RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 H2AFB1P0C5Y9 115 aa13.15□□□□□ -0.3
VEGFA-222ENST00000520948 ERCC8Q13216 396 aa13.15□□□□□ -0.3
VEGFA-222ENST00000520948 FAM74A1Q5RGS3 127 aa13.15□□□□□ -0.3
VEGFA-222ENST00000520948 SFT2D1Q8WV19 159 aa13.15□□□□□ -0.3
VEGFA-222ENST00000520948 FAM19A4Q96LR4 140 aa13.15□□□□□ -0.3
VEGFA-222ENST00000520948 ODF3Q96PU9 254 aa13.15□□□□□ -0.3
VEGFA-222ENST00000520948 IGKV2-40A0A087WW87 121 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-222ENST00000520948 TRAV1-1A0A0B4J248 108 aa13.14□□□□□ -0.31
VEGFA-222ENST00000520948 ZNF705EA8MWA4 302 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-222ENST00000520948 BOLA2-SMG1P6H3BVE0 249 aa13.14□□□□□ -0.31
VEGFA-222ENST00000520948 IGKV2D-40P01614 121 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-222ENST00000520948 AMBPP02760 352 aa13.14□□□□□ -0.31
VEGFA-222ENST00000520948 CSN1S1P47710 185 aa13.14□□□□□ -0.31
VEGFA-222ENST00000520948 SUMO1P63165 101 aaKnown RBP13.14□□□□□ -0.31
VEGFA-222ENST00000520948 SPINK13Q1W4C9 94 aa13.14□□□□□ -0.31
VEGFA-222ENST00000520948 VGLL1Q99990 258 aa13.14□□□□□ -0.31
VEGFA-222ENST00000520948 PPP1R14DQ9NXH3 145 aa13.14□□□□□ -0.31
VEGFA-222ENST00000520948 YTHDF2Q9Y5A9 579 aaKnown RBP13.14□□□□□ -0.31
VEGFA-222ENST00000520948 GGTLC3B5MD39 225 aa13.13□□□□□ -0.31
VEGFA-222ENST00000520948 M0R2Z0 102 aa13.13□□□□□ -0.31
VEGFA-222ENST00000520948 PMS2P11Q13670 270 aa13.13□□□□□ -0.31
VEGFA-222ENST00000520948 ZNF705AQ6ZN79 300 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-222ENST00000520948 C1orf158Q8N1D5 194 aa13.13□□□□□ -0.31
VEGFA-222ENST00000520948 LINC00476Q8WZB0 136 aa13.13□□□□□ -0.31
VEGFA-222ENST00000520948 IGF2BP2-AS1Q96M15 143 aa13.13□□□□□ -0.31
VEGFA-222ENST00000520948 RARRES2Q99969 163 aa13.13□□□□□ -0.31
VEGFA-222ENST00000520948 X6R8D5 127 aa13.13□□□□□ -0.31
VEGFA-222ENST00000520948 FAM74A7A6NL05 159 aa13.12□□□□□ -0.31
VEGFA-222ENST00000520948 CDKN1BP46527 198 aa13.12□□□□□ -0.31
VEGFA-222ENST00000520948 IQCF2Q8IXL9 164 aa13.12□□□□□ -0.31
VEGFA-222ENST00000520948 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
VEGFA-222ENST00000520948 OR11H2Q8NH07 326 aa13.12□□□□□ -0.31
VEGFA-222ENST00000520948 ZNF492Q9P255 531 aa13.12□□□□□ -0.31
VEGFA-222ENST00000520948 CXorf65A6NEN9 183 aa13.11□□□□□ -0.31
VEGFA-222ENST00000520948 LY6G6CO95867 125 aa13.11□□□□□ -0.31
VEGFA-222ENST00000520948 KIR3DS1Q14943 382 aa13.11□□□□□ -0.31
VEGFA-222ENST00000520948 ALKAL2Q6UX46 152 aa13.11□□□□□ -0.31
VEGFA-222ENST00000520948 CCDC28AQ8IWP9 274 aa13.11□□□□□ -0.31
VEGFA-222ENST00000520948 CMTM2Q8TAZ6 248 aa13.11□□□□□ -0.31
VEGFA-222ENST00000520948 NKX6-2Q9C056 277 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-222ENST00000520948 EPDR1Q9UM22 224 aa13.11□□□□□ -0.31
VEGFA-222ENST00000520948 ARL2-SNX15V9GYD0 113 aa13.11□□□□□ -0.31
VEGFA-222ENST00000520948 TRBV7-9A0A0J9YWB2 115 aa13.1□□□□□ -0.31
VEGFA-222ENST00000520948 TCRAP04437 139 aa13.1□□□□□ -0.31
VEGFA-222ENST00000520948 CRISP2P16562 243 aa13.1□□□□□ -0.31
VEGFA-222ENST00000520948 TSPOP30536 169 aa13.1□□□□□ -0.31
VEGFA-222ENST00000520948 UBE2G2P60604 165 aa13.1□□□□□ -0.31
VEGFA-222ENST00000520948 GNG5P63218 68 aa13.1□□□□□ -0.31
VEGFA-222ENST00000520948 CCL20P78556 96 aa13.1□□□□□ -0.31
VEGFA-222ENST00000520948 NEU1Q99519 415 aa13.1□□□□□ -0.31
VEGFA-222ENST00000520948 TRAV12-2A0A075B6T6 113 aa13.09□□□□□ -0.31
VEGFA-222ENST00000520948 NMBP08949 121 aa13.09□□□□□ -0.31
VEGFA-222ENST00000520948 RBMY1A1P0DJD3 496 aaKnown RBP13.09□□□□□ -0.31
VEGFA-222ENST00000520948 RBMY1CP0DJD4 496 aa13.09□□□□□ -0.31
VEGFA-222ENST00000520948 ZNF138P52744 262 aa13.09□□□□□ -0.31
VEGFA-222ENST00000520948 RBMY1FQ15415 496 aaKnown RBP13.09□□□□□ -0.31
VEGFA-222ENST00000520948 TMEM78Q5T7P6 136 aa13.09□□□□□ -0.31
VEGFA-222ENST00000520948 GOLT1AQ6ZVE7 132 aa13.09□□□□□ -0.31
VEGFA-222ENST00000520948 A0A0J9YWU9 116 aa13.08□□□□□ -0.32
VEGFA-222ENST00000520948 SERTM2A0A1B0GWG4 89 aa13.08□□□□□ -0.32
VEGFA-222ENST00000520948 KLLNB2CW77 178 aa13.08□□□□□ -0.32
VEGFA-222ENST00000520948 LEPP41159 167 aa13.08□□□□□ -0.32
VEGFA-222ENST00000520948 ZFAND2AQ8N6M9 145 aa13.08□□□□□ -0.32
VEGFA-222ENST00000520948 Q8NAQ8 132 aa13.08□□□□□ -0.32
VEGFA-222ENST00000520948 LENEPQ9Y5L5 61 aa13.08□□□□□ -0.32
VEGFA-222ENST00000520948 A0A1B0GV50 99 aa13.07□□□□□ -0.32
VEGFA-222ENST00000520948 PAGE4O60829 102 aa13.07□□□□□ -0.32
VEGFA-222ENST00000520948 INSP01308 110 aa13.07□□□□□ -0.32
VEGFA-222ENST00000520948 IGLV2-11P01706 119 aa13.07□□□□□ -0.32
VEGFA-222ENST00000520948 MIFP14174 115 aa13.07□□□□□ -0.32
VEGFA-222ENST00000520948 PPT1P50897 306 aa13.07□□□□□ -0.32
VEGFA-222ENST00000520948 C20orf144Q9BQM9 153 aa13.07□□□□□ -0.32
VEGFA-222ENST00000520948 RPH3ALQ9UNE2 315 aa13.07□□□□□ -0.32
VEGFA-222ENST00000520948 GOLT1BQ9Y3E0 138 aa13.07□□□□□ -0.32
VEGFA-222ENST00000520948 SMIM9A6NGZ8 99 aa13.06□□□□□ -0.32
VEGFA-222ENST00000520948 HBE1P02100 147 aa13.06□□□□□ -0.32
VEGFA-222ENST00000520948 GFI1BQ5VTD9 330 aa13.06□□□□□ -0.32
VEGFA-222ENST00000520948 LYPD6BQ8NI32 183 aa13.06□□□□□ -0.32
VEGFA-222ENST00000520948 Q8TAT8 98 aa13.06□□□□□ -0.32
VEGFA-222ENST00000520948 ATG101Q9BSB4 218 aa13.06□□□□□ -0.32
VEGFA-222ENST00000520948 TRAV8-1A0A0A6YYK1 113 aa13.05□□□□□ -0.32
VEGFA-222ENST00000520948 TEX46H3BTG2 121 aa13.05□□□□□ -0.32
VEGFA-222ENST00000520948 ZNF324O75467 553 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-222ENST00000520948 ATP5G3P48201 142 aa13.05□□□□□ -0.32
VEGFA-222ENST00000520948 BLOC1S1P78537 153 aa13.05□□□□□ -0.32
VEGFA-222ENST00000520948 TMEM256Q8N2U0 113 aa13.05□□□□□ -0.32
VEGFA-222ENST00000520948 CYB561D1Q8N8Q1 229 aa13.05□□□□□ -0.32
VEGFA-222ENST00000520948 HIST1H2BAQ96A08 127 aa13.05□□□□□ -0.32
VEGFA-222ENST00000520948 TVP23CQ96ET8 276 aa13.05□□□□□ -0.32
VEGFA-222ENST00000520948 C11orf68Q9H3H3 251 aaKnown RBP13.05□□□□□ -0.32
VEGFA-222ENST00000520948 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
VEGFA-222ENST00000520948 IGHV4-28A0A0C4DH34 117 aa13.04□□□□□ -0.32
VEGFA-222ENST00000520948 NUPR2A6NF83 97 aa13.04□□□□□ -0.32
VEGFA-222ENST00000520948 IFNA7P01567 189 aa13.04□□□□□ -0.32
VEGFA-222ENST00000520948 PRR9Q5T870 116 aa13.04□□□□□ -0.32
VEGFA-222ENST00000520948 CST9LP1Q5W188 147 aa13.04□□□□□ -0.32
VEGFA-222ENST00000520948 TMEM75Q8N9X5 138 aa13.04□□□□□ -0.32
VEGFA-222ENST00000520948 TCEAL7Q9BRU2 100 aa13.04□□□□□ -0.32
VEGFA-222ENST00000520948 FRAS1Q86XX4 4008 aa13.04□□□□□ -0.32
VEGFA-222ENST00000520948 C7orf71A4D174 169 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 189.9 ms