0.99
HDAC7-226ENST00000547259 TRPT1Q86TN4 253 aaKnown RBP8.86□□□□□ -0.99
HDAC7-226ENST00000547259 LOC102724200A0A096LPH7 203 aaPredicted RBP8.85□□□□□ -0.99
HDAC7-226ENST00000547259 PDE6DO43924 150 aa8.85□□□□□ -0.99
HDAC7-226ENST00000547259 UBE2G1P62253 170 aa8.85□□□□□ -0.99
HDAC7-226ENST00000547259 C9orf47Q6ZRZ4 202 aa8.85□□□□□ -0.99
HDAC7-226ENST00000547259 VGLL1Q99990 258 aa8.85□□□□□ -0.99
HDAC7-226ENST00000547259 TRAV8-1A0A0A6YYK1 113 aa8.84□□□□□ -0.99
HDAC7-226ENST00000547259 RBMY1BA6NDE4 496 aaKnown RBP8.84□□□□□ -0.99
HDAC7-226ENST00000547259 RBMY1EA6NEQ0 496 aaKnown RBP8.84□□□□□ -0.99
HDAC7-226ENST00000547259 RBMY1DP0C7P1 496 aaKnown RBP8.84□□□□□ -0.99
HDAC7-226ENST00000547259 ZNF138P52744 262 aa8.84□□□□□ -0.99
HDAC7-226ENST00000547259 TMEM75Q8N9X5 138 aa8.84□□□□□ -0.99
HDAC7-226ENST00000547259 Q8TAT8 98 aa8.84□□□□□ -0.99
HDAC7-226ENST00000547259 C11orf52Q96A22 123 aa8.84□□□□□ -0.99
HDAC7-226ENST00000547259 FMC1Q96HJ9 113 aa8.84□□□□□ -0.99
HDAC7-226ENST00000547259 SGK494Q96LW2 274 aa8.84□□□□□ -0.99
HDAC7-226ENST00000547259 LINC00477Q96M19 166 aa8.84□□□□□ -0.99
HDAC7-226ENST00000547259 AGPAT4-IT1Q9H0P7 198 aa8.84□□□□□ -0.99
HDAC7-226ENST00000547259 TRAV34A0A0B4J273 112 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 FBLL1A6NHQ2 334 aaKnown RBP8.83□□□□□ -1
HDAC7-226ENST00000547259 A8MTW9 85 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 CT45A10P0DMU9 189 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 LEPP41159 167 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 CEBPGP53567 150 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 APOC4P55056 127 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 FXYD7P58549 80 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 NUTF2P61970 127 aaKnown RBP8.83□□□□□ -1
HDAC7-226ENST00000547259 FLI1Q01543 452 aaPredicted RBP8.83□□□□□ -1
HDAC7-226ENST00000547259 PEA15Q15121 130 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 MORN3Q6PF18 240 aaPredicted RBP8.83□□□□□ -1
HDAC7-226ENST00000547259 PRNTQ86SH4 94 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 C2CD4CQ8TF44 421 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 CLUHP3Q96NS8 147 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 NDFIP1Q9BT67 221 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 SLC35B3Q9H1N7 401 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 RETNQ9HD89 108 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 MED9Q9NWA0 146 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 ZNF492Q9P255 531 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 PSG8Q9UQ74 426 aa8.83□□□□□ -1
HDAC7-226ENST00000547259 RAB19A4D1S5 217 aa8.82□□□□□ -1
HDAC7-226ENST00000547259 NUPR2A6NF83 97 aa8.82□□□□□ -1
HDAC7-226ENST00000547259 PLECQ15149 4684 aaKnown RBP8.82□□□□□ -1
HDAC7-226ENST00000547259 SPINK13Q1W4C9 94 aa8.82□□□□□ -1
HDAC7-226ENST00000547259 AMTNQ6UX39 209 aa8.82□□□□□ -1
HDAC7-226ENST00000547259 Q86TA4 180 aa8.82□□□□□ -1
HDAC7-226ENST00000547259 LINC00479Q96M42 142 aa8.82□□□□□ -1
HDAC7-226ENST00000547259 ODF3Q96PU9 254 aa8.82□□□□□ -1
HDAC7-226ENST00000547259 ALMS1Q8TCU4 4167 aa8.82□□□□□ -1
HDAC7-226ENST00000547259 HYDINQ4G0P3 5121 aa8.81□□□□□ -1
HDAC7-226ENST00000547259 TMEM250H0YL14 139 aa8.81□□□□□ -1
HDAC7-226ENST00000547259 J3KRW8 73 aa8.81□□□□□ -1
HDAC7-226ENST00000547259 M0R2Z0 102 aa8.81□□□□□ -1
HDAC7-226ENST00000547259 CA1P00915 261 aaPredicted RBP8.81□□□□□ -1
HDAC7-226ENST00000547259 IGLV2-11P01706 119 aa8.81□□□□□ -1
HDAC7-226ENST00000547259 AMBPP02760 352 aa8.81□□□□□ -1
HDAC7-226ENST00000547259 S100A9P06702 114 aaKnown RBP8.81□□□□□ -1
HDAC7-226ENST00000547259 SRP19P09132 144 aaKnown RBP8.81□□□□□ -1
HDAC7-226ENST00000547259 TSPOP30536 169 aa8.81□□□□□ -1
HDAC7-226ENST00000547259 SRSF3P84103 164 aaKnown RBP8.81□□□□□ -1
HDAC7-226ENST00000547259 TMEM183BQ1AE95 376 aa8.81□□□□□ -1
HDAC7-226ENST00000547259 COMMD7Q86VX2 200 aa8.81□□□□□ -1
HDAC7-226ENST00000547259 LINC00476Q8WZB0 136 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms