RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 TAS2R45P59539 299 aa8.21□□□□□ -1.09
SH3RF1-205ENST00000511421 RAB2AP61019 212 aa8.21□□□□□ -1.09
SH3RF1-205ENST00000511421 ACOT6Q3I5F7 207 aaPredicted RBP8.21□□□□□ -1.09
SH3RF1-205ENST00000511421 KHDC3LQ587J8 217 aa8.21□□□□□ -1.09
SH3RF1-205ENST00000511421 TMEM263Q8WUH6 116 aaKnown RBP8.21□□□□□ -1.09
SH3RF1-205ENST00000511421 VGLL1Q99990 258 aa8.21□□□□□ -1.09
SH3RF1-205ENST00000511421 BIRC6Q9NR09 4857 aa8.21□□□□□ -1.09
SH3RF1-205ENST00000511421 SLC25A5P05141 298 aaKnown RBP8.21□□□□□ -1.1
SH3RF1-205ENST00000511421 DEFB130BP0DP73 79 aa8.21□□□□□ -1.1
SH3RF1-205ENST00000511421 DEFB130AP0DP74 79 aa8.21□□□□□ -1.1
SH3RF1-205ENST00000511421 CRISP2P16562 243 aa8.21□□□□□ -1.1
SH3RF1-205ENST00000511421 RANP62826 216 aaKnown RBP8.21□□□□□ -1.1
SH3RF1-205ENST00000511421 UBE2L3P68036 154 aaKnown RBP8.21□□□□□ -1.1
SH3RF1-205ENST00000511421 ZNF266Q14584 549 aa8.21□□□□□ -1.1
SH3RF1-205ENST00000511421 LYPD1Q8N2G4 141 aa8.21□□□□□ -1.1
SH3RF1-205ENST00000511421 Q9H3A6 140 aa8.21□□□□□ -1.1
SH3RF1-205ENST00000511421 TIMM8BQ9Y5J9 83 aaPredicted RBP8.21□□□□□ -1.1
SH3RF1-205ENST00000511421 C7orf71A4D174 169 aa8.2□□□□□ -1.1
SH3RF1-205ENST00000511421 RNF222A6NCQ9 220 aa8.2□□□□□ -1.1
SH3RF1-205ENST00000511421 ZNF324O75467 553 aaPredicted RBP8.2□□□□□ -1.1
SH3RF1-205ENST00000511421 CD300CQ08708 224 aa8.2□□□□□ -1.1
SH3RF1-205ENST00000511421 ZFAND2AQ8N6M9 145 aa8.2□□□□□ -1.1
SH3RF1-205ENST00000511421 HSD17B11Q8NBQ5 300 aa8.2□□□□□ -1.1
SH3RF1-205ENST00000511421 OR2G3Q8NGZ4 309 aa8.2□□□□□ -1.1
SH3RF1-205ENST00000511421 NOP10Q9NPE3 64 aaKnown RBP8.2□□□□□ -1.1
SH3RF1-205ENST00000511421 ZNF492Q9P255 531 aa8.2□□□□□ -1.1
SH3RF1-205ENST00000511421 G3V3Q6 166 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 NMBP08949 121 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 ATP6V0CP27449 155 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 BTN1A1Q13410 526 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 TMEM78Q5T7P6 136 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 TMEM88Q6PEY1 159 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 CCDC28AQ8IWP9 274 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 OR10G4Q8NGN3 311 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 OR10G9Q8NGN4 311 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 OR10G7Q8NGN6 311 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 OR2T35Q8NGX2 323 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 PYGO2Q9BRQ0 406 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 TNFSF18Q9UNG2 199 aa8.19□□□□□ -1.1
SH3RF1-205ENST00000511421 A0A1W2PPV4 95 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 RBAKDNA6NC62 111 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 CBY3A6NI87 242 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 P0DMU3 169 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 FAM231AP0DMU4 169 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 FAM231CP0DMU5 169 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 RNASE4P34096 147 aaKnown RBP8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 PRR9Q5T870 116 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 PQLC2Q6ZP29 291 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 LINC00612Q8N6U2 182 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 LINC00467Q9BRT7 94 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 PSMG3Q9BT73 122 aaPredicted RBP8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 FRAS1Q86XX4 4008 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 FXYD6-FXYD2A0A087WZ82 144 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 TRBV7-9A0A0J9YWB2 115 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 DIRC3C9JPN6 131 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 HMGB3O15347 200 aaKnown RBP8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 GPX1P07203 203 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 CSN1S1P47710 185 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 ZNF138P52744 262 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 POM121L12Q8N7R1 296 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 INO80EQ8NBZ0 244 aaPredicted RBP8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 OTORQ9NRC9 128 aa8.18□□□□□ -1.1
SH3RF1-205ENST00000511421 PGPA6NDG6 321 aa8.17□□□□□ -1.1
SH3RF1-205ENST00000511421 ATP5G1P05496 136 aa8.17□□□□□ -1.1
SH3RF1-205ENST00000511421 STAG3L2P0CL84 134 aa8.17□□□□□ -1.1
SH3RF1-205ENST00000511421 STAG3L3P0CL85 134 aa8.17□□□□□ -1.1
SH3RF1-205ENST00000511421 ATP5G3P48201 142 aa8.17□□□□□ -1.1
SH3RF1-205ENST00000511421 SERF2P84101 59 aa8.17□□□□□ -1.1
SH3RF1-205ENST00000511421 RPL7L1Q6DKI1 246 aaKnown RBP8.17□□□□□ -1.1
SH3RF1-205ENST00000511421 Q6ZQT7 251 aa8.17□□□□□ -1.1
SH3RF1-205ENST00000511421 Q8TAT8 98 aa8.17□□□□□ -1.1
SH3RF1-205ENST00000511421 RXFP4Q8TDU9 374 aa8.17□□□□□ -1.1
SH3RF1-205ENST00000511421 SH3BGRL3Q9H299 93 aa8.17□□□□□ -1.1
SH3RF1-205ENST00000511421 F5H768 121 aa8.16□□□□□ -1.1
SH3RF1-205ENST00000511421 ARL14EPLP0DKL9 152 aa8.16□□□□□ -1.1
SH3RF1-205ENST00000511421 CDC34P49427 236 aaPredicted RBP8.16□□□□□ -1.1
SH3RF1-205ENST00000511421 DAZ2Q13117 558 aaKnown RBP8.16□□□□□ -1.1
SH3RF1-205ENST00000511421 ANXA2RQ3ZCQ2 193 aa8.16□□□□□ -1.1
SH3RF1-205ENST00000511421 EIF4E3Q8N5X7 224 aaKnown RBP8.16□□□□□ -1.1
SH3RF1-205ENST00000511421 C11orf72Q8NBR9 251 aa8.16□□□□□ -1.1
SH3RF1-205ENST00000511421 RAB24Q969Q5 203 aa8.16□□□□□ -1.1
SH3RF1-205ENST00000511421 HYLS1Q96M11 299 aa8.16□□□□□ -1.1
SH3RF1-205ENST00000511421 SNURFLB1AK76 121 aa8.15□□□□□ -1.1
SH3RF1-205ENST00000511421 MBP02144 154 aa8.15□□□□□ -1.1
SH3RF1-205ENST00000511421 ARL6IP6Q8N6S5 226 aa8.15□□□□□ -1.1
SH3RF1-205ENST00000511421 C15orf53Q8NAA6 179 aa8.15□□□□□ -1.1
SH3RF1-205ENST00000511421 SUN5Q8TC36 379 aa8.15□□□□□ -1.1
SH3RF1-205ENST00000511421 GSN-AS1Q9NRJ2 163 aa8.15□□□□□ -1.1
SH3RF1-205ENST00000511421 GAGE12BA1L429 117 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 GAGE7O76087 117 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 GAGE12FP0CL80 117 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 GAGE12GP0CL81 117 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 GAGE12IP0CL82 117 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 ZNF680Q8NEM1 530 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 TMED6Q8WW62 240 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 GNPNAT1Q96EK6 184 aaPredicted RBP8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 LENEPQ9Y5L5 61 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 IGHV1OR15-1A0A075B7D0 117 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 BORCS7-ASMTA0A0B4J1R7 106 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 GCHFRP30047 84 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms