RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 LOC107984640A0A0U1RRK4 108 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 FNDC10F2Z333 226 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 H3BQ15 152 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 NDUFA3O95167 84 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 IGLV2-23P01705 113 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 CRYGDP07320 174 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 BCL2P10415 239 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 GATA1P15976 413 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-206ENST00000507875 MDKP21741 143 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-206ENST00000507875 PRCDQ00LT1 54 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 C16orf82Q7Z2V1 217 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 RPP25LQ8N5L8 163 aaKnown RBP5.5□□□□□ -1.53
CLCN3-206ENST00000507875 NPCDR1Q9BY65 106 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 C2CD3Q4AC94 2353 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 ZFP92A6NM28 416 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 IGKV1D-33P01593 117 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 IGKV1-33P01594 117 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 FOLR2P14207 255 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 Q8N6K4 173 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 SLC39A9Q9NUM3 307 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 TRAV30A0A087WSZ9 112 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 TRAV3A0A0B4J244 114 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 C17orf112F2Z3M2 114 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 NUDT3O95989 172 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 MT-ND4LP03901 98 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 SAA1P0DJI8 122 aaPredicted RBP5.49□□□□□ -1.53
CLCN3-206ENST00000507875 NPY1RP25929 384 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 VDAC2P45880 294 aaPredicted RBP5.49□□□□□ -1.53
CLCN3-206ENST00000507875 C10orf25Q5T742 122 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 ZNF709Q8N972 641 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 GATD1Q8NB37 220 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 NIPSNAP3BQ9BS92 247 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 COMMD5Q9GZQ3 224 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 OR51B2Q9Y5P1 312 aa5.49□□□□□ -1.53
CLCN3-206ENST00000507875 CTXND1A0A1B0GTU2 59 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 LY6G6DO95868 133 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 FSHBP01225 129 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 SUB1P53999 127 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLCN3-206ENST00000507875 KLRD1Q13241 179 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 OR10G7Q8NGN6 311 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 TVP23CQ96ET8 276 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 SMR3AQ99954 134 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 C1QTNF4Q9BXJ3 329 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 MRPL16Q9NX20 251 aaKnown RBP5.48□□□□□ -1.53
CLCN3-206ENST00000507875 VAX2Q9UIW0 290 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 MTORP42345 2549 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 FLNAP21333 2647 aaKnown RBP5.48□□□□□ -1.53
CLCN3-206ENST00000507875 TEX50A0A1B0GTY4 177 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 IGKV1-16P04430 117 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 NTF3P20783 257 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 SAA4P35542 130 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 EMP1P54849 157 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 ERHP84090 104 aaKnown RBP5.48□□□□□ -1.53
CLCN3-206ENST00000507875 DIAPH2-AS1Q14236 149 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 BLNKQ8WV28 456 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 TMEM101Q96IK0 257 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 PLEKHA3Q9HB20 300 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 NDUFA4L2Q9NRX3 87 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 DOK5Q9P104 306 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 ZNRD1Q9P1U0 126 aa5.48□□□□□ -1.53
CLCN3-206ENST00000507875 A0A087WWC5 75 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 TMEM189A5PLL7 270 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 IFITM10A6NMD0 228 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 FABP5P3A8MUU1 101 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 IGHG4P01861 327 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 C2orf83Q53S99 150 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 PPP1R27Q86WC6 154 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 CIARTQ8N365 385 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-206ENST00000507875 FAM24BQ8N5W8 94 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 C19orf24Q9BVV8 132 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 SLC25A22Q9H936 323 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 SETD2Q9BYW2 2564 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-206ENST00000507875 FCN1O00602 326 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 FRMD6-AS1P0C7T7 363 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 RAB5AP20339 215 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 ACOT6Q3I5F7 207 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-206ENST00000507875 PVRIGQ6DKI7 326 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 Q6ZVQ6 151 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 YPEL4Q96NS1 127 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 ZNF580Q9UK33 172 aa5.47□□□□□ -1.53
CLCN3-206ENST00000507875 NIPBLQ6KC79 2804 aaeCLIP5.46□□□□□ -1.54
CLCN3-206ENST00000507875 B4DEV8 164 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 CD5LO43866 347 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 HLA-DRB1P01911 266 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 RPL27AP46776 148 aaKnown RBP5.46□□□□□ -1.54
CLCN3-206ENST00000507875 RPL29P47914 159 aaKnown RBP5.46□□□□□ -1.54
CLCN3-206ENST00000507875 ERVFC1-1P60608 527 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 MEF2BQ02080 365 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-206ENST00000507875 HRCT1Q6UXD1 115 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 EXOC3-AS1Q8N2X6 119 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 OR10D4PQ8NGN7 298 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 HILPDAQ9Y5L2 63 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 NF1P21359 2839 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 TNCP24821 2201 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 VPS13CQ709C8 3753 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 ACANP16112 2415 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 ABCA2Q9BZC7 2435 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 ARHGAP32A7KAX9 2087 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 TRAV40A0A0B4J280 105 aa5.46□□□□□ -1.54
CLCN3-206ENST00000507875 ZNF727A8MUV8 499 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms