RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ZNF493Q6ZR52 646 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 C9orf47Q6ZRZ4 202 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 OR2G3Q8NGZ4 309 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 RXFP4Q8TDU9 374 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 GNPNAT1Q96EK6 184 aaPredicted RBP4.99□□□□□ -1.61
TOP3A-207ENST00000493648 ZNF503Q96F45 646 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 C16orf74Q96GX8 76 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 PSMG3Q9BT73 122 aaPredicted RBP4.99□□□□□ -1.61
TOP3A-207ENST00000493648 AGPAT4-IT1Q9H0P7 198 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 Q9H3A6 140 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 APLNQ9ULZ1 77 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 TNFSF18Q9UNG2 199 aa4.99□□□□□ -1.61
TOP3A-207ENST00000493648 CSMD3Q7Z407 3707 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 KMT2CQ8NEZ4 4911 aaKnown RBP4.98□□□□□ -1.61
TOP3A-207ENST00000493648 IGHV4-4A0A075B6R2 117 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 TRAV12-3A0A0B4J271 114 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 RBAKDNA6NC62 111 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 PGPA6NDG6 321 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 J3KRW8 73 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 TAAR5O14804 337 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 PRM2P04554 102 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 GPX1P07203 203 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 AZU1P20160 251 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 RNASE4P34096 147 aaKnown RBP4.98□□□□□ -1.61
TOP3A-207ENST00000493648 CDC34P49427 236 aaPredicted RBP4.98□□□□□ -1.61
TOP3A-207ENST00000493648 ZNF138P52744 262 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 KIR3DS1Q14943 382 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 GFI1BQ5VTD9 330 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 CMTM2Q8TAZ6 248 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 PHYHIPLQ96FC7 376 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 FAM210BQ96KR6 192 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 PYGO2Q9BRQ0 406 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 NDUFAF3Q9BU61 184 aa4.98□□□□□ -1.61
TOP3A-207ENST00000493648 ACTR3CQ9C0K3 210 aaPredicted RBP4.98□□□□□ -1.61
TOP3A-207ENST00000493648 TIMM8BQ9Y5J9 83 aaPredicted RBP4.98□□□□□ -1.61
TOP3A-207ENST00000493648 hCG_2014768A0A024R1R8 64 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 IGKV2-40A0A087WW87 121 aaPredicted RBP4.97□□□□□ -1.61
TOP3A-207ENST00000493648 TRBV7-9A0A0J9YWB2 115 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 C7orf71A4D174 169 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 RNF222A6NCQ9 220 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 CBY3A6NI87 242 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 HMGB3O15347 200 aaKnown RBP4.97□□□□□ -1.61
TOP3A-207ENST00000493648 ARPC5O15511 151 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 IGKV2D-40P01614 121 aaPredicted RBP4.97□□□□□ -1.61
TOP3A-207ENST00000493648 STAG3L2P0CL84 134 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 STAG3L3P0CL85 134 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 DEFB130BP0DP73 79 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 DEFB130AP0DP74 79 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 HTN3P15516 51 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 RPL7L1Q6DKI1 246 aaKnown RBP4.97□□□□□ -1.61
TOP3A-207ENST00000493648 ARL6IP6Q8N6S5 226 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 TMEM263Q8WUH6 116 aaKnown RBP4.97□□□□□ -1.61
TOP3A-207ENST00000493648 RAB24Q969Q5 203 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 FAM19A4Q96LR4 140 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 HYLS1Q96M11 299 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 VGLL1Q99990 258 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 OTORQ9NRC9 128 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 ZNF492Q9P255 531 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 STARD9Q9P2P6 4700 aa4.97□□□□□ -1.61
TOP3A-207ENST00000493648 PLAC8L1A1L4L8 177 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 SNURFLB1AK76 121 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 KLLNB2CW77 178 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 DIRC3C9JPN6 131 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 RGS13O14921 159 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 ZNF324O75467 553 aaPredicted RBP4.96□□□□□ -1.62
TOP3A-207ENST00000493648 EIF3GO75821 320 aaKnown RBP eCLIP4.96□□□□□ -1.62
TOP3A-207ENST00000493648 CXorf1O96002 111 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 ARL14EPLP0DKL9 152 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 CRISP2P16562 243 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 CD300CQ08708 224 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 LINC00528Q8N1L1 170 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 RNASE8Q8TDE3 154 aaKnown RBP4.96□□□□□ -1.62
TOP3A-207ENST00000493648 ST6GAL2Q96JF0 529 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 LINC00467Q9BRT7 94 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 SH3BGRL3Q9H299 93 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 NOP10Q9NPE3 64 aaKnown RBP4.96□□□□□ -1.62
TOP3A-207ENST00000493648 TMEM167BQ9NRX6 74 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 RPH3ALQ9UNE2 315 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 LENEPQ9Y5L5 61 aa4.96□□□□□ -1.62
TOP3A-207ENST00000493648 A0A0D9SG52 128 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 HMSDA8MTL9 139 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 F5H768 121 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 G3V3Q6 166 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 SMLR1H3BR10 107 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 K7EQM0 130 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 ATP5G1P05496 136 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 GCHFRP30047 84 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 ATP5G3P48201 142 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 BTN1A1Q13410 526 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 ANXA2RQ3ZCQ2 193 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 AKR1C8PQ5T2L2 129 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 EIF4E3Q8N5X7 224 aaKnown RBP4.95□□□□□ -1.62
TOP3A-207ENST00000493648 ZFAND2AQ8N6M9 145 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 ZNF680Q8NEM1 530 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 SUN5Q8TC36 379 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 TMED6Q8WW62 240 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 ARPC5LQ9BPX5 153 aa4.95□□□□□ -1.62
TOP3A-207ENST00000493648 DYNC2H1Q8NCM8 4307 aaKnown RBP4.95□□□□□ -1.62
TOP3A-207ENST00000493648 IGHV1OR15-1A0A075B7D0 117 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 CTXND1A0A1B0GTU2 59 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms