RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 GCSAMLQ5JQS6 135 aa11.67□□□□□ -0.54
CPSF1-207ENST00000531727 LINC00299Q6ZSB3 139 aa11.67□□□□□ -0.54
CPSF1-207ENST00000531727 Q6ZTI0 123 aa11.67□□□□□ -0.54
CPSF1-207ENST00000531727 EXOC3-AS1Q8N2X6 119 aa11.67□□□□□ -0.54
CPSF1-207ENST00000531727 BLNKQ8WV28 456 aa11.67□□□□□ -0.54
CPSF1-207ENST00000531727 LINC00467Q9BRT7 94 aa11.67□□□□□ -0.54
CPSF1-207ENST00000531727 AGPAT4-IT1Q9H0P7 198 aa11.67□□□□□ -0.54
CPSF1-207ENST00000531727 RYR1P21817 5038 aa11.67□□□□□ -0.54
CPSF1-207ENST00000531727 ZNF324O75467 553 aaPredicted RBP11.66□□□□□ -0.54
CPSF1-207ENST00000531727 NHLH2Q02577 135 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 CD300CQ08708 224 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 BTN1A1Q13410 526 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 ESRGQ1W209 222 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 TTC32Q5I0X7 151 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 C9orf47Q6ZRZ4 202 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 C11orf72Q8NBR9 251 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 C18orf15Q96N68 181 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 UPK3BQ9BT76 320 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 SLC25A2Q9BXI2 301 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 AAMDCQ9H7C9 122 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 GSN-AS1Q9NRJ2 163 aa11.66□□□□□ -0.54
CPSF1-207ENST00000531727 C16orf90A8MZG2 172 aa11.65□□□□□ -0.54
CPSF1-207ENST00000531727 CRISP2P16562 243 aa11.65□□□□□ -0.54
CPSF1-207ENST00000531727 ICAM4Q14773 271 aa11.65□□□□□ -0.54
CPSF1-207ENST00000531727 ANXA2RQ3ZCQ2 193 aa11.65□□□□□ -0.54
CPSF1-207ENST00000531727 EIF4E3Q8N5X7 224 aaKnown RBP11.65□□□□□ -0.54
CPSF1-207ENST00000531727 OR5C1Q8NGR4 320 aa11.65□□□□□ -0.54
CPSF1-207ENST00000531727 THAP6Q8TBB0 222 aa11.65□□□□□ -0.54
CPSF1-207ENST00000531727 S100ZQ8WXG8 99 aa11.65□□□□□ -0.54
CPSF1-207ENST00000531727 FAM167A-AS1Q96KT0 104 aa11.65□□□□□ -0.54
CPSF1-207ENST00000531727 SLC25A31Q9H0C2 315 aa11.65□□□□□ -0.54
CPSF1-207ENST00000531727 Q9H3A6 140 aa11.65□□□□□ -0.54
CPSF1-207ENST00000531727 MRPS16Q9Y3D3 137 aaKnown RBP11.65□□□□□ -0.54
CPSF1-207ENST00000531727 MUC4Q99102 2169 aa11.64□□□□□ -0.55
CPSF1-207ENST00000531727 TRGV2A0A075B6R0 118 aa11.64□□□□□ -0.55
CPSF1-207ENST00000531727 E5RGE8 158 aa11.64□□□□□ -0.55
CPSF1-207ENST00000531727 SIX6O95475 246 aa11.64□□□□□ -0.55
CPSF1-207ENST00000531727 NMBP08949 121 aa11.64□□□□□ -0.55
CPSF1-207ENST00000531727 RNASE4P34096 147 aaKnown RBP11.64□□□□□ -0.55
CPSF1-207ENST00000531727 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
CPSF1-207ENST00000531727 KRTAP1-5Q9BYS1 174 aa11.64□□□□□ -0.55
CPSF1-207ENST00000531727 IGKV2-40A0A087WW87 121 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-207ENST00000531727 TRGV1A0A0A0MS02 117 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 IGKV2D-40P01614 121 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-207ENST00000531727 GPX1P07203 203 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 NBEAP1P0C6P0 100 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 TMEM78Q5T7P6 136 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 FAM122CQ6P4D5 195 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 ENKURQ8TC29 256 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 VSIG2Q96IQ7 327 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 NMES1Q9C002 83 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 OR51M1Q9H341 326 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 KCNIP2Q9NS61 270 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 OR5AC2Q9NZP5 309 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 FUT9Q9Y231 359 aa11.63□□□□□ -0.55
CPSF1-207ENST00000531727 A0A1W2PPQ1 181 aa11.62□□□□□ -0.55
CPSF1-207ENST00000531727 SPINK4O60575 86 aa11.62□□□□□ -0.55
CPSF1-207ENST00000531727 TCL1AP56279 114 aa11.62□□□□□ -0.55
CPSF1-207ENST00000531727 IBA57Q5T440 356 aaKnown RBP11.62□□□□□ -0.55
CPSF1-207ENST00000531727 ZFAND2AQ8N6M9 145 aa11.62□□□□□ -0.55
CPSF1-207ENST00000531727 VGLL1Q99990 258 aa11.62□□□□□ -0.55
CPSF1-207ENST00000531727 MRPL32Q9BYC8 188 aaKnown RBP11.62□□□□□ -0.55
CPSF1-207ENST00000531727 KLF12Q9Y4X4 402 aa11.62□□□□□ -0.55
CPSF1-207ENST00000531727 HSPG2P98160 4391 aa11.62□□□□□ -0.55
CPSF1-207ENST00000531727 A0A096LPF7 62 aa11.61□□□□□ -0.55
CPSF1-207ENST00000531727 H0YIZ8 118 aa11.61□□□□□ -0.55
CPSF1-207ENST00000531727 RGS13O14921 159 aa11.61□□□□□ -0.55
CPSF1-207ENST00000531727 CDK2AP2O75956 126 aa11.61□□□□□ -0.55
CPSF1-207ENST00000531727 LRRC37A5PQ49AS3 106 aa11.61□□□□□ -0.55
CPSF1-207ENST00000531727 PRR9Q5T870 116 aa11.61□□□□□ -0.55
CPSF1-207ENST00000531727 FXYD5Q96DB9 178 aa11.61□□□□□ -0.55
CPSF1-207ENST00000531727 PAXXQ9BUH6 204 aa11.61□□□□□ -0.55
CPSF1-207ENST00000531727 WDR61Q9GZS3 305 aaKnown RBP11.61□□□□□ -0.55
CPSF1-207ENST00000531727 ZNF492Q9P255 531 aa11.61□□□□□ -0.55
CPSF1-207ENST00000531727 PRAF2O60831 178 aa11.6□□□□□ -0.55
CPSF1-207ENST00000531727 UPK1BO75841 260 aa11.6□□□□□ -0.55
CPSF1-207ENST00000531727 OR10J4P0C629 311 aa11.6□□□□□ -0.55
CPSF1-207ENST00000531727 ZNF138P52744 262 aa11.6□□□□□ -0.55
CPSF1-207ENST00000531727 CYCSP99999 105 aaKnown RBP11.6□□□□□ -0.55
CPSF1-207ENST00000531727 PHYHIPLQ96FC7 376 aa11.6□□□□□ -0.55
CPSF1-207ENST00000531727 KRTAP4-5Q9BYR2 181 aa11.6□□□□□ -0.55
CPSF1-207ENST00000531727 TP53TG3Q9ULZ0 132 aa11.6□□□□□ -0.55
CPSF1-207ENST00000531727 ABCA13Q86UQ4 5058 aa11.59□□□□□ -0.55
CPSF1-207ENST00000531727 IGHV1OR15-1A0A075B7D0 117 aa11.59□□□□□ -0.55
CPSF1-207ENST00000531727 TRBV7-9A0A0J9YWB2 115 aa11.59□□□□□ -0.55
CPSF1-207ENST00000531727 C17orf112F2Z3M2 114 aa11.59□□□□□ -0.55
CPSF1-207ENST00000531727 BTF3P20290 206 aaKnown RBP11.59□□□□□ -0.55
CPSF1-207ENST00000531727 ST6GAL2Q96JF0 529 aa11.59□□□□□ -0.55
CPSF1-207ENST00000531727 OR7C2O60412 319 aa11.58□□□□□ -0.56
CPSF1-207ENST00000531727 Q6ZQT7 251 aa11.58□□□□□ -0.56
CPSF1-207ENST00000531727 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
CPSF1-207ENST00000531727 ARPC5LQ9BPX5 153 aa11.58□□□□□ -0.56
CPSF1-207ENST00000531727 MRPL16Q9NX20 251 aaKnown RBP11.58□□□□□ -0.56
CPSF1-207ENST00000531727 LRP1BQ9NZR2 4599 aa11.57□□□□□ -0.56
CPSF1-207ENST00000531727 RBAKDNA6NC62 111 aa11.57□□□□□ -0.56
CPSF1-207ENST00000531727 INMT-MINDY4F8WBC2 141 aa11.57□□□□□ -0.56
CPSF1-207ENST00000531727 CSN1S1P47710 185 aa11.57□□□□□ -0.56
CPSF1-207ENST00000531727 H2BFSP57053 126 aa11.57□□□□□ -0.56
CPSF1-207ENST00000531727 IFITM3Q01628 133 aa11.57□□□□□ -0.56
CPSF1-207ENST00000531727 LYPD1Q8N2G4 141 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms