RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 AGPAT4-IT1Q9H0P7 198 aa13.22□□□□□ -0.29
SREK1-207ENST00000520058 SH3BGRL3Q9H299 93 aa13.22□□□□□ -0.29
SREK1-207ENST00000520058 KANTRA0A1W2PQU2 76 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 PGPA6NDG6 321 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 SMLR1H3BR10 107 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 HMGB3O15347 200 aaKnown RBP13.21□□□□□ -0.29
SREK1-207ENST00000520058 NMBP08949 121 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 ARL14EPLP0DKL9 152 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 EIF5AP63241 154 aaKnown RBP13.21□□□□□ -0.29
SREK1-207ENST00000520058 ERCC8Q13216 396 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 FAM222AQ5U5X8 452 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 GFI1BQ5VTD9 330 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 Q6ZTC4 211 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 ARL6IP6Q8N6S5 226 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 TMEM167BQ9NRX6 74 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 DKK2Q9UBU2 259 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 CELA1Q9UNI1 258 aa13.21□□□□□ -0.29
SREK1-207ENST00000520058 IGKV2-40A0A087WW87 121 aaPredicted RBP13.2□□□□□ -0.3
SREK1-207ENST00000520058 LYRM9A8MSI8 78 aa13.2□□□□□ -0.3
SREK1-207ENST00000520058 IGKV2D-40P01614 121 aaPredicted RBP13.2□□□□□ -0.3
SREK1-207ENST00000520058 C12orf74Q32Q52 190 aa13.2□□□□□ -0.3
SREK1-207ENST00000520058 KCNRGQ8N5I3 272 aa13.2□□□□□ -0.3
SREK1-207ENST00000520058 HYLS1Q96M11 299 aa13.2□□□□□ -0.3
SREK1-207ENST00000520058 DEFB131BA0A096LNP1 70 aa13.19□□□□□ -0.3
SREK1-207ENST00000520058 TRAV12-3A0A0B4J271 114 aa13.19□□□□□ -0.3
SREK1-207ENST00000520058 TRBV7-9A0A0J9YWB2 115 aa13.19□□□□□ -0.3
SREK1-207ENST00000520058 C7orf71A4D174 169 aa13.19□□□□□ -0.3
SREK1-207ENST00000520058 IGLL5B9A064 214 aa13.19□□□□□ -0.3
SREK1-207ENST00000520058 ZNF138P52744 262 aa13.19□□□□□ -0.3
SREK1-207ENST00000520058 DAD1P61803 113 aa13.19□□□□□ -0.3
SREK1-207ENST00000520058 IQCF2Q8IXL9 164 aa13.19□□□□□ -0.3
SREK1-207ENST00000520058 TMEM263Q8WUH6 116 aaKnown RBP13.19□□□□□ -0.3
SREK1-207ENST00000520058 PYGO2Q9BRQ0 406 aa13.19□□□□□ -0.3
SREK1-207ENST00000520058 ZNF492Q9P255 531 aa13.19□□□□□ -0.3
SREK1-207ENST00000520058 CTXND1A0A1B0GTU2 59 aa13.18□□□□□ -0.3
SREK1-207ENST00000520058 DIRC3C9JPN6 131 aa13.18□□□□□ -0.3
SREK1-207ENST00000520058 K7EQM0 130 aa13.18□□□□□ -0.3
SREK1-207ENST00000520058 PFDN1O60925 122 aa13.18□□□□□ -0.3
SREK1-207ENST00000520058 EIF3GO75821 320 aaKnown RBP eCLIP13.18□□□□□ -0.3
SREK1-207ENST00000520058 GCHFRP30047 84 aa13.18□□□□□ -0.3
SREK1-207ENST00000520058 ZNF767PQ75MW2 155 aa13.18□□□□□ -0.3
SREK1-207ENST00000520058 VGLL1Q99990 258 aa13.18□□□□□ -0.3
SREK1-207ENST00000520058 TIMM8BQ9Y5J9 83 aaPredicted RBP13.18□□□□□ -0.3
SREK1-207ENST00000520058 SERTM2A0A1B0GWG4 89 aa13.17□□□□□ -0.3
SREK1-207ENST00000520058 KLLNB2CW77 178 aa13.17□□□□□ -0.3
SREK1-207ENST00000520058 CRISP2P16562 243 aa13.17□□□□□ -0.3
SREK1-207ENST00000520058 RNASE4P34096 147 aaKnown RBP13.17□□□□□ -0.3
SREK1-207ENST00000520058 RPH3ALQ9UNE2 315 aa13.17□□□□□ -0.3
SREK1-207ENST00000520058 LENEPQ9Y5L5 61 aa13.17□□□□□ -0.3
SREK1-207ENST00000520058 STARD9Q9P2P6 4700 aa13.16□□□□□ -0.3
SREK1-207ENST00000520058 SNURFLB1AK76 121 aa13.16□□□□□ -0.3
SREK1-207ENST00000520058 STOML3Q8TAV4 291 aa13.16□□□□□ -0.3
SREK1-207ENST00000520058 TMED6Q8WW62 240 aa13.16□□□□□ -0.3
SREK1-207ENST00000520058 ST6GAL2Q96JF0 529 aa13.16□□□□□ -0.3
SREK1-207ENST00000520058 FAM19A4Q96LR4 140 aa13.16□□□□□ -0.3
SREK1-207ENST00000520058 ZNF471Q9BX82 626 aaPredicted RBP13.16□□□□□ -0.3
SREK1-207ENST00000520058 CYTL1Q9NRR1 136 aa13.16□□□□□ -0.3
SREK1-207ENST00000520058 BCL2L11O43521 198 aa13.15□□□□□ -0.3
SREK1-207ENST00000520058 LY6G6CO95867 125 aa13.15□□□□□ -0.3
SREK1-207ENST00000520058 AZU1P20160 251 aa13.15□□□□□ -0.3
SREK1-207ENST00000520058 KIR3DS1Q14943 382 aa13.15□□□□□ -0.3
SREK1-207ENST00000520058 C5orf17Q8NAS9 161 aa13.15□□□□□ -0.3
SREK1-207ENST00000520058 ZNF680Q8NEM1 530 aa13.15□□□□□ -0.3
SREK1-207ENST00000520058 UMAD1C9J7I0 102 aa13.14□□□□□ -0.31
SREK1-207ENST00000520058 RGS13O14921 159 aa13.14□□□□□ -0.31
SREK1-207ENST00000520058 SEC11BP0C7V7 166 aa13.14□□□□□ -0.31
SREK1-207ENST00000520058 Q6ZNX1 250 aa13.14□□□□□ -0.31
SREK1-207ENST00000520058 OR11H4Q8NGC9 324 aa13.14□□□□□ -0.31
SREK1-207ENST00000520058 RNASE8Q8TDE3 154 aaKnown RBP13.14□□□□□ -0.31
SREK1-207ENST00000520058 LINC00476Q8WZB0 136 aa13.14□□□□□ -0.31
SREK1-207ENST00000520058 FAM210BQ96KR6 192 aa13.14□□□□□ -0.31
SREK1-207ENST00000520058 NDFIP1Q9BT67 221 aa13.14□□□□□ -0.31
SREK1-207ENST00000520058 NDUFAF3Q9BU61 184 aa13.14□□□□□ -0.31
SREK1-207ENST00000520058 NKX6-2Q9C056 277 aaPredicted RBP13.14□□□□□ -0.31
SREK1-207ENST00000520058 KMT2CQ8NEZ4 4911 aaKnown RBP13.14□□□□□ -0.31
SREK1-207ENST00000520058 A0A1W2PRE2 83 aa13.13□□□□□ -0.31
SREK1-207ENST00000520058 PRM2P04554 102 aa13.13□□□□□ -0.31
SREK1-207ENST00000520058 DEFB130BP0DP73 79 aa13.13□□□□□ -0.31
SREK1-207ENST00000520058 DEFB130AP0DP74 79 aa13.13□□□□□ -0.31
SREK1-207ENST00000520058 HTN3P15516 51 aa13.13□□□□□ -0.31
SREK1-207ENST00000520058 CD300CQ08708 224 aa13.13□□□□□ -0.31
SREK1-207ENST00000520058 BTN1A1Q13410 526 aa13.13□□□□□ -0.31
SREK1-207ENST00000520058 GOLT1AQ6ZVE7 132 aa13.13□□□□□ -0.31
SREK1-207ENST00000520058 TCTE3Q8IZS6 198 aa13.13□□□□□ -0.31
SREK1-207ENST00000520058 EIF4E3Q8N5X7 224 aaKnown RBP13.13□□□□□ -0.31
SREK1-207ENST00000520058 Q8TAT8 98 aa13.13□□□□□ -0.31
SREK1-207ENST00000520058 SUN5Q8TC36 379 aa13.13□□□□□ -0.31
SREK1-207ENST00000520058 IGHV4-4A0A075B6R2 117 aa13.12□□□□□ -0.31
SREK1-207ENST00000520058 FBLL1A6NHQ2 334 aaKnown RBP13.12□□□□□ -0.31
SREK1-207ENST00000520058 CBY3A6NI87 242 aa13.12□□□□□ -0.31
SREK1-207ENST00000520058 TPT1P13693 172 aaKnown RBP13.12□□□□□ -0.31
SREK1-207ENST00000520058 LGALS9CQ6DKI2 356 aa13.12□□□□□ -0.31
SREK1-207ENST00000520058 TMUB2Q71RG4 321 aa13.12□□□□□ -0.31
SREK1-207ENST00000520058 LINC00467Q9BRT7 94 aa13.12□□□□□ -0.31
SREK1-207ENST00000520058 MAP1LC3B2A6NCE7 125 aa13.11□□□□□ -0.31
SREK1-207ENST00000520058 ZNF324O75467 553 aaPredicted RBP13.11□□□□□ -0.31
SREK1-207ENST00000520058 SUMO1P63165 101 aaKnown RBP13.11□□□□□ -0.31
SREK1-207ENST00000520058 EIF5AL1Q6IS14 154 aaKnown RBP13.11□□□□□ -0.31
SREK1-207ENST00000520058 ZFAND2AQ8N6M9 145 aa13.11□□□□□ -0.31
SREK1-207ENST00000520058 MAP1LC3BQ9GZQ8 125 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms