RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TRAV8-2A0A0B4J237 113 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 CRYM-AS1A6NIL9 109 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 CEBPZOSA8MTT3 80 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 E5RGE8 158 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 B3GALNT1O75752 331 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 IGKV1-5P01602 117 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 IGHV3-53P01767 116 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 PMP2P02689 132 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 RPL7P18124 248 aaKnown RBP2.64□□□□□ -1.99
SNHG1-220ENST00000544550 CXCL2P19875 107 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 GPX4P36969 197 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-220ENST00000544550 LEPP41159 167 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 PPT1P50897 306 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 ATP5IP56385 69 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-220ENST00000544550 RND3P61587 244 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 ZNF90Q03938 601 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 ZNF846Q147U1 533 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 ZNF674Q2M3X9 581 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 LINC01620Q4KN68 170 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 AARDQ4LEZ3 155 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 C14orf177Q52M58 125 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 LBHQ53QV2 105 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-220ENST00000544550 NMSQ5H8A3 153 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 OR10J3Q5JRS4 329 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 IBA57Q5T440 356 aaKnown RBP2.64□□□□□ -1.99
SNHG1-220ENST00000544550 GFI1BQ5VTD9 330 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 GPR107Q5VW38 600 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 LAIR2Q6ISS4 152 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 S100A7AQ86SG5 101 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 IQCF2Q8IXL9 164 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 RNF182Q8N6D2 247 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 PACRGLQ8N7B6 248 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 NHLRC2Q8NBF2 726 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 RPUSD4Q96CM3 377 aaKnown RBP2.64□□□□□ -1.99
SNHG1-220ENST00000544550 RMI2Q96E14 147 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 ZNF486Q96H40 463 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-220ENST00000544550 ODF3Q96PU9 254 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 TRGV9Q99603 122 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 MGLLQ99685 303 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 TMEM147Q9BVK8 224 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 SH3BGRL3Q9H299 93 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 AUNIPQ9H7T9 357 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 PKHD1L1Q86WI1 4243 aa2.64□□□□□ -1.99
SNHG1-220ENST00000544550 IGKV1D-37A0A075B6S9 117 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 A0A087X0K7 114 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 TRAV8-1A0A0A6YYK1 113 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 C3orf85A0A1B0GTC6 90 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 TRDV1A0A1B0GX56 115 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 A4D1N5 150 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 MEIS3P1A6NDR6 274 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 LECT2O14960 151 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 CXCL3P19876 107 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 HRH1P35367 487 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 TCL1AP56279 114 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 LINC01547P58512 204 aaPredicted RBP2.63□□□□□ -1.99
SNHG1-220ENST00000544550 WFDC2Q14508 124 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 LGI3Q8N145 548 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 ARRDC1Q8N5I2 433 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 EIF4E3Q8N5X7 224 aaKnown RBP2.63□□□□□ -1.99
SNHG1-220ENST00000544550 STPG4Q8N801 248 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 C11orf72Q8NBR9 251 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 BPIFCQ8NFQ6 507 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 SLC50A1Q9BRV3 221 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 ANAPC10Q9UM13 185 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 RPH3ALQ9UNE2 315 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 SSR3Q9UNL2 185 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 TPRKBQ9Y3C4 175 aa2.63□□□□□ -1.99
SNHG1-220ENST00000544550 TRAV12-3A0A0B4J271 114 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 A0A0J9YXV3 536 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 RNF222A6NCQ9 220 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 FABP12A6NFH5 140 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 SMIM1B2RUZ4 78 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 GGTLC3B5MD39 225 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 CIDEAO60543 219 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 IGHV3-30P01768 117 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 IGHV3-33P01772 117 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 SLC25A5P05141 298 aaKnown RBP2.62□□□□□ -1.99
SNHG1-220ENST00000544550 PFN1P07737 140 aaKnown RBP2.62□□□□□ -1.99
SNHG1-220ENST00000544550 SEC11BP0C7V7 166 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 IGHV3-30-3P0DP02 117 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 IGHV3-30-5P0DP03 117 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 PGAM2P15259 253 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 ORM2P19652 201 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 RCVRNP35243 200 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 PIGPP57054 158 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 RAB11AP62491 216 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 REG3GQ6UW15 175 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 LCN15Q6UWW0 184 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 CCDC71LQ8N9Z2 235 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 OR1S1Q8NH92 325 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 ZNF431Q8TF32 576 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-220ENST00000544550 BAALCQ8WXS3 180 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 TP53RKQ96S44 253 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 S100A14Q9HCY8 104 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 NDUFB11Q9NX14 153 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 MRPL16Q9NX20 251 aaKnown RBP2.62□□□□□ -1.99
SNHG1-220ENST00000544550 COPZ2Q9P299 210 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 KLF12Q9Y4X4 402 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 TNXBP22105 4242 aa2.62□□□□□ -1.99
SNHG1-220ENST00000544550 SMIM30A4D0T7 59 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms