RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 FAM231CP0DMU5 169 aa17.42■□□□□ 0.38
PVT1-204ENST00000517525 ERCC8Q13216 396 aa17.42■□□□□ 0.38
PVT1-204ENST00000517525 OR2G3Q8NGZ4 309 aa17.42■□□□□ 0.38
PVT1-204ENST00000517525 PHYHIPLQ96FC7 376 aa17.42■□□□□ 0.38
PVT1-204ENST00000517525 DNAH6Q9C0G6 4158 aa17.41■□□□□ 0.38
PVT1-204ENST00000517525 RBAKDNA6NC62 111 aa17.41■□□□□ 0.38
PVT1-204ENST00000517525 Q5BKY6 102 aa17.41■□□□□ 0.38
PVT1-204ENST00000517525 CCDC28AQ8IWP9 274 aa17.41■□□□□ 0.38
PVT1-204ENST00000517525 CBY3A6NI87 242 aa17.4■□□□□ 0.38
PVT1-204ENST00000517525 UBE2L3P68036 154 aaKnown RBP17.4■□□□□ 0.38
PVT1-204ENST00000517525 FAM122CQ6P4D5 195 aa17.4■□□□□ 0.38
PVT1-204ENST00000517525 PQLC2Q6ZP29 291 aa17.4■□□□□ 0.38
PVT1-204ENST00000517525 LINC00612Q8N6U2 182 aa17.4■□□□□ 0.38
PVT1-204ENST00000517525 PSMG3Q9BT73 122 aaPredicted RBP17.4■□□□□ 0.38
PVT1-204ENST00000517525 ZNF492Q9P255 531 aa17.4■□□□□ 0.38
PVT1-204ENST00000517525 TRAV12-3A0A0B4J271 114 aa17.39■□□□□ 0.37
PVT1-204ENST00000517525 C7orf71A4D174 169 aa17.39■□□□□ 0.37
PVT1-204ENST00000517525 ZNF324O75467 553 aaPredicted RBP17.39■□□□□ 0.37
PVT1-204ENST00000517525 HTN1P15515 57 aa17.39■□□□□ 0.37
PVT1-204ENST00000517525 TMEM78Q5T7P6 136 aa17.39■□□□□ 0.37
PVT1-204ENST00000517525 ARL6IP6Q8N6S5 226 aa17.39■□□□□ 0.37
PVT1-204ENST00000517525 IGKV2-40A0A087WW87 121 aaPredicted RBP17.38■□□□□ 0.37
PVT1-204ENST00000517525 IGKV2D-40P01614 121 aaPredicted RBP17.38■□□□□ 0.37
PVT1-204ENST00000517525 DEFB130BP0DP73 79 aa17.38■□□□□ 0.37
PVT1-204ENST00000517525 DEFB130AP0DP74 79 aa17.38■□□□□ 0.37
PVT1-204ENST00000517525 CSN1S1P47710 185 aa17.38■□□□□ 0.37
PVT1-204ENST00000517525 RANP62826 216 aaKnown RBP17.38■□□□□ 0.37
PVT1-204ENST00000517525 ZFAND2AQ8N6M9 145 aa17.38■□□□□ 0.37
PVT1-204ENST00000517525 POM121L12Q8N7R1 296 aa17.38■□□□□ 0.37
PVT1-204ENST00000517525 VGLL1Q99990 258 aa17.38■□□□□ 0.37
PVT1-204ENST00000517525 Q9H3A6 140 aa17.38■□□□□ 0.37
PVT1-204ENST00000517525 A0A1W2PPV4 95 aa17.37■□□□□ 0.37
PVT1-204ENST00000517525 SERF2P84101 59 aa17.37■□□□□ 0.37
PVT1-204ENST00000517525 RXFP4Q8TDU9 374 aa17.37■□□□□ 0.37
PVT1-204ENST00000517525 NOP10Q9NPE3 64 aaKnown RBP17.37■□□□□ 0.37
PVT1-204ENST00000517525 ATP5G1P05496 136 aa17.36■□□□□ 0.37
PVT1-204ENST00000517525 HTN3P15516 51 aa17.36■□□□□ 0.37
PVT1-204ENST00000517525 ATP5G3P48201 142 aa17.36■□□□□ 0.37
PVT1-204ENST00000517525 ZNF138P52744 262 aa17.36■□□□□ 0.37
PVT1-204ENST00000517525 RAB2AP61019 212 aa17.36■□□□□ 0.37
PVT1-204ENST00000517525 DAZ2Q13117 558 aaKnown RBP17.36■□□□□ 0.37
PVT1-204ENST00000517525 TMEM88Q6PEY1 159 aa17.36■□□□□ 0.37
PVT1-204ENST00000517525 C15orf53Q8NAA6 179 aa17.36■□□□□ 0.37
PVT1-204ENST00000517525 INO80EQ8NBZ0 244 aaPredicted RBP17.36■□□□□ 0.37
PVT1-204ENST00000517525 OR10G4Q8NGN3 311 aa17.36■□□□□ 0.37
PVT1-204ENST00000517525 OR10G9Q8NGN4 311 aa17.36■□□□□ 0.37
PVT1-204ENST00000517525 OR10G7Q8NGN6 311 aa17.36■□□□□ 0.37
PVT1-204ENST00000517525 J3KRW8 73 aa17.35■□□□□ 0.37
PVT1-204ENST00000517525 CD300CQ08708 224 aa17.35■□□□□ 0.37
PVT1-204ENST00000517525 ANXA2RQ3ZCQ2 193 aa17.35■□□□□ 0.37
PVT1-204ENST00000517525 TMED6Q8WW62 240 aa17.35■□□□□ 0.37
PVT1-204ENST00000517525 OTORQ9NRC9 128 aa17.35■□□□□ 0.37
PVT1-204ENST00000517525 TNFSF18Q9UNG2 199 aa17.35■□□□□ 0.37
PVT1-204ENST00000517525 LENEPQ9Y5L5 61 aa17.35■□□□□ 0.37
PVT1-204ENST00000517525 RNF222A6NCQ9 220 aa17.34■□□□□ 0.37
PVT1-204ENST00000517525 MBP02144 154 aa17.34■□□□□ 0.37
PVT1-204ENST00000517525 GPX1P07203 203 aa17.34■□□□□ 0.37
PVT1-204ENST00000517525 ATP6V0CP27449 155 aa17.34■□□□□ 0.37
PVT1-204ENST00000517525 RNF212Q495C1 297 aa17.34■□□□□ 0.37
PVT1-204ENST00000517525 HSD17B11Q8NBQ5 300 aa17.34■□□□□ 0.37
PVT1-204ENST00000517525 ZNF680Q8NEM1 530 aa17.34■□□□□ 0.37
PVT1-204ENST00000517525 OR2T35Q8NGX2 323 aa17.34■□□□□ 0.37
PVT1-204ENST00000517525 DIRC3C9JPN6 131 aa17.33■□□□□ 0.36
PVT1-204ENST00000517525 BTN1A1Q13410 526 aa17.33■□□□□ 0.36
PVT1-204ENST00000517525 SUN5Q8TC36 379 aa17.33■□□□□ 0.36
PVT1-204ENST00000517525 SNURFLB1AK76 121 aa17.32■□□□□ 0.36
PVT1-204ENST00000517525 G3V3Q6 166 aa17.32■□□□□ 0.36
PVT1-204ENST00000517525 STAG3L2P0CL84 134 aa17.32■□□□□ 0.36
PVT1-204ENST00000517525 STAG3L3P0CL85 134 aa17.32■□□□□ 0.36
PVT1-204ENST00000517525 RNASE4P34096 147 aaKnown RBP17.32■□□□□ 0.36
PVT1-204ENST00000517525 EIF4E3Q8N5X7 224 aaKnown RBP17.32■□□□□ 0.36
PVT1-204ENST00000517525 C11orf72Q8NBR9 251 aa17.32■□□□□ 0.36
PVT1-204ENST00000517525 CDC34P49427 236 aaPredicted RBP17.31■□□□□ 0.36
PVT1-204ENST00000517525 FAM74A1Q5RGS3 127 aa17.31■□□□□ 0.36
PVT1-204ENST00000517525 GNPNAT1Q96EK6 184 aaPredicted RBP17.31■□□□□ 0.36
PVT1-204ENST00000517525 C18orf15Q96N68 181 aa17.31■□□□□ 0.36
PVT1-204ENST00000517525 F5H768 121 aa17.3■□□□□ 0.36
PVT1-204ENST00000517525 PRR9Q5T870 116 aa17.3■□□□□ 0.36
PVT1-204ENST00000517525 FXYD6-FXYD2A0A087WZ82 144 aa17.29■□□□□ 0.36
PVT1-204ENST00000517525 PGPA6NDG6 321 aa17.29■□□□□ 0.36
PVT1-204ENST00000517525 EIF3GO75821 320 aaKnown RBP eCLIP17.29■□□□□ 0.36
PVT1-204ENST00000517525 IBA57Q5T440 356 aaKnown RBP17.29■□□□□ 0.36
PVT1-204ENST00000517525 RAB24Q969Q5 203 aa17.29■□□□□ 0.36
PVT1-204ENST00000517525 DNAH10Q8IVF4 4471 aa17.29■□□□□ 0.36
PVT1-204ENST00000517525 BORCS7-ASMTA0A0B4J1R7 106 aa17.28■□□□□ 0.36
PVT1-204ENST00000517525 FAM3BP58499 235 aaPredicted RBP17.28■□□□□ 0.36
PVT1-204ENST00000517525 CMTM2Q8TAZ6 248 aa17.28■□□□□ 0.36
PVT1-204ENST00000517525 IGHV1OR15-1A0A075B7D0 117 aa17.27■□□□□ 0.36
PVT1-204ENST00000517525 ARL14EPLP0DKL9 152 aa17.27■□□□□ 0.36
PVT1-204ENST00000517525 RPL7L1Q6DKI1 246 aaKnown RBP17.27■□□□□ 0.36
PVT1-204ENST00000517525 Q8TAT8 98 aa17.27■□□□□ 0.36
PVT1-204ENST00000517525 ST6GAL2Q96JF0 529 aa17.27■□□□□ 0.36
PVT1-204ENST00000517525 TAAR5O14804 337 aa17.26■□□□□ 0.35
PVT1-204ENST00000517525 TCL1AP56279 114 aa17.26■□□□□ 0.35
PVT1-204ENST00000517525 Q6AWC8 147 aa17.26■□□□□ 0.35
PVT1-204ENST00000517525 SH3BGRL3Q9H299 93 aa17.26■□□□□ 0.35
PVT1-204ENST00000517525 GSN-AS1Q9NRJ2 163 aa17.26■□□□□ 0.35
PVT1-204ENST00000517525 RGS13O14921 159 aa17.25■□□□□ 0.35
PVT1-204ENST00000517525 HMGB3O15347 200 aaKnown RBP17.25■□□□□ 0.35
PVT1-204ENST00000517525 LGALS9BQ3B8N2 356 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms