RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 WDR61Q9GZS3 305 aaKnown RBP15.53■□□□□ 0.08
SCARB1-206ENST00000539320 GAGE12BA1L429 117 aa15.52■□□□□ 0.08
SCARB1-206ENST00000539320 GAGE7O76087 117 aa15.52■□□□□ 0.08
SCARB1-206ENST00000539320 GAGE12FP0CL80 117 aa15.52■□□□□ 0.08
SCARB1-206ENST00000539320 GAGE12GP0CL81 117 aa15.52■□□□□ 0.08
SCARB1-206ENST00000539320 GAGE12IP0CL82 117 aa15.52■□□□□ 0.08
SCARB1-206ENST00000539320 CCL18P55774 89 aa15.52■□□□□ 0.08
SCARB1-206ENST00000539320 ZNRF2Q8NHG8 242 aa15.52■□□□□ 0.08
SCARB1-206ENST00000539320 LINC00477Q96M19 166 aa15.52■□□□□ 0.08
SCARB1-206ENST00000539320 MRPL32Q9BYC8 188 aaKnown RBP15.52■□□□□ 0.08
SCARB1-206ENST00000539320 KLLNB2CW77 178 aa15.51■□□□□ 0.07
SCARB1-206ENST00000539320 OR5I1Q13606 314 aa15.51■□□□□ 0.07
SCARB1-206ENST00000539320 ICAM4Q14773 271 aa15.51■□□□□ 0.07
SCARB1-206ENST00000539320 PPP1R1CQ8WVI7 109 aa15.51■□□□□ 0.07
SCARB1-206ENST00000539320 FAM19A4Q96LR4 140 aa15.51■□□□□ 0.07
SCARB1-206ENST00000539320 MARVELD1Q9BSK0 173 aa15.51■□□□□ 0.07
SCARB1-206ENST00000539320 AGPAT4-IT1Q9H0P7 198 aa15.51■□□□□ 0.07
SCARB1-206ENST00000539320 IGKV2-40A0A087WW87 121 aaPredicted RBP15.5■□□□□ 0.07
SCARB1-206ENST00000539320 IGKV2D-40P01614 121 aaPredicted RBP15.5■□□□□ 0.07
SCARB1-206ENST00000539320 M6PRP20645 277 aa15.5■□□□□ 0.07
SCARB1-206ENST00000539320 H2BFSP57053 126 aa15.5■□□□□ 0.07
SCARB1-206ENST00000539320 DAZ2Q13117 558 aaKnown RBP15.5■□□□□ 0.07
SCARB1-206ENST00000539320 BTN1A1Q13410 526 aa15.5■□□□□ 0.07
SCARB1-206ENST00000539320 ZNF680Q8NEM1 530 aa15.5■□□□□ 0.07
SCARB1-206ENST00000539320 OR51M1Q9H341 326 aa15.5■□□□□ 0.07
SCARB1-206ENST00000539320 PKD1P98161 4303 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 TRAV26-1A0A087WT03 109 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 C17orf112F2Z3M2 114 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 PTTG1O95997 202 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 NBEAP1P0C6P0 100 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 CRISP2P16562 243 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 FAM122CQ6P4D5 195 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 C9orf47Q6ZRZ4 202 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 GNPNAT1Q96EK6 184 aaPredicted RBP15.49■□□□□ 0.07
SCARB1-206ENST00000539320 ATP5SQ99766 215 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 PAXXQ9BUH6 204 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 FUT9Q9Y231 359 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 LINC00588Q9Y4M8 146 aa15.49■□□□□ 0.07
SCARB1-206ENST00000539320 NBDYA0A0U1RRE5 68 aa15.48■□□□□ 0.07
SCARB1-206ENST00000539320 SSNA1O43805 119 aa15.48■□□□□ 0.07
SCARB1-206ENST00000539320 PET100P0DJ07 73 aa15.48■□□□□ 0.07
SCARB1-206ENST00000539320 HOXA5P20719 270 aa15.48■□□□□ 0.07
SCARB1-206ENST00000539320 CD300CQ08708 224 aa15.48■□□□□ 0.07
SCARB1-206ENST00000539320 TMEM78Q5T7P6 136 aa15.48■□□□□ 0.07
SCARB1-206ENST00000539320 Q6ZTI0 123 aa15.48■□□□□ 0.07
SCARB1-206ENST00000539320 RXFP4Q8TDU9 374 aa15.48■□□□□ 0.07
SCARB1-206ENST00000539320 LINC00467Q9BRT7 94 aa15.48■□□□□ 0.07
SCARB1-206ENST00000539320 HSPB11Q9Y547 144 aa15.48■□□□□ 0.07
SCARB1-206ENST00000539320 OR10J4P0C629 311 aa15.47■□□□□ 0.07
SCARB1-206ENST00000539320 EIF4E3Q8N5X7 224 aaKnown RBP15.47■□□□□ 0.07
SCARB1-206ENST00000539320 C11orf72Q8NBR9 251 aa15.47■□□□□ 0.07
SCARB1-206ENST00000539320 FXYD5Q96DB9 178 aa15.47■□□□□ 0.07
SCARB1-206ENST00000539320 ZNF503Q96F45 646 aa15.47■□□□□ 0.07
SCARB1-206ENST00000539320 PHYHIPLQ96FC7 376 aa15.47■□□□□ 0.07
SCARB1-206ENST00000539320 TMPRSS5Q9H3S3 457 aa15.47■□□□□ 0.07
SCARB1-206ENST00000539320 GSN-AS1Q9NRJ2 163 aa15.47■□□□□ 0.07
SCARB1-206ENST00000539320 A0A0J9YY99 117 aa15.46■□□□□ 0.07
SCARB1-206ENST00000539320 OR7C2O60412 319 aa15.46■□□□□ 0.07
SCARB1-206ENST00000539320 ZNF324O75467 553 aaPredicted RBP15.46■□□□□ 0.07
SCARB1-206ENST00000539320 MPC2O95563 127 aa15.46■□□□□ 0.07
SCARB1-206ENST00000539320 NMBP08949 121 aa15.46■□□□□ 0.07
SCARB1-206ENST00000539320 RNASE4P34096 147 aaKnown RBP15.46■□□□□ 0.07
SCARB1-206ENST00000539320 ANXA2RQ3ZCQ2 193 aa15.46■□□□□ 0.07
SCARB1-206ENST00000539320 SSX7Q7RTT5 188 aa15.46■□□□□ 0.07
SCARB1-206ENST00000539320 ZFAND2AQ8N6M9 145 aa15.46■□□□□ 0.07
SCARB1-206ENST00000539320 VGLL1Q99990 258 aa15.46■□□□□ 0.07
SCARB1-206ENST00000539320 GPX1P07203 203 aa15.45■□□□□ 0.06
SCARB1-206ENST00000539320 PRR9Q5T870 116 aa15.45■□□□□ 0.06
SCARB1-206ENST00000539320 MUC4Q99102 2169 aa15.44■□□□□ 0.06
SCARB1-206ENST00000539320 MED14OSP0DP75 135 aa15.44■□□□□ 0.06
SCARB1-206ENST00000539320 UBE2L3P68036 154 aaKnown RBP15.44■□□□□ 0.06
SCARB1-206ENST00000539320 FFAR4Q5NUL3 377 aa15.44■□□□□ 0.06
SCARB1-206ENST00000539320 ZNF492Q9P255 531 aa15.44■□□□□ 0.06
SCARB1-206ENST00000539320 TRGV2A0A075B6R0 118 aa15.43■□□□□ 0.06
SCARB1-206ENST00000539320 TRGV1A0A0A0MS02 117 aa15.43■□□□□ 0.06
SCARB1-206ENST00000539320 H3BNG1 76 aa15.43■□□□□ 0.06
SCARB1-206ENST00000539320 IFNA5P01569 189 aa15.43■□□□□ 0.06
SCARB1-206ENST00000539320 TCL1AP56279 114 aa15.43■□□□□ 0.06
SCARB1-206ENST00000539320 C6orf223Q8N319 242 aa15.43■□□□□ 0.06
SCARB1-206ENST00000539320 C18orf15Q96N68 181 aa15.43■□□□□ 0.06
SCARB1-206ENST00000539320 SMIM3Q9BZL3 60 aa15.43■□□□□ 0.06
SCARB1-206ENST00000539320 MBD2Q9UBB5 411 aa15.43■□□□□ 0.06
SCARB1-206ENST00000539320 RGS13O14921 159 aa15.42■□□□□ 0.06
SCARB1-206ENST00000539320 RPL12P30050 165 aaKnown RBP15.42■□□□□ 0.06
SCARB1-206ENST00000539320 CSN1S1P47710 185 aa15.42■□□□□ 0.06
SCARB1-206ENST00000539320 ZNF138P52744 262 aa15.42■□□□□ 0.06
SCARB1-206ENST00000539320 KHDC3LQ587J8 217 aa15.42■□□□□ 0.06
SCARB1-206ENST00000539320 IBA57Q5T440 356 aaKnown RBP15.42■□□□□ 0.06
SCARB1-206ENST00000539320 Q8TAT8 98 aa15.42■□□□□ 0.06
SCARB1-206ENST00000539320 SCGB1C1Q8TD33 95 aa15.42■□□□□ 0.06
SCARB1-206ENST00000539320 KRTAP17-1Q9BYP8 105 aa15.42■□□□□ 0.06
SCARB1-206ENST00000539320 TRBV7-9A0A0J9YWB2 115 aa15.41■□□□□ 0.06
SCARB1-206ENST00000539320 LYPD1Q8N2G4 141 aa15.41■□□□□ 0.06
SCARB1-206ENST00000539320 ARPC5LQ9BPX5 153 aa15.41■□□□□ 0.06
SCARB1-206ENST00000539320 Q9H3A6 140 aa15.41■□□□□ 0.06
SCARB1-206ENST00000539320 KLF12Q9Y4X4 402 aa15.41■□□□□ 0.06
SCARB1-206ENST00000539320 IGHV1OR15-1A0A075B7D0 117 aa15.4■□□□□ 0.06
SCARB1-206ENST00000539320 SPINK4O60575 86 aa15.4■□□□□ 0.06
SCARB1-206ENST00000539320 TAS2R45P59539 299 aa15.4■□□□□ 0.06
SCARB1-206ENST00000539320 RANP62826 216 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms