RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SSX7Q7RTT5 188 aa6.12□□□□□ -1.43
NUP50-217ENST00000491860 ENKURQ8TC29 256 aa6.12□□□□□ -1.43
NUP50-217ENST00000491860 UPK3BQ9BT76 320 aa6.12□□□□□ -1.43
NUP50-217ENST00000491860 NPCDR1Q9BY65 106 aa6.12□□□□□ -1.43
NUP50-217ENST00000491860 NMES1Q9C002 83 aa6.12□□□□□ -1.43
NUP50-217ENST00000491860 TRGV2A0A075B6R0 118 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 TRAV5A0A0B4J249 113 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 GAGE12BA1L429 117 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 KLLNB2CW77 178 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 H3BTX0 84 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 GAGE7O76087 117 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 GPX1P07203 203 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 GAGE12FP0CL80 117 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 GAGE12GP0CL81 117 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 GAGE12IP0CL82 117 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 PET100P0DJ07 73 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 SLAQ13239 276 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 C9orf47Q6ZRZ4 202 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 LYPD1Q8N2G4 141 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 EIF4E3Q8N5X7 224 aaKnown RBP6.11□□□□□ -1.43
NUP50-217ENST00000491860 Q9H8V8 135 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 LINC00588Q9Y4M8 146 aa6.11□□□□□ -1.43
NUP50-217ENST00000491860 J3KRW8 73 aa6.1□□□□□ -1.43
NUP50-217ENST00000491860 SNRPCP09234 159 aaKnown RBP6.1□□□□□ -1.43
NUP50-217ENST00000491860 CSN1S1P47710 185 aa6.1□□□□□ -1.43
NUP50-217ENST00000491860 OR5C1Q8NGR4 320 aa6.1□□□□□ -1.43
NUP50-217ENST00000491860 FAM19A4Q96LR4 140 aa6.1□□□□□ -1.43
NUP50-217ENST00000491860 ARPC5LQ9BPX5 153 aa6.1□□□□□ -1.43
NUP50-217ENST00000491860 OR51M1Q9H341 326 aa6.1□□□□□ -1.43
NUP50-217ENST00000491860 Q9H3A6 140 aa6.1□□□□□ -1.43
NUP50-217ENST00000491860 MRPS16Q9Y3D3 137 aaKnown RBP6.1□□□□□ -1.43
NUP50-217ENST00000491860 RBAKDNA6NC62 111 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 C16orf90A8MZG2 172 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 RGS13O14921 159 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 ZNF324O75467 553 aaPredicted RBP6.09□□□□□ -1.43
NUP50-217ENST00000491860 NDUFB4O95168 129 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 NBEAP1P0C6P0 100 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 TCL1AP56279 114 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 TAS2R45P59539 299 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 ICAM4Q14773 271 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 KIR3DS1Q14943 382 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 BLNKQ8WV28 456 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 PAXXQ9BUH6 204 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 SLC25A2Q9BXI2 301 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 PARD6GQ9BYG4 376 aaPredicted RBP6.09□□□□□ -1.43
NUP50-217ENST00000491860 WDR61Q9GZS3 305 aaKnown RBP6.09□□□□□ -1.43
NUP50-217ENST00000491860 FUT9Q9Y231 359 aa6.09□□□□□ -1.43
NUP50-217ENST00000491860 IGHV1OR15-1A0A075B7D0 117 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 TRGV1A0A0A0MS02 117 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 A0A0J9YY99 117 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 M0R3E3 92 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 UPK1BO75841 260 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 CDK2AP2O75956 126 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 PYYP10082 97 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 HOXA5P20719 270 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 RNASE4P34096 147 aaKnown RBP6.08□□□□□ -1.44
NUP50-217ENST00000491860 ZNF138P52744 262 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 NHLH2Q02577 135 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 ZNF415Q09FC8 603 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 KHDC3LQ587J8 217 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 FAM74A1Q5RGS3 127 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 Q6ZTI0 123 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 C11orf72Q8NBR9 251 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 THAP6Q8TBB0 222 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 ST6GAL2Q96JF0 529 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 AGPAT4-IT1Q9H0P7 198 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 TMPRSS5Q9H3S3 457 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 GSN-AS1Q9NRJ2 163 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 ZNF492Q9P255 531 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 LENEPQ9Y5L5 61 aa6.08□□□□□ -1.44
NUP50-217ENST00000491860 HERC1Q15751 4861 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 K7EP13 123 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 OR7C2O60412 319 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 SPINK4O60575 86 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 IFNA5P01569 189 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 DEFA1P59665 94 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 DEFA3P59666 94 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 TNP2Q05952 138 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 ERCC8Q13216 396 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 BTN1A1Q13410 526 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 ESRGQ1W209 222 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 FAM122CQ6P4D5 195 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 EXOC3-AS1Q8N2X6 119 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 ARL6IP6Q8N6S5 226 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 SCGB1C1Q8TD33 95 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 TMED6Q8WW62 240 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 FAM167A-AS1Q96KT0 104 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 ATP5SQ99766 215 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 VGLL1Q99990 258 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 PRO0255Q9UI72 69 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 ICOSQ9Y6W8 199 aa6.07□□□□□ -1.44
NUP50-217ENST00000491860 TRAV9-2A0A087WT02 112 aa6.06□□□□□ -1.44
NUP50-217ENST00000491860 INMT-MINDY4F8WBC2 141 aa6.06□□□□□ -1.44
NUP50-217ENST00000491860 EREGO14944 169 aa6.06□□□□□ -1.44
NUP50-217ENST00000491860 SIVA1O15304 175 aa6.06□□□□□ -1.44
NUP50-217ENST00000491860 PAX4O43316 350 aa6.06□□□□□ -1.44
NUP50-217ENST00000491860 PRB4P10163 310 aaPredicted RBP6.06□□□□□ -1.44
NUP50-217ENST00000491860 CD300CQ08708 224 aa6.06□□□□□ -1.44
NUP50-217ENST00000491860 ZNF266Q14584 549 aa6.06□□□□□ -1.44
NUP50-217ENST00000491860 MRPL23Q16540 153 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms