RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 KRTAP27-1Q3LI81 207 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 TMEM155Q4W5P6 130 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 ZC2HC1BQ5TFG8 222 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 PMS2CLQ68D20 193 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 ZNF497Q6ZNH5 498 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 MRPL55Q7Z7F7 128 aaKnown RBP3.37□□□□□ -1.87
SNHG1-219ENST00000542112 ORMDL3Q8N138 153 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 LINC00311Q8N616 119 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 DAND5Q8N907 189 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 BORCS8Q96FH0 119 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 VSIG2Q96IQ7 327 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 BBC3Q96PG8 261 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-219ENST00000542112 METTL26Q96S19 204 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 TAC3Q9UHF0 121 aa3.37□□□□□ -1.87
SNHG1-219ENST00000542112 SNRNP200O75643 2136 aaKnown RBP3.37□□□□□ -1.87
SNHG1-219ENST00000542112 F5P12259 2224 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 TDRD6O60522 2096 aaKnown RBP3.36□□□□□ -1.87
SNHG1-219ENST00000542112 A0A1W2PQD3 144 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 WI2-2373I1.2A0A1W2PRP0 233 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 hADV29S1A0JD25 119 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 H3BSH0 61 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 INAFM2P0DMQ5 153 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 VPREB1P12018 145 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 GP1BBP13224 206 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 FKBP2P26885 142 aaKnown RBP3.36□□□□□ -1.87
SNHG1-219ENST00000542112 IFI27P40305 119 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-219ENST00000542112 EMDP50402 254 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 EDDM3BP56851 147 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 PCSK4Q6UW60 755 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 Q6ZR03 302 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 FOXL2NBQ6ZUU3 175 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 RNF182Q8N6D2 247 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 SMIM14Q96QK8 99 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 S1PR3Q99500 378 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 FAM173AQ9BQD7 235 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 KRTAP4-8Q9BYQ9 185 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 RETNQ9HD89 108 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 CCL28Q9NRJ3 127 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 TRANK1O15050 2925 aa3.36□□□□□ -1.87
SNHG1-219ENST00000542112 HEATR5BQ9P2D3 2071 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 CEP192Q8TEP8 1941 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 IGKV2D-26A0A0A0MRZ7 120 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-219ENST00000542112 LYRM9A8MSI8 78 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 LMO7DNF2Z398 122 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 H3BTX0 84 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 M0R135 149 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 PRYO14603 147 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 IGKV1-39P01597 117 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 IGKV1D-39P04432 117 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 PRSS1P07477 247 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 CFC1BP0CG36 223 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 CFC1P0CG37 223 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 CDAP32320 146 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 RPS27P42677 84 aaKnown RBP3.35□□□□□ -1.87
SNHG1-219ENST00000542112 SYNJ2BPP57105 145 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 HERVK_113P61574 105 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 ERVK-16P61578 105 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 ZNF542PQ5EBM4 170 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 CRIP3Q6Q6R5 217 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 C2orf82Q6UX34 121 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 ZFP2Q6ZN57 461 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 RNF144BQ7Z419 303 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 Q8N8P6 123 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 DSCR8Q96T75 97 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 SLC25A15Q9Y619 301 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 FANCMQ8IYD8 2048 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 ARHGEF17Q96PE2 2063 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-219ENST00000542112 CHD9Q3L8U1 2897 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 GOLGA4Q13439 2230 aaKnown RBP3.35□□□□□ -1.87
SNHG1-219ENST00000542112 PCSK5Q92824 1860 aa3.35□□□□□ -1.87
SNHG1-219ENST00000542112 TRIOBPQ9H2D6 2365 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 CHD7Q9P2D1 2997 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 IGKV1D-13A0A0B4J2D9 117 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 PLAC8L1A1L4L8 177 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 CGB1A6NKQ9 187 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 C17orf100A8MU93 164 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 PRSS46E5RG02 174 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 F8VRH5 84 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 MRPS12O15235 138 aaKnown RBP3.34□□□□□ -1.87
SNHG1-219ENST00000542112 SCRG1O75711 98 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 OXTP01178 125 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 CISD3P0C7P0 127 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 IGKV1-13P0DP09 117 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 GFERP55789 205 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 FGF12P61328 243 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 S100A7L2Q5SY68 101 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 ATP5EP2Q5VTU8 51 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 TDHQ8IZJ6 230 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 VKORC1L1Q8N0U8 176 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 UBALD1Q8TB05 177 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 SPTSSAQ969W0 71 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 SPACA5Q96QH8 159 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 C16orf95Q9H693 158 aa3.34□□□□□ -1.87
SNHG1-219ENST00000542112 DAZ1Q9NQZ3 744 aaKnown RBP3.34□□□□□ -1.87
SNHG1-219ENST00000542112 KLK5Q9Y337 293 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-219ENST00000542112 EML5Q05BV3 1969 aa3.34□□□□□ -1.88
SNHG1-219ENST00000542112 NCOA6Q14686 2063 aaPredicted RBP3.34□□□□□ -1.88
SNHG1-219ENST00000542112 DOCK11Q5JSL3 2073 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms