RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 K7EP13 123 aa7.31□□□□□ -1.24
CSDE1-217ENST00000534699 NHLH2Q02577 135 aa7.31□□□□□ -1.24
CSDE1-217ENST00000534699 RNF141Q8WVD5 230 aa7.31□□□□□ -1.24
CSDE1-217ENST00000534699 ATG101Q9BSB4 218 aa7.31□□□□□ -1.24
CSDE1-217ENST00000534699 SSNA1O43805 119 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 ZNF324O75467 553 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-217ENST00000534699 MBP02144 154 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 M6PRP20645 277 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 RPL12P30050 165 aaKnown RBP7.3□□□□□ -1.24
CSDE1-217ENST00000534699 ZNF138P52744 262 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 TCL1AP56279 114 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 ZNF767PQ75MW2 155 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 OR2G3Q8NGZ4 309 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 FXYD5Q96DB9 178 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 SPXQ9BT56 116 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 PSMG3Q9BT73 122 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-217ENST00000534699 OR5AC2Q9NZP5 309 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 BIRC6Q9NR09 4857 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 TRAV12-2A0A075B6T6 113 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 TRAV5A0A0B4J249 113 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 A0A1B0GVY2 172 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 F5H768 121 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 H0YIZ8 118 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 AZU1P20160 251 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 IQCF2Q8IXL9 164 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 OTORQ9NRC9 128 aa7.3□□□□□ -1.24
CSDE1-217ENST00000534699 PRAC2D3DTV9 90 aa7.29□□□□□ -1.24
CSDE1-217ENST00000534699 IFITM3Q01628 133 aa7.29□□□□□ -1.24
CSDE1-217ENST00000534699 C1orf134Q5TEV5 83 aa7.29□□□□□ -1.24
CSDE1-217ENST00000534699 THAP6Q8TBB0 222 aa7.29□□□□□ -1.24
CSDE1-217ENST00000534699 AGPAT4-IT1Q9H0P7 198 aa7.29□□□□□ -1.24
CSDE1-217ENST00000534699 hCG_2014768A0A024R1R8 64 aa7.29□□□□□ -1.24
CSDE1-217ENST00000534699 SPINK4O60575 86 aa7.29□□□□□ -1.24
CSDE1-217ENST00000534699 Q6AWC8 147 aa7.29□□□□□ -1.24
CSDE1-217ENST00000534699 TRGV11A0A075B6L2 103 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 PRSS29PA6NIE9 313 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 H2BFSP57053 126 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 SERF2P84101 59 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 ZNF415Q09FC8 603 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 ICAM4Q14773 271 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 NOP10Q9NPE3 64 aaKnown RBP7.28□□□□□ -1.24
CSDE1-217ENST00000534699 MRPS16Q9Y3D3 137 aaKnown RBP7.28□□□□□ -1.24
CSDE1-217ENST00000534699 IGHV1OR15-1A0A075B7D0 117 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 GPX1P07203 203 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 DEFB130BP0DP73 79 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 DEFB130AP0DP74 79 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 HTN3P15516 51 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 FFAR4Q5NUL3 377 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 MIR17HGQ75NE6 70 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 C11orf72Q8NBR9 251 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 SUN5Q8TC36 379 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 PTH2Q96A98 100 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 GNPNAT1Q96EK6 184 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-217ENST00000534699 VGLL1Q99990 258 aa7.28□□□□□ -1.24
CSDE1-217ENST00000534699 CLINT1Q14677 625 aa7.27□□□□□ -1.25
CSDE1-217ENST00000534699 SH2D6Q7Z4S9 175 aa7.27□□□□□ -1.25
CSDE1-217ENST00000534699 ZFAND2AQ8N6M9 145 aa7.27□□□□□ -1.25
CSDE1-217ENST00000534699 ZNRF2Q8NHG8 242 aa7.27□□□□□ -1.25
CSDE1-217ENST00000534699 AQP10Q96PS8 301 aa7.27□□□□□ -1.25
CSDE1-217ENST00000534699 KLF12Q9Y4X4 402 aa7.27□□□□□ -1.25
CSDE1-217ENST00000534699 NACAE9PAV3 2078 aa7.27□□□□□ -1.25
CSDE1-217ENST00000534699 NBDYA0A0U1RRE5 68 aa7.27□□□□□ -1.25
CSDE1-217ENST00000534699 TDRG1Q3Y452 100 aa7.27□□□□□ -1.25
CSDE1-217ENST00000534699 ST6GAL2Q96JF0 529 aa7.27□□□□□ -1.25
CSDE1-217ENST00000534699 TRAV12-3A0A0B4J271 114 aa7.26□□□□□ -1.25
CSDE1-217ENST00000534699 RGS13O14921 159 aa7.26□□□□□ -1.25
CSDE1-217ENST00000534699 RTL8CO15255 209 aa7.26□□□□□ -1.25
CSDE1-217ENST00000534699 SIX6O95475 246 aa7.26□□□□□ -1.25
CSDE1-217ENST00000534699 PYYP10082 97 aa7.26□□□□□ -1.25
CSDE1-217ENST00000534699 ARPC5LQ9BPX5 153 aa7.26□□□□□ -1.25
CSDE1-217ENST00000534699 A0A1W2PPV4 95 aa7.26□□□□□ -1.25
CSDE1-217ENST00000534699 GIPP09681 153 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-217ENST00000534699 UBE2L3P68036 154 aaKnown RBP7.26□□□□□ -1.25
CSDE1-217ENST00000534699 Q9H3A6 140 aa7.26□□□□□ -1.25
CSDE1-217ENST00000534699 DIRC3C9JPN6 131 aa7.25□□□□□ -1.25
CSDE1-217ENST00000534699 OR7C2O60412 319 aa7.25□□□□□ -1.25
CSDE1-217ENST00000534699 C6orf223Q8N319 242 aa7.25□□□□□ -1.25
CSDE1-217ENST00000534699 BLNKQ8WV28 456 aa7.25□□□□□ -1.25
CSDE1-217ENST00000534699 KCNS1Q96KK3 526 aa7.25□□□□□ -1.25
CSDE1-217ENST00000534699 MBD2Q9UBB5 411 aa7.25□□□□□ -1.25
CSDE1-217ENST00000534699 K7EQM0 130 aa7.25□□□□□ -1.25
CSDE1-217ENST00000534699 ATP6V1G1O75348 118 aa7.25□□□□□ -1.25
CSDE1-217ENST00000534699 CMTM2Q8TAZ6 248 aa7.25□□□□□ -1.25
CSDE1-217ENST00000534699 TMEM167BQ9NRX6 74 aa7.25□□□□□ -1.25
CSDE1-217ENST00000534699 M0R3E3 92 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 ORM1P02763 201 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 MED14OSP0DP75 135 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 TIRAPP58753 221 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 LRRC37A5PQ49AS3 106 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 PIK3CD-AS1Q5SR53 167 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 EXOC3-AS1Q8N2X6 119 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 OR10G4Q8NGN3 311 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 MED28Q9H204 178 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 SH3BGRL3Q9H299 93 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 VPS13DQ5THJ4 4388 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 NUDT3O95989 172 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 RNASE4P34096 147 aaKnown RBP7.24□□□□□ -1.25
CSDE1-217ENST00000534699 TCEAL7Q9BRU2 100 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 NDFIP1Q9BT67 221 aa7.24□□□□□ -1.25
CSDE1-217ENST00000534699 NKX6-2Q9C056 277 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms