RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 FNDC10F2Z333 226 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 H0YJW9 148 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 ISLRO14498 428 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 CD5LO43866 347 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 APCSP02743 223 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 ZNF32P17041 273 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 IGHV1-2P23083 117 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 GCHFRP30047 84 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 ATP5G3P48201 142 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 GNG4P50150 75 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 ZNF83P51522 516 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 DSCR4P56555 118 aaPredicted RBP3.57□□□□□ -1.84
RTN4-215ENST00000491592 UBE2G1P62253 170 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 FBXL19-AS1Q494R0 122 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 ARHGAP21Q5T5U3 1957 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 MRPL54Q6P161 138 aaKnown RBP3.57□□□□□ -1.84
RTN4-215ENST00000491592 UNQ5815/PRO19632Q6UWF5 114 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 TMEM136Q6ZRR5 245 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 RPS19BP1Q86WX3 136 aaKnown RBP3.57□□□□□ -1.84
RTN4-215ENST00000491592 Q8IYB0 196 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 DRAM1Q8N682 238 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 TSKUQ8WUA8 353 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 TMEM190Q8WZ59 177 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 LITAFQ99732 161 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 ANAPC13Q9BS18 74 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 FAM103A1Q9BTL3 118 aaKnown RBP3.57□□□□□ -1.84
RTN4-215ENST00000491592 SCRT2Q9NQ03 307 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 TMEM167BQ9NRX6 74 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 V9GYV3 84 aa3.57□□□□□ -1.84
RTN4-215ENST00000491592 PCDH15Q96QU1 1955 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 TNRC6BQ9UPQ9 1833 aaKnown RBP3.56□□□□□ -1.84
RTN4-215ENST00000491592 IGHV1OR15-1A0A075B7D0 117 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 SMIM27A0A1W2PRY6 76 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 M0R1X1 148 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 TAX1BP3O14907 124 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 DPM2O94777 84 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 IGHV4-34P06331 123 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 ARL14EPLP0DKL9 152 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 NTF3P20783 257 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 SYNJ2BPP57105 145 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 SEC11AP67812 179 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 PLGLB1Q02325 96 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 TFF3Q07654 80 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 ERCC8Q13216 396 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 C6orf99Q4VX62 202 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 LDLRAD2Q5SZI1 272 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 LYRM7Q5U5X0 104 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 LCN12Q6JVE5 192 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 ACP7Q6ZNF0 438 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 ZNF497Q6ZNH5 498 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 GTF2H5Q6ZYL4 71 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 AAED1Q7RTV5 226 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 ZNF645Q8N7E2 425 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 OR8B3Q8NGG8 313 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 LMX1AQ8TE12 382 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 AP1S3Q96PC3 154 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 OR8B2Q96RD0 313 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 LINC01587Q99440 93 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 CLEC7AQ9BXN2 247 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 DEFB126Q9BYW3 111 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 IMUPQ9GZP8 106 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 TMEM191AQ9H0A3 160 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 MPC1Q9Y5U8 109 aa3.56□□□□□ -1.84
RTN4-215ENST00000491592 FER1L5A0AVI2 2057 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 TRBV20OR9-2A0A075B6H5 130 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 IGHV4-4A0A075B6R2 117 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 SMIM26A0A096LP01 95 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 IGHV7-81A0A0B4J1V7 117 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 TRAV4A0A0B4J268 109 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 ODAMA1E959 279 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 K7EQG2 157 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 OVOL1O14753 267 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 CCL5P13501 91 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 CRYBB3P26998 211 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 CXCL12P48061 93 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 CRIP2P52943 208 aaPredicted RBP3.55□□□□□ -1.84
RTN4-215ENST00000491592 MP68P56378 58 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 EDDM3BP56851 147 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 EIF4EBP1Q13541 118 aaPredicted RBP3.55□□□□□ -1.84
RTN4-215ENST00000491592 C17orf58Q2M2W7 97 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 BVES-AS1Q5T3Y7 98 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 Q6P435 159 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 SLC25A34Q6PIV7 304 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 EXOC3-AS1Q8N2X6 119 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 Q8N7P7 452 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 SLC25A40Q8TBP6 338 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 C18orf32Q8TCD1 76 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 CHCHD1Q96BP2 118 aaKnown RBP3.55□□□□□ -1.84
RTN4-215ENST00000491592 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 HSD17B10Q99714 261 aaKnown RBP3.55□□□□□ -1.84
RTN4-215ENST00000491592 DERL1Q9BUN8 251 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 RTL8AQ9BWD3 113 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 SPANXDQ9BXN6 97 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 NPVFQ9HCQ7 196 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 RBM12B-AS1Q9P1G2 102 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 DPM3Q9P2X0 92 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 CLCF1Q9UBD9 225 aa3.55□□□□□ -1.84
RTN4-215ENST00000491592 SOX21Q9Y651 276 aaPredicted RBP3.55□□□□□ -1.84
RTN4-215ENST00000491592 CHCHD2Q9Y6H1 151 aaPredicted RBP3.55□□□□□ -1.84
RTN4-215ENST00000491592 GTF3C1Q12789 2109 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms