RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 NDUFB2O95178 105 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 RBP4P02753 201 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 CD3DP04234 171 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 ACYP1P07311 99 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 SCGB1C2P0DMR2 95 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 IGHV3-43DP0DP04 118 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 FGF6P10767 208 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 HLA-DRB4P13762 266 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 MDKP21741 143 aaPredicted RBP2.23□□□□□ -2.05
USP28-210ENST00000542033 CXCL5P42830 114 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 HBG1P69891 147 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 HBG2P69892 147 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 RPL18AQ02543 176 aaKnown RBP2.23□□□□□ -2.05
USP28-210ENST00000542033 ZNF117Q03924 483 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 ZNF726P1Q15940 193 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 C12orf74Q32Q52 190 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 ZNF791Q3KP31 576 aaPredicted RBP2.23□□□□□ -2.05
USP28-210ENST00000542033 FKBP1CQ5VVH2 108 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 C22orf39Q6P5X5 142 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 PRR15Q8IV56 129 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 TMEM61Q8N0U2 210 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 CEND1Q8N111 149 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 RPS4Y2Q8TD47 263 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 TSKUQ8WUA8 353 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 CHCHD1Q96BP2 118 aaKnown RBP2.23□□□□□ -2.05
USP28-210ENST00000542033 FMC1Q96HJ9 113 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 PGLYRP3Q96LB9 341 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 FOXC2Q99958 501 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 PLA2G2FQ9BZM2 168 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 PARP12Q9H0J9 701 aaKnown RBP2.23□□□□□ -2.05
USP28-210ENST00000542033 CCL28Q9NRJ3 127 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 KCNE3Q9Y6H6 103 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 LY96Q9Y6Y9 160 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 HLA-DRB4X5D2U9 266 aa2.23□□□□□ -2.05
USP28-210ENST00000542033 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.22□□□□□ -2.05
USP28-210ENST00000542033 RALGAPA2Q2PPJ7 1873 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 PLXNB2O15031 1838 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 ATRXP46100 2492 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 TRAV4A0A0B4J268 109 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 TRBV7-6A0A0J9YX20 115 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 GRIFINA4D1Z8 144 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 IZUMO1RA6ND01 250 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 A8MWV9 139 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 IGLL5B9A064 214 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 LINC01619G3V211 115 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 K7EQS6 105 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 ATOX1O00244 68 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 SDCBPO00560 298 aaPredicted RBP2.22□□□□□ -2.05
USP28-210ENST00000542033 PEX7O00628 323 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 FFAR1O14842 300 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 HCRTO43612 131 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 PDCD6O75340 191 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 LYZL6O75951 148 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 CST7O76096 145 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 P01737 135 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 GYPBP06028 91 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 COL8A2P25067 703 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 FKBP2P26885 142 aaKnown RBP2.22□□□□□ -2.05
USP28-210ENST00000542033 RPS21P63220 83 aaKnown RBP2.22□□□□□ -2.05
USP28-210ENST00000542033 QRFPP83859 136 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 SERF2P84101 59 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 KRTAP13-3Q3SY46 172 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 FAM78AQ5JUQ0 283 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 AMN1Q8IY45 258 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 CLECL1Q8IZS7 167 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 OR5AS1Q8N127 324 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 DRAM1Q8N682 238 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 MORN4Q8NDC4 146 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 H1FXQ92522 213 aaKnown RBP2.22□□□□□ -2.05
USP28-210ENST00000542033 TMEM230Q96A57 120 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 FAM3DQ96BQ1 224 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 BORCS8Q96FH0 119 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 IMMP1LQ96LU5 166 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 CARD19Q96LW7 228 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 MGST2Q99735 147 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 SHANK2-AS3Q9BTD1 123 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 FAM103A1Q9BTL3 118 aaKnown RBP2.22□□□□□ -2.05
USP28-210ENST00000542033 EMC6Q9BV81 110 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 FAM60AQ9NP50 221 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 IL36BQ9NZH7 164 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 TMEM14AQ9Y6G1 99 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 SERP1Q9Y6X1 66 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 ARL2-SNX15V9GYD0 113 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 PIKFYVEQ9Y2I7 2098 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 MGAMO43451 1857 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 CPAMD8Q8IZJ3 1885 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 NOTCH2Q04721 2471 aa2.22□□□□□ -2.05
USP28-210ENST00000542033 RAI1Q7Z5J4 1906 aaPredicted RBP2.21□□□□□ -2.06
USP28-210ENST00000542033 MDFIC2A0A1B0GVS7 189 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 KNCNA6PVL3 124 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 K7EMT4 169 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 SLC25A14O95258 325 aaPredicted RBP2.21□□□□□ -2.06
USP28-210ENST00000542033 COX6A1P12074 109 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 PEBP1P30086 187 aaKnown RBP2.21□□□□□ -2.06
USP28-210ENST00000542033 CSN1S1P47710 185 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 PRRC2AP48634 2157 aaKnown RBP2.21□□□□□ -2.06
USP28-210ENST00000542033 INSL3P51460 131 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 CCL20P78556 96 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 ADIGQ0VDE8 80 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 INSL4Q14641 139 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms