RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 ZNF253O75346 499 aa13.96□□□□□ -0.17
NELFE-212ENST00000492539 SNRPCP09234 159 aaKnown RBP13.96□□□□□ -0.17
NELFE-212ENST00000492539 PYYP10082 97 aa13.96□□□□□ -0.17
NELFE-212ENST00000492539 HIST1H1EP10412 219 aaKnown RBP13.96□□□□□ -0.17
NELFE-212ENST00000492539 BAP18Q8IXM2 172 aa13.96□□□□□ -0.17
NELFE-212ENST00000492539 ZNRF2Q8NHG8 242 aa13.96□□□□□ -0.17
NELFE-212ENST00000492539 GNPNAT1Q96EK6 184 aaPredicted RBP13.96□□□□□ -0.17
NELFE-212ENST00000492539 SAT2Q96F10 170 aaPredicted RBP13.96□□□□□ -0.17
NELFE-212ENST00000492539 ATG101Q9BSB4 218 aa13.96□□□□□ -0.17
NELFE-212ENST00000492539 ZNF586Q9NXT0 402 aa13.96□□□□□ -0.17
NELFE-212ENST00000492539 NBDYA0A0U1RRE5 68 aa13.95□□□□□ -0.18
NELFE-212ENST00000492539 H3BTX0 84 aa13.95□□□□□ -0.18
NELFE-212ENST00000492539 RAB2AP61019 212 aa13.95□□□□□ -0.18
NELFE-212ENST00000492539 SERF2P84101 59 aa13.95□□□□□ -0.18
NELFE-212ENST00000492539 PSG3Q16557 428 aa13.95□□□□□ -0.18
NELFE-212ENST00000492539 ARPC5LQ9BPX5 153 aa13.95□□□□□ -0.18
NELFE-212ENST00000492539 SH3BGRL3Q9H299 93 aa13.95□□□□□ -0.18
NELFE-212ENST00000492539 OR51M1Q9H341 326 aa13.95□□□□□ -0.18
NELFE-212ENST00000492539 CYTL1Q9NRR1 136 aa13.95□□□□□ -0.18
NELFE-212ENST00000492539 TRBV19A0A075B6N1 114 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 A0A0D9SG52 128 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 BOLA2-SMG1P6H3BVE0 249 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 DEFB130BP0DP73 79 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 DEFB130AP0DP74 79 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 AZU1P20160 251 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 TAS2R45P59539 299 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 PDE6HQ13956 83 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 KHDC3LQ587J8 217 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 ZNF738Q8NE65 137 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 OR10G4Q8NGN3 311 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 OR10G9Q8NGN4 311 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 OR10G7Q8NGN6 311 aa13.94□□□□□ -0.18
NELFE-212ENST00000492539 TRAV12-2A0A075B6T6 113 aa13.93□□□□□ -0.18
NELFE-212ENST00000492539 CDK2AP2O75956 126 aa13.93□□□□□ -0.18
NELFE-212ENST00000492539 MBP02144 154 aa13.93□□□□□ -0.18
NELFE-212ENST00000492539 AKAP14Q86UN6 197 aa13.93□□□□□ -0.18
NELFE-212ENST00000492539 C6orf223Q8N319 242 aa13.93□□□□□ -0.18
NELFE-212ENST00000492539 PAXXQ9BUH6 204 aa13.93□□□□□ -0.18
NELFE-212ENST00000492539 A0A1W2PPV4 95 aa13.92□□□□□ -0.18
NELFE-212ENST00000492539 C16orf90A8MZG2 172 aa13.92□□□□□ -0.18
NELFE-212ENST00000492539 F5H768 121 aa13.92□□□□□ -0.18
NELFE-212ENST00000492539 OR7C2O60412 319 aa13.92□□□□□ -0.18
NELFE-212ENST00000492539 ATP5G1P05496 136 aa13.92□□□□□ -0.18
NELFE-212ENST00000492539 ATP5G3P48201 142 aa13.92□□□□□ -0.18
NELFE-212ENST00000492539 FAM122CQ6P4D5 195 aa13.92□□□□□ -0.18
NELFE-212ENST00000492539 TMEM256Q8N2U0 113 aa13.92□□□□□ -0.18
NELFE-212ENST00000492539 FXYD5Q96DB9 178 aa13.92□□□□□ -0.18
NELFE-212ENST00000492539 ZNF503Q96F45 646 aa13.92□□□□□ -0.18
NELFE-212ENST00000492539 CBY3A6NI87 242 aa13.91□□□□□ -0.18
NELFE-212ENST00000492539 BCL2L11O43521 198 aa13.91□□□□□ -0.18
NELFE-212ENST00000492539 NDUFB4O95168 129 aa13.91□□□□□ -0.18
NELFE-212ENST00000492539 NUDT3O95989 172 aa13.91□□□□□ -0.18
NELFE-212ENST00000492539 BLNKQ8WV28 456 aa13.91□□□□□ -0.18
NELFE-212ENST00000492539 RNF141Q8WVD5 230 aa13.91□□□□□ -0.18
NELFE-212ENST00000492539 RPUSD4Q96CM3 377 aaKnown RBP13.91□□□□□ -0.18
NELFE-212ENST00000492539 LINC00588Q9Y4M8 146 aa13.91□□□□□ -0.18
NELFE-212ENST00000492539 KANTRA0A1W2PQU2 76 aa13.9□□□□□ -0.18
NELFE-212ENST00000492539 C1QBP02746 253 aa13.9□□□□□ -0.18
NELFE-212ENST00000492539 OR10J4P0C629 311 aa13.9□□□□□ -0.18
NELFE-212ENST00000492539 NBEAP1P0C6P0 100 aa13.9□□□□□ -0.18
NELFE-212ENST00000492539 CDC34P49427 236 aaPredicted RBP13.9□□□□□ -0.18
NELFE-212ENST00000492539 TAS2R60P59551 318 aa13.9□□□□□ -0.18
NELFE-212ENST00000492539 HIST1H1AQ02539 215 aaPredicted RBP13.9□□□□□ -0.18
NELFE-212ENST00000492539 OR8A1Q8NGG7 326 aa13.9□□□□□ -0.18
NELFE-212ENST00000492539 MRPL53Q96EL3 112 aaKnown RBP13.9□□□□□ -0.18
NELFE-212ENST00000492539 C16orf74Q96GX8 76 aa13.9□□□□□ -0.18
NELFE-212ENST00000492539 LINC01587Q99440 93 aa13.9□□□□□ -0.18
NELFE-212ENST00000492539 A0A1B0GVG6 124 aa13.89□□□□□ -0.19
NELFE-212ENST00000492539 CCL18P55774 89 aa13.89□□□□□ -0.19
NELFE-212ENST00000492539 UBE2L3P68036 154 aaKnown RBP13.89□□□□□ -0.19
NELFE-212ENST00000492539 PQLC2Q6ZP29 291 aa13.89□□□□□ -0.19
NELFE-212ENST00000492539 TMUB2Q71RG4 321 aa13.89□□□□□ -0.19
NELFE-212ENST00000492539 EIF3GO75821 320 aaKnown RBP eCLIP13.88□□□□□ -0.19
NELFE-212ENST00000492539 AAMDCQ9H7C9 122 aa13.88□□□□□ -0.19
NELFE-212ENST00000492539 PRELID1Q9Y255 219 aa13.88□□□□□ -0.19
NELFE-212ENST00000492539 PFDN1O60925 122 aa13.87□□□□□ -0.19
NELFE-212ENST00000492539 STAG3L2P0CL84 134 aa13.87□□□□□ -0.19
NELFE-212ENST00000492539 STAG3L3P0CL85 134 aa13.87□□□□□ -0.19
NELFE-212ENST00000492539 RNASE8Q8TDE3 154 aaKnown RBP13.87□□□□□ -0.19
NELFE-212ENST00000492539 RAB24Q969Q5 203 aa13.87□□□□□ -0.19
NELFE-212ENST00000492539 PHYHIPLQ96FC7 376 aa13.87□□□□□ -0.19
NELFE-212ENST00000492539 HYLS1Q96M11 299 aa13.87□□□□□ -0.19
NELFE-212ENST00000492539 ZNF471Q9BX82 626 aaPredicted RBP13.87□□□□□ -0.19
NELFE-212ENST00000492539 ACTR3CQ9C0K3 210 aaPredicted RBP13.87□□□□□ -0.19
NELFE-212ENST00000492539 TIMM8BQ9Y5J9 83 aaPredicted RBP13.87□□□□□ -0.19
NELFE-212ENST00000492539 PRAC2D3DTV9 90 aa13.86□□□□□ -0.19
NELFE-212ENST00000492539 CDKN1BP46527 198 aa13.86□□□□□ -0.19
NELFE-212ENST00000492539 AKR1C8PQ5T2L2 129 aa13.86□□□□□ -0.19
NELFE-212ENST00000492539 ZNF493Q6ZR52 646 aa13.86□□□□□ -0.19
NELFE-212ENST00000492539 EXOC3-AS1Q8N2X6 119 aa13.86□□□□□ -0.19
NELFE-212ENST00000492539 MAPKAPK5-AS1Q8N8E1 139 aa13.86□□□□□ -0.19
NELFE-212ENST00000492539 TMEM263Q8WUH6 116 aaKnown RBP13.86□□□□□ -0.19
NELFE-212ENST00000492539 PPP1R14DQ9NXH3 145 aa13.86□□□□□ -0.19
NELFE-212ENST00000492539 HMGB3O15347 200 aaKnown RBP13.85□□□□□ -0.19
NELFE-212ENST00000492539 EIF5AP63241 154 aaKnown RBP13.85□□□□□ -0.19
NELFE-212ENST00000492539 LGALSLQ3ZCW2 172 aaPredicted RBP13.85□□□□□ -0.19
NELFE-212ENST00000492539 LYPD1Q8N2G4 141 aa13.85□□□□□ -0.19
NELFE-212ENST00000492539 OR10J6PQ8NGY7 276 aa13.85□□□□□ -0.19
NELFE-212ENST00000492539 M0R3E3 92 aa13.84□□□□□ -0.19
NELFE-212ENST00000492539 SEC11BP0C7V7 166 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms