RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 PARP14Q460N5 1801 aa4.06□□□□□ -1.76
CHD1-208ENST00000512392 TRAV3A0A0B4J244 114 aa4.06□□□□□ -1.76
CHD1-208ENST00000512392 SFT2D2O95562 160 aa4.06□□□□□ -1.76
CHD1-208ENST00000512392 Q8N8P6 123 aa4.06□□□□□ -1.76
CHD1-208ENST00000512392 ATP6V0E2Q8NHE4 81 aa4.06□□□□□ -1.76
CHD1-208ENST00000512392 LINC00479Q96M42 142 aa4.06□□□□□ -1.76
CHD1-208ENST00000512392 S100A13Q99584 98 aa4.06□□□□□ -1.76
CHD1-208ENST00000512392 SLC50A1Q9BRV3 221 aa4.06□□□□□ -1.76
CHD1-208ENST00000512392 ADGRL1O94910 1474 aa4.06□□□□□ -1.76
CHD1-208ENST00000512392 MCM3APO60318 1980 aa4.06□□□□□ -1.76
CHD1-208ENST00000512392 CYB5AP00167 134 aa4.05□□□□□ -1.76
CHD1-208ENST00000512392 MSMBP08118 114 aa4.05□□□□□ -1.76
CHD1-208ENST00000512392 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.05□□□□□ -1.76
CHD1-208ENST00000512392 MYO10Q9HD67 2058 aa4.05□□□□□ -1.76
CHD1-208ENST00000512392 PXDNLA1KZ92 1463 aa4.05□□□□□ -1.76
CHD1-208ENST00000512392 CHD3Q12873 2000 aaKnown RBP4.05□□□□□ -1.76
CHD1-208ENST00000512392 E7EQL1 145 aa4.05□□□□□ -1.76
CHD1-208ENST00000512392 DNAH10OSP0CZ25 163 aa4.05□□□□□ -1.76
CHD1-208ENST00000512392 GFI1BQ5VTD9 330 aa4.05□□□□□ -1.76
CHD1-208ENST00000512392 FAM19A2Q8N3H0 131 aa4.05□□□□□ -1.76
CHD1-208ENST00000512392 PMCHL2Q9BQD1 86 aa4.05□□□□□ -1.76
CHD1-208ENST00000512392 UQCR10Q9UDW1 63 aa4.05□□□□□ -1.76
CHD1-208ENST00000512392 GAPVD1Q14C86 1478 aa4.05□□□□□ -1.76
CHD1-208ENST00000512392 KIF26BQ2KJY2 2108 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 ZFC3H1O60293 1989 aaKnown RBP4.04□□□□□ -1.76
CHD1-208ENST00000512392 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 CREBL2O60519 120 aaPredicted RBP4.04□□□□□ -1.76
CHD1-208ENST00000512392 PROSCO94903 275 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 ROMO1P60602 79 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 RPL36AP83881 106 aaKnown RBP4.04□□□□□ -1.76
CHD1-208ENST00000512392 FAM27BQ5VT28 67 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 SPTSSAQ969W0 71 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 CST11Q9H112 138 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 SMCO4Q9NRQ5 59 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 TRAPPC1Q9Y5R8 145 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 BRWD3Q6RI45 1802 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 FANCAO15360 1455 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 SCAF11Q99590 1463 aaKnown RBP4.04□□□□□ -1.76
CHD1-208ENST00000512392 C10orf71Q711Q0 1435 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 LTBP1Q14766 1721 aa4.04□□□□□ -1.76
CHD1-208ENST00000512392 IGHV1-24A0A0C4DH33 117 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 LOC107984156A0A0G2JMH3 177 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 H3BQ85 93 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 YPEL1O60688 119 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 S100A7L2Q5SY68 101 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 ARL17AQ8IVW1 177 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 VSTM2AQ8TAG5 236 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 SCAPERQ9BY12 1400 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 TANC2Q9HCD6 1990 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 J3QLW9 94 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 CBLN1P23435 193 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 RBM3P98179 157 aaKnown RBP4.03□□□□□ -1.76
CHD1-208ENST00000512392 DYNAPQ8N1N2 210 aa4.03□□□□□ -1.76
CHD1-208ENST00000512392 TNRC6AQ8NDV7 1962 aaKnown RBP4.03□□□□□ -1.76
CHD1-208ENST00000512392 DIP2BQ9P265 1576 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 MYO9BQ13459 2157 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 TRAV7A0A075B6U4 112 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 hADV29S1A0JD25 119 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 F8W1H4 67 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 SSSCA1O60232 199 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 NUPR1O60356 82 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 PIRTP0C851 137 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 C1orf134Q5TEV5 83 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 TMEM105Q8N8V8 129 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 UBE2L5PA0A1B0GUS4 154 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 PANO1I0J062 215 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 HINT1P49773 126 aaPredicted RBP4.02□□□□□ -1.77
CHD1-208ENST00000512392 UBE2L3P68036 154 aaKnown RBP4.02□□□□□ -1.77
CHD1-208ENST00000512392 ESRGQ1W209 222 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 Q6ZQT0 140 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 SPANXA2-OT1Q8N9U9 137 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 RNF5Q99942 180 aa4.02□□□□□ -1.77
CHD1-208ENST00000512392 MON2Q7Z3U7 1717 aa4.01□□□□□ -1.77
CHD1-208ENST00000512392 A0A096LNJ9 63 aa4.01□□□□□ -1.77
CHD1-208ENST00000512392 S100A16Q96FQ6 103 aaKnown RBP4.01□□□□□ -1.77
CHD1-208ENST00000512392 AMELYQ99218 206 aa4.01□□□□□ -1.77
CHD1-208ENST00000512392 LY96Q9Y6Y9 160 aa4.01□□□□□ -1.77
CHD1-208ENST00000512392 WDR90Q96KV7 1748 aa4.01□□□□□ -1.77
CHD1-208ENST00000512392 RIC1Q4ADV7 1423 aa4□□□□□ -1.77
CHD1-208ENST00000512392 CD24P25063 80 aa4□□□□□ -1.77
CHD1-208ENST00000512392 ASIPP42127 132 aa4□□□□□ -1.77
CHD1-208ENST00000512392 IGLV3-21P80748 117 aaPredicted RBP4□□□□□ -1.77
CHD1-208ENST00000512392 EIF4EBP1Q13541 118 aaPredicted RBP4□□□□□ -1.77
CHD1-208ENST00000512392 DEFB116Q30KQ4 102 aa4□□□□□ -1.77
CHD1-208ENST00000512392 PTPRBP23467 1997 aa4□□□□□ -1.77
CHD1-208ENST00000512392 MARF1Q9Y4F3 1742 aaKnown RBP4□□□□□ -1.77
CHD1-208ENST00000512392 DAPK1P53355 1430 aa4□□□□□ -1.77
CHD1-208ENST00000512392 IGKV1D-42A0A075B6H8 117 aa4□□□□□ -1.77
CHD1-208ENST00000512392 TMEM235A6NFC5 223 aa4□□□□□ -1.77
CHD1-208ENST00000512392 ZNF705FA8MVS1 300 aaPredicted RBP4□□□□□ -1.77
CHD1-208ENST00000512392 CRPP02741 224 aa4□□□□□ -1.77
CHD1-208ENST00000512392 PRB4P10163 310 aaPredicted RBP4□□□□□ -1.77
CHD1-208ENST00000512392 SSR2P43308 183 aa4□□□□□ -1.77
CHD1-208ENST00000512392 ZNF117Q03924 483 aa4□□□□□ -1.77
CHD1-208ENST00000512392 LINC00299Q6ZSB3 139 aa4□□□□□ -1.77
CHD1-208ENST00000512392 C5orf38Q86SI9 138 aa4□□□□□ -1.77
CHD1-208ENST00000512392 CYB561D1Q8N8Q1 229 aa4□□□□□ -1.77
CHD1-208ENST00000512392 TIMM9Q9Y5J7 89 aa4□□□□□ -1.77
CHD1-208ENST00000512392 NLRP1Q9C000 1473 aa4□□□□□ -1.77
CHD1-208ENST00000512392 ZC3H13Q5T200 1668 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms