RNA–Protein interactions for RNA: ENST00000505454.1

AC116563.1-201, humanhuman

TSL 3 BASIC

Gene AC116563.1, Length 396 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116563.1-201ENST00000505454 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 A0A0J9YY99 117 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 A0A1W2PPM0 123 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 C9orf170A2RU37 121 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 C5orf67F2Z3F1 127 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 H3BMG7 143 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 KLF7O75840 302 aaPredicted RBP0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 PPYP01298 95 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 IGLV3-1P01715 115 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 NBEAP1P0C6P0 100 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 MIR22HGQ0VDD5 57 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 GLIPR1L1Q6UWM5 242 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 TAC4Q86UU9 113 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 MORN4Q8NDC4 146 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 GINS2Q9Y248 185 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 NDUFAF1Q9Y375 327 aa0.59□□□□□ -2.31
AC116563.1-201ENST00000505454 PTPRFP10586 1907 aa0.59□□□□□ -2.32
AC116563.1-201ENST00000505454 N4BP2Q86UW6 1770 aaPredicted RBP0.59□□□□□ -2.32
AC116563.1-201ENST00000505454 A2MP01023 1474 aa0.59□□□□□ -2.32
AC116563.1-201ENST00000505454 NUP210Q8TEM1 1887 aaPredicted RBP0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 ERBINQ96RT1 1412 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 LOC107986453A0A1B0GWG9 222 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 A6NN06 94 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 RPL7P18124 248 aaKnown RBP0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 RPL22P35268 128 aaKnown RBP0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 DNAJB13P59910 316 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 IZUMO2Q6UXV1 221 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 CASC2Q6XLA1 102 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 TMEM229BQ8NBD8 167 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 OR5A2Q8NGI9 324 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 NAT14Q8WUY8 206 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 CCDC115Q96NT0 180 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 CIB3Q96Q77 187 aaPredicted RBP0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 TAF9BQ9HBM6 251 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 C19orf12Q9NSK7 152 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 BOKQ9UMX3 212 aaPredicted RBP0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 SIP14410 1827 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 TCOF1Q13428 1488 aaKnown RBP0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 MGAMO43451 1857 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 DLC1Q96QB1 1528 aa0.58□□□□□ -2.32
AC116563.1-201ENST00000505454 MUC5ACP98088 5654 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 COL1A1P02452 1464 aaPredicted RBP0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 LOC107984640A0A0U1RRK4 108 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 J3KT08 172 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 IGHV3-30P01768 117 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 IGHV3-30-5P0DP03 117 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 RPS3P23396 243 aaKnown RBP eCLIP0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 ETV6P41212 452 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 EFNA4P52798 201 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 ASB16-AS1Q495Z4 193 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 HRCT1Q6UXD1 115 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 PYDC1Q8WXC3 89 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 CLEC2BQ92478 149 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 AP1S3Q96PC3 154 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 WFDC10AQ9H1F0 79 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 MRPL40Q9NQ50 206 aaKnown RBP0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 CBLN4Q9NTU7 201 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 TRAPPC2LQ9UL33 140 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 MPC1Q9Y5U8 109 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 MUC4Q99102 2169 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 CASP8AP2Q9UKL3 1982 aa0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 SYNE2Q8WXH0 6885 aaKnown RBP0.57□□□□□ -2.32
AC116563.1-201ENST00000505454 ANKRD31Q8N7Z5 1873 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 E9PCH4 1651 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 BORCS7-ASMTA0A0B4J1R7 106 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 C3orf85A0A1B0GTC6 90 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 A0A1B0GX51 115 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 IFITM5A6NNB3 132 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 UQCRQO14949 82 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 SULT1C4O75897 302 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 SCTP09683 121 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 CCL4P13236 92 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 PDE6GP18545 87 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 CRYGSP22914 178 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 FOXA3P55318 350 aaPredicted RBP0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 AKAP14Q86UN6 197 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 C10orf111Q8N326 155 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 TEX29Q8N6K0 151 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 Q8N6K4 173 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 C5orf17Q8NAS9 161 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 NABP2Q9BQ15 211 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 ZDBF2Q9HCK1 2354 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 ZGRF1Q86YA3 2104 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 TET1Q8NFU7 2136 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 MED23Q9ULK4 1368 aa0.56□□□□□ -2.32
AC116563.1-201ENST00000505454 FAM135BQ49AJ0 1406 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 ARAP1Q96P48 1450 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 TRAV36DV7A0A075B6V5 113 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 TRAV23DV6A0A075B6W5 121 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 PNMA8CA0A1B0GUJ8 204 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 BBIP1A8MTZ0 92 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 DEGS1O15121 323 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 DPM2O94777 84 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 DBIP07108 87 aaKnown RBP0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 SCGB1A1P11684 91 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 PSPHP78330 225 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 OCIAD2Q56VL3 154 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 ZCCHC23Q6ZST2 131 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 C3orf62Q6ZUJ4 267 aa0.55□□□□□ -2.32
AC116563.1-201ENST00000505454 SBSPONQ8IVN8 264 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms