RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 FAM19A4Q96LR4 140 aa11.53□□□□□ -0.56
CCND1-205ENST00000542367 PYGO2Q9BRQ0 406 aa11.53□□□□□ -0.56
CCND1-205ENST00000542367 MBD2Q9UBB5 411 aa11.53□□□□□ -0.56
CCND1-205ENST00000542367 C7orf71A4D174 169 aa11.52□□□□□ -0.57
CCND1-205ENST00000542367 SNURFLB1AK76 121 aa11.52□□□□□ -0.57
CCND1-205ENST00000542367 IFNA5P01569 189 aa11.52□□□□□ -0.57
CCND1-205ENST00000542367 FFAR4Q5NUL3 377 aa11.52□□□□□ -0.57
CCND1-205ENST00000542367 C9orf47Q6ZRZ4 202 aa11.52□□□□□ -0.57
CCND1-205ENST00000542367 LINC00336Q6ZUF6 198 aa11.52□□□□□ -0.57
CCND1-205ENST00000542367 SCGB1C1Q8TD33 95 aa11.52□□□□□ -0.57
CCND1-205ENST00000542367 IGKV2-40A0A087WW87 121 aaPredicted RBP11.51□□□□□ -0.57
CCND1-205ENST00000542367 KLLNB2CW77 178 aa11.51□□□□□ -0.57
CCND1-205ENST00000542367 OR7C2O60412 319 aa11.51□□□□□ -0.57
CCND1-205ENST00000542367 ZNF324O75467 553 aaPredicted RBP11.51□□□□□ -0.57
CCND1-205ENST00000542367 NUDT3O95989 172 aa11.51□□□□□ -0.57
CCND1-205ENST00000542367 IGKV2D-40P01614 121 aaPredicted RBP11.51□□□□□ -0.57
CCND1-205ENST00000542367 CD300CQ08708 224 aa11.51□□□□□ -0.57
CCND1-205ENST00000542367 BTN1A1Q13410 526 aa11.51□□□□□ -0.57
CCND1-205ENST00000542367 LINC00612Q8N6U2 182 aa11.51□□□□□ -0.57
CCND1-205ENST00000542367 VGLL1Q99990 258 aa11.51□□□□□ -0.57
CCND1-205ENST00000542367 ATG101Q9BSB4 218 aa11.51□□□□□ -0.57
CCND1-205ENST00000542367 ALG5Q9Y673 324 aa11.51□□□□□ -0.57
CCND1-205ENST00000542367 NACAE9PAV3 2078 aa11.51□□□□□ -0.57
CCND1-205ENST00000542367 GAGE12BA1L429 117 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 GAGE7O76087 117 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 GPX1P07203 203 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 GAGE12FP0CL80 117 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 GAGE12GP0CL81 117 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 GAGE12IP0CL82 117 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 CRISP2P16562 243 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 RNASE4P34096 147 aaKnown RBP11.5□□□□□ -0.57
CCND1-205ENST00000542367 RANP62826 216 aaKnown RBP11.5□□□□□ -0.57
CCND1-205ENST00000542367 TMEM78Q5T7P6 136 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 ZNF503Q96F45 646 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 PHYHIPLQ96FC7 376 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 WFDC1Q9HC57 220 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 DNAH17Q9UFH2 4485 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 HECTD4Q9Y4D8 3996 aa11.5□□□□□ -0.57
CCND1-205ENST00000542367 RTL8CO15255 209 aa11.49□□□□□ -0.57
CCND1-205ENST00000542367 OR5I1Q13606 314 aa11.49□□□□□ -0.57
CCND1-205ENST00000542367 Q6ZR54 194 aa11.49□□□□□ -0.57
CCND1-205ENST00000542367 ZNF492Q9P255 531 aa11.49□□□□□ -0.57
CCND1-205ENST00000542367 NMBP08949 121 aa11.48□□□□□ -0.57
CCND1-205ENST00000542367 FAM3BP58499 235 aaPredicted RBP11.48□□□□□ -0.57
CCND1-205ENST00000542367 DAZ2Q13117 558 aaKnown RBP11.48□□□□□ -0.57
CCND1-205ENST00000542367 ZFAND2AQ8N6M9 145 aa11.48□□□□□ -0.57
CCND1-205ENST00000542367 LINC00467Q9BRT7 94 aa11.48□□□□□ -0.57
CCND1-205ENST00000542367 GSN-AS1Q9NRJ2 163 aa11.48□□□□□ -0.57
CCND1-205ENST00000542367 PRSS29PA6NIE9 313 aa11.47□□□□□ -0.57
CCND1-205ENST00000542367 EIF3GO75821 320 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCND1-205ENST00000542367 CSN1S1P47710 185 aa11.47□□□□□ -0.57
CCND1-205ENST00000542367 TAS2R45P59539 299 aa11.47□□□□□ -0.57
CCND1-205ENST00000542367 UBE2L3P68036 154 aaKnown RBP11.47□□□□□ -0.57
CCND1-205ENST00000542367 KHDC3LQ587J8 217 aa11.47□□□□□ -0.57
CCND1-205ENST00000542367 PRR9Q5T870 116 aa11.47□□□□□ -0.57
CCND1-205ENST00000542367 Q6ZTI0 123 aa11.47□□□□□ -0.57
CCND1-205ENST00000542367 LYPD1Q8N2G4 141 aa11.47□□□□□ -0.57
CCND1-205ENST00000542367 EIF4E3Q8N5X7 224 aaKnown RBP11.47□□□□□ -0.57
CCND1-205ENST00000542367 ZNF680Q8NEM1 530 aa11.47□□□□□ -0.57
CCND1-205ENST00000542367 Q9H3A6 140 aa11.47□□□□□ -0.57
CCND1-205ENST00000542367 TRAV26-1A0A087WT03 109 aa11.46□□□□□ -0.57
CCND1-205ENST00000542367 HOXA5P20719 270 aa11.46□□□□□ -0.57
CCND1-205ENST00000542367 ZNF138P52744 262 aa11.46□□□□□ -0.57
CCND1-205ENST00000542367 CCL18P55774 89 aa11.46□□□□□ -0.57
CCND1-205ENST00000542367 ANXA2RQ3ZCQ2 193 aa11.46□□□□□ -0.57
CCND1-205ENST00000542367 Q6ZQT7 251 aa11.46□□□□□ -0.57
CCND1-205ENST00000542367 C11orf72Q8NBR9 251 aa11.46□□□□□ -0.57
CCND1-205ENST00000542367 GNPNAT1Q96EK6 184 aaPredicted RBP11.46□□□□□ -0.57
CCND1-205ENST00000542367 A0A0J9YY99 117 aa11.45□□□□□ -0.58
CCND1-205ENST00000542367 A0A1B0GVY2 172 aa11.45□□□□□ -0.58
CCND1-205ENST00000542367 PTTG1O95997 202 aa11.45□□□□□ -0.58
CCND1-205ENST00000542367 M6PRP20645 277 aa11.45□□□□□ -0.58
CCND1-205ENST00000542367 ACOT6Q3I5F7 207 aaPredicted RBP11.45□□□□□ -0.58
CCND1-205ENST00000542367 Q8TAT8 98 aa11.45□□□□□ -0.58
CCND1-205ENST00000542367 TP53TG3Q9ULZ0 132 aa11.45□□□□□ -0.58
CCND1-205ENST00000542367 KLF12Q9Y4X4 402 aa11.45□□□□□ -0.58
CCND1-205ENST00000542367 A0A1W2PPV4 95 aa11.44□□□□□ -0.58
CCND1-205ENST00000542367 RBAKDNA6NC62 111 aa11.44□□□□□ -0.58
CCND1-205ENST00000542367 RGS13O14921 159 aa11.44□□□□□ -0.58
CCND1-205ENST00000542367 ZNRF2Q8NHG8 242 aa11.44□□□□□ -0.58
CCND1-205ENST00000542367 RXFP4Q8TDU9 374 aa11.44□□□□□ -0.58
CCND1-205ENST00000542367 MED28Q9H204 178 aa11.44□□□□□ -0.58
CCND1-205ENST00000542367 TMPRSS5Q9H3S3 457 aa11.44□□□□□ -0.58
CCND1-205ENST00000542367 LINC00588Q9Y4M8 146 aa11.44□□□□□ -0.58
CCND1-205ENST00000542367 TRGV2A0A075B6R0 118 aa11.43□□□□□ -0.58
CCND1-205ENST00000542367 IGHV1OR15-1A0A075B7D0 117 aa11.43□□□□□ -0.58
CCND1-205ENST00000542367 TRGV1A0A0A0MS02 117 aa11.43□□□□□ -0.58
CCND1-205ENST00000542367 TRBV7-9A0A0J9YWB2 115 aa11.43□□□□□ -0.58
CCND1-205ENST00000542367 DIRC3C9JPN6 131 aa11.43□□□□□ -0.58
CCND1-205ENST00000542367 TCL1AP56279 114 aa11.43□□□□□ -0.58
CCND1-205ENST00000542367 RAB2AP61019 212 aa11.43□□□□□ -0.58
CCND1-205ENST00000542367 SOHLH1Q5JUK2 328 aa11.43□□□□□ -0.58
CCND1-205ENST00000542367 C1orf134Q5TEV5 83 aa11.43□□□□□ -0.58
CCND1-205ENST00000542367 HYLS1Q96M11 299 aa11.43□□□□□ -0.58
CCND1-205ENST00000542367 PGPA6NDG6 321 aa11.42□□□□□ -0.58
CCND1-205ENST00000542367 IBA57Q5T440 356 aaKnown RBP11.42□□□□□ -0.58
CCND1-205ENST00000542367 SSX7Q7RTT5 188 aa11.42□□□□□ -0.58
CCND1-205ENST00000542367 OR10G4Q8NGN3 311 aa11.42□□□□□ -0.58
CCND1-205ENST00000542367 OR10G9Q8NGN4 311 aa11.42□□□□□ -0.58
CCND1-205ENST00000542367 OR10G7Q8NGN6 311 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms