RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.98□□□□□ -1.29
SDCBP-212ENST00000523483 OCC1Q8TAD7 63 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 C8orf49Q96NF6 230 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 NDFIP1Q9BT67 221 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 AGPAT4-IT1Q9H0P7 198 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 MAP6D1Q9H9H5 199 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 RPS10P5Q9NQ39 176 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 HTN1P15515 57 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 S100A1P23297 94 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 GTSCR1Q86UQ5 136 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 TVP23CQ96ET8 276 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 NAT8Q9UHE5 227 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 NAGKQ9UJ70 344 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 M0R2Z0 102 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 CT45A10P0DMU9 189 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 RPL35AP18077 110 aaKnown RBP6.97□□□□□ -1.29
SDCBP-212ENST00000523483 ERVFC1-1P60608 527 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 SVBPQ8N300 66 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 FMC1Q96HJ9 113 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 PRR25Q96S07 402 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 PRELID1Q9Y255 219 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 TRAV12-2A0A075B6T6 113 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 TMSB15BA0A087X1C1 80 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 ODF3L2Q3SX64 289 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 Q86TA4 180 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 C11orf52Q96A22 123 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 RNASE7Q9H1E1 156 aaKnown RBP6.97□□□□□ -1.29
SDCBP-212ENST00000523483 ZNF256Q9Y2P7 627 aaPredicted RBP6.97□□□□□ -1.29
SDCBP-212ENST00000523483 PRB2P02812 416 aaPredicted RBP6.97□□□□□ -1.29
SDCBP-212ENST00000523483 KIR3DS1Q14943 382 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 TMEM183BQ1AE95 376 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 SPINK13Q1W4C9 94 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 SAMD13Q5VXD3 122 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 STHQ8IWL8 128 aa6.97□□□□□ -1.29
SDCBP-212ENST00000523483 MCRIP2Q9BUT9 160 aaKnown RBP6.97□□□□□ -1.29
SDCBP-212ENST00000523483 GCGP01275 180 aa6.96□□□□□ -1.29
SDCBP-212ENST00000523483 RPL23P62829 140 aaKnown RBP6.96□□□□□ -1.29
SDCBP-212ENST00000523483 SIGLEC8Q9NYZ4 499 aa6.96□□□□□ -1.29
SDCBP-212ENST00000523483 URGCP-MRPS24S4R325 110 aa6.96□□□□□ -1.29
SDCBP-212ENST00000523483 IGHV3OR16-12A0A075B7B8 117 aa6.96□□□□□ -1.3
SDCBP-212ENST00000523483 GPX1P07203 203 aa6.96□□□□□ -1.3
SDCBP-212ENST00000523483 ZNF138P52744 262 aa6.96□□□□□ -1.3
SDCBP-212ENST00000523483 TMEM88Q6PEY1 159 aa6.96□□□□□ -1.3
SDCBP-212ENST00000523483 ATRAIDQ6UW56 229 aa6.96□□□□□ -1.3
SDCBP-212ENST00000523483 LINC01551Q86U37 167 aa6.96□□□□□ -1.3
SDCBP-212ENST00000523483 DEFB125Q8N687 156 aa6.96□□□□□ -1.3
SDCBP-212ENST00000523483 DAZAP1Q96EP5 407 aaKnown RBP6.96□□□□□ -1.3
SDCBP-212ENST00000523483 TPPP3Q9BW30 176 aa6.96□□□□□ -1.3
SDCBP-212ENST00000523483 TRAV25A0A0B4J276 109 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 G3V4G9 280 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 INSL3P51460 131 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 CA1P00915 261 aaPredicted RBP6.95□□□□□ -1.3
SDCBP-212ENST00000523483 IGLV2-11P01706 119 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 RNASE4P34096 147 aaKnown RBP6.95□□□□□ -1.3
SDCBP-212ENST00000523483 TMEM75Q8N9X5 138 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 SDF2L1Q9HCN8 221 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 K7EN84 100 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 SNAPINO95295 136 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 TAS2R60P59551 318 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 FAM74A3Q4VXF1 159 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
SDCBP-212ENST00000523483 A0A0J9YX75 114 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 MUC21Q5SSG8 566 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 Q6ZQT7 251 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 ZC2HC1AQ96GY0 325 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 TIMM8BQ9Y5J9 83 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-212ENST00000523483 C7orf77A4D0Y5 90 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 ORM1P02763 201 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 TCL1AP56279 114 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 RPL19P84098 196 aaKnown RBP6.94□□□□□ -1.3
SDCBP-212ENST00000523483 RNF212Q495C1 297 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 PRR31Q5SQ13 230 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 WFDC9Q8NEX5 89 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 IGF2BP2-AS1Q96M15 143 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 XCL2Q9UBD3 114 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 TRAV12-3A0A0B4J271 114 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 SERTM2A0A1B0GWG4 89 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 ZNF705GA8MUZ8 300 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-212ENST00000523483 BTN1A1Q13410 526 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 SMUG1Q53HV7 270 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 IBA57Q5T440 356 aaKnown RBP6.94□□□□□ -1.3
SDCBP-212ENST00000523483 FOXI2Q6ZQN5 318 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 TUBA4BQ9H853 241 aa6.94□□□□□ -1.3
SDCBP-212ENST00000523483 CARHSP1Q9Y2V2 147 aaKnown RBP6.94□□□□□ -1.3
SDCBP-212ENST00000523483 LTAP01374 205 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 SAPCD1Q5SSQ6 148 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 ISOC2Q96AB3 205 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 MRPL53Q96EL3 112 aaKnown RBP6.93□□□□□ -1.3
SDCBP-212ENST00000523483 LINC00477Q96M19 166 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 TMEM208Q9BTX3 173 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 SAV1Q9H4B6 383 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-212ENST00000523483 ZNF492Q9P255 531 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 KLF12Q9Y4X4 402 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 C9JCJ5 164 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 SPINK4O60575 86 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 RIPPLY3P57055 190 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 H7BYZ3 331 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 P01737 135 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 LINC00322Q6ZN03 302 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms