RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 SNURFLB1AK76 121 aa14.69□□□□□ -0.06
CHFR-217ENST00000540537 KLLNB2CW77 178 aa14.69□□□□□ -0.06
CHFR-217ENST00000540537 MPC2O95563 127 aa14.69□□□□□ -0.06
CHFR-217ENST00000540537 NUDT3O95989 172 aa14.69□□□□□ -0.06
CHFR-217ENST00000540537 NBEAP1P0C6P0 100 aa14.69□□□□□ -0.06
CHFR-217ENST00000540537 AGPAT4-IT1Q9H0P7 198 aa14.69□□□□□ -0.06
CHFR-217ENST00000540537 OR51M1Q9H341 326 aa14.69□□□□□ -0.06
CHFR-217ENST00000540537 C7orf71A4D174 169 aa14.68□□□□□ -0.06
CHFR-217ENST00000540537 ICAM4Q14773 271 aa14.68□□□□□ -0.06
CHFR-217ENST00000540537 C9orf47Q6ZRZ4 202 aa14.68□□□□□ -0.06
CHFR-217ENST00000540537 PAXXQ9BUH6 204 aa14.68□□□□□ -0.06
CHFR-217ENST00000540537 FUT9Q9Y231 359 aa14.68□□□□□ -0.06
CHFR-217ENST00000540537 HSPB11Q9Y547 144 aa14.68□□□□□ -0.06
CHFR-217ENST00000540537 DAZ2Q13117 558 aaKnown RBP14.67□□□□□ -0.06
CHFR-217ENST00000540537 RNF141Q8WVD5 230 aa14.67□□□□□ -0.06
CHFR-217ENST00000540537 FXYD5Q96DB9 178 aa14.67□□□□□ -0.06
CHFR-217ENST00000540537 LINC00467Q9BRT7 94 aa14.67□□□□□ -0.06
CHFR-217ENST00000540537 NMBP08949 121 aa14.66□□□□□ -0.06
CHFR-217ENST00000540537 CRISP2P16562 243 aa14.66□□□□□ -0.06
CHFR-217ENST00000540537 SOHLH1Q5JUK2 328 aa14.66□□□□□ -0.06
CHFR-217ENST00000540537 FAM122CQ6P4D5 195 aa14.66□□□□□ -0.06
CHFR-217ENST00000540537 ZNF680Q8NEM1 530 aa14.66□□□□□ -0.06
CHFR-217ENST00000540537 IGKV2-40A0A087WW87 121 aaPredicted RBP14.65□□□□□ -0.06
CHFR-217ENST00000540537 GAGE12BA1L429 117 aa14.65□□□□□ -0.06
CHFR-217ENST00000540537 ZNF324O75467 553 aaPredicted RBP14.65□□□□□ -0.06
CHFR-217ENST00000540537 GAGE7O76087 117 aa14.65□□□□□ -0.06
CHFR-217ENST00000540537 IGKV2D-40P01614 121 aaPredicted RBP14.65□□□□□ -0.06
CHFR-217ENST00000540537 OR10J4P0C629 311 aa14.65□□□□□ -0.06
CHFR-217ENST00000540537 GAGE12FP0CL80 117 aa14.65□□□□□ -0.06
CHFR-217ENST00000540537 GAGE12GP0CL81 117 aa14.65□□□□□ -0.06
CHFR-217ENST00000540537 GAGE12IP0CL82 117 aa14.65□□□□□ -0.06
CHFR-217ENST00000540537 RPL12P30050 165 aaKnown RBP14.65□□□□□ -0.06
CHFR-217ENST00000540537 BTN1A1Q13410 526 aa14.65□□□□□ -0.06
CHFR-217ENST00000540537 TMEM78Q5T7P6 136 aa14.65□□□□□ -0.06
CHFR-217ENST00000540537 BATF3Q9NR55 127 aa14.65□□□□□ -0.06
CHFR-217ENST00000540537 KIAA1109Q2LD37 5005 aa14.64□□□□□ -0.07
CHFR-217ENST00000540537 OR7C2O60412 319 aa14.64□□□□□ -0.07
CHFR-217ENST00000540537 IFNA5P01569 189 aa14.64□□□□□ -0.07
CHFR-217ENST00000540537 M6PRP20645 277 aa14.64□□□□□ -0.07
CHFR-217ENST00000540537 CCL18P55774 89 aa14.64□□□□□ -0.07
CHFR-217ENST00000540537 CD300CQ08708 224 aa14.64□□□□□ -0.07
CHFR-217ENST00000540537 OR5I1Q13606 314 aa14.64□□□□□ -0.07
CHFR-217ENST00000540537 ANXA2RQ3ZCQ2 193 aa14.64□□□□□ -0.07
CHFR-217ENST00000540537 ZNRF2Q8NHG8 242 aa14.64□□□□□ -0.07
CHFR-217ENST00000540537 PHYHIPLQ96FC7 376 aa14.64□□□□□ -0.07
CHFR-217ENST00000540537 VGLL1Q99990 258 aa14.64□□□□□ -0.07
CHFR-217ENST00000540537 PKD1P98161 4303 aa14.63□□□□□ -0.07
CHFR-217ENST00000540537 GPX1P07203 203 aa14.63□□□□□ -0.07
CHFR-217ENST00000540537 RNASE4P34096 147 aaKnown RBP14.63□□□□□ -0.07
CHFR-217ENST00000540537 FFAR4Q5NUL3 377 aa14.63□□□□□ -0.07
CHFR-217ENST00000540537 C1orf134Q5TEV5 83 aa14.63□□□□□ -0.07
CHFR-217ENST00000540537 EIF4E3Q8N5X7 224 aaKnown RBP14.63□□□□□ -0.07
CHFR-217ENST00000540537 ZFAND2AQ8N6M9 145 aa14.63□□□□□ -0.07
CHFR-217ENST00000540537 C11orf72Q8NBR9 251 aa14.63□□□□□ -0.07
CHFR-217ENST00000540537 SCGB1C1Q8TD33 95 aa14.63□□□□□ -0.07
CHFR-217ENST00000540537 GNPNAT1Q96EK6 184 aaPredicted RBP14.63□□□□□ -0.07
CHFR-217ENST00000540537 ZNF503Q96F45 646 aa14.63□□□□□ -0.07
CHFR-217ENST00000540537 ZNF492Q9P255 531 aa14.63□□□□□ -0.07
CHFR-217ENST00000540537 MBD2Q9UBB5 411 aa14.63□□□□□ -0.07
CHFR-217ENST00000540537 DYNC1H1Q14204 4646 aaKnown RBP14.62□□□□□ -0.07
CHFR-217ENST00000540537 TRAV26-1A0A087WT03 109 aa14.62□□□□□ -0.07
CHFR-217ENST00000540537 HOXA5P20719 270 aa14.62□□□□□ -0.07
CHFR-217ENST00000540537 Q6ZTI0 123 aa14.62□□□□□ -0.07
CHFR-217ENST00000540537 LYPD1Q8N2G4 141 aa14.62□□□□□ -0.07
CHFR-217ENST00000540537 RXFP4Q8TDU9 374 aa14.62□□□□□ -0.07
CHFR-217ENST00000540537 SMIM3Q9BZL3 60 aa14.62□□□□□ -0.07
CHFR-217ENST00000540537 LINC00588Q9Y4M8 146 aa14.62□□□□□ -0.07
CHFR-217ENST00000540537 DNAH11Q96DT5 4516 aa14.61□□□□□ -0.07
CHFR-217ENST00000540537 TRBV7-9A0A0J9YWB2 115 aa14.61□□□□□ -0.07
CHFR-217ENST00000540537 H3BNG1 76 aa14.61□□□□□ -0.07
CHFR-217ENST00000540537 TAS2R45P59539 299 aa14.61□□□□□ -0.07
CHFR-217ENST00000540537 UBE2L3P68036 154 aaKnown RBP14.61□□□□□ -0.07
CHFR-217ENST00000540537 KHDC3LQ587J8 217 aa14.61□□□□□ -0.07
CHFR-217ENST00000540537 C18orf15Q96N68 181 aa14.61□□□□□ -0.07
CHFR-217ENST00000540537 GSN-AS1Q9NRJ2 163 aa14.61□□□□□ -0.07
CHFR-217ENST00000540537 NBDYA0A0U1RRE5 68 aa14.6□□□□□ -0.07
CHFR-217ENST00000540537 RBAKDNA6NC62 111 aa14.6□□□□□ -0.07
CHFR-217ENST00000540537 CSN1S1P47710 185 aa14.6□□□□□ -0.07
CHFR-217ENST00000540537 ZNF138P52744 262 aa14.6□□□□□ -0.07
CHFR-217ENST00000540537 PRR9Q5T870 116 aa14.6□□□□□ -0.07
CHFR-217ENST00000540537 Q9H3A6 140 aa14.6□□□□□ -0.07
CHFR-217ENST00000540537 TMPRSS5Q9H3S3 457 aa14.6□□□□□ -0.07
CHFR-217ENST00000540537 MUC4Q99102 2169 aa14.59□□□□□ -0.07
CHFR-217ENST00000540537 A0A0J9YY99 117 aa14.59□□□□□ -0.07
CHFR-217ENST00000540537 RGS13O14921 159 aa14.59□□□□□ -0.07
CHFR-217ENST00000540537 TCL1AP56279 114 aa14.59□□□□□ -0.07
CHFR-217ENST00000540537 RANP62826 216 aaKnown RBP14.59□□□□□ -0.07
CHFR-217ENST00000540537 IBA57Q5T440 356 aaKnown RBP14.59□□□□□ -0.07
CHFR-217ENST00000540537 SSX7Q7RTT5 188 aa14.59□□□□□ -0.07
CHFR-217ENST00000540537 TRGV2A0A075B6R0 118 aa14.58□□□□□ -0.08
CHFR-217ENST00000540537 WFDC1Q9HC57 220 aa14.58□□□□□ -0.08
CHFR-217ENST00000540537 IGHV1OR15-1A0A075B7D0 117 aa14.57□□□□□ -0.08
CHFR-217ENST00000540537 TRGV1A0A0A0MS02 117 aa14.57□□□□□ -0.08
CHFR-217ENST00000540537 SPINK4O60575 86 aa14.57□□□□□ -0.08
CHFR-217ENST00000540537 Q8TAT8 98 aa14.57□□□□□ -0.08
CHFR-217ENST00000540537 ALG5Q9Y673 324 aa14.57□□□□□ -0.08
CHFR-217ENST00000540537 ACOT6Q3I5F7 207 aaPredicted RBP14.56□□□□□ -0.08
CHFR-217ENST00000540537 KLF12Q9Y4X4 402 aa14.56□□□□□ -0.08
CHFR-217ENST00000540537 ZNF266Q14584 549 aa14.55□□□□□ -0.08
CHFR-217ENST00000540537 Q6ZQT7 251 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms