RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TRAV8-1A0A0A6YYK1 113 aa17.64■□□□□ 0.41
USF3-203ENST00000491165 C20orf202A1L168 122 aa17.64■□□□□ 0.41
USF3-203ENST00000491165 TMEM95Q3KNT9 176 aa17.64■□□□□ 0.41
USF3-203ENST00000491165 SRSF8Q9BRL6 282 aaKnown RBP17.64■□□□□ 0.41
USF3-203ENST00000491165 LINC00527Q9UJ94 153 aa17.64■□□□□ 0.41
USF3-203ENST00000491165 LAMTOR2Q9Y2Q5 125 aa17.64■□□□□ 0.41
USF3-203ENST00000491165 ATP6V0E1O15342 81 aa17.63■□□□□ 0.41
USF3-203ENST00000491165 FOXA3P55318 350 aaPredicted RBP17.63■□□□□ 0.41
USF3-203ENST00000491165 GOLT1AQ6ZVE7 132 aa17.63■□□□□ 0.41
USF3-203ENST00000491165 EXOC3-AS1Q8N2X6 119 aa17.63■□□□□ 0.41
USF3-203ENST00000491165 TFPI2P48307 235 aa17.63■□□□□ 0.41
USF3-203ENST00000491165 PRNTQ86SH4 94 aa17.63■□□□□ 0.41
USF3-203ENST00000491165 TMEM190Q8WZ59 177 aa17.63■□□□□ 0.41
USF3-203ENST00000491165 ARPC1AQ92747 370 aa17.63■□□□□ 0.41
USF3-203ENST00000491165 CHCHD1Q96BP2 118 aaKnown RBP17.63■□□□□ 0.41
USF3-203ENST00000491165 IGLV2-11P01706 119 aa17.62■□□□□ 0.41
USF3-203ENST00000491165 TMEM70Q9BUB7 260 aa17.62■□□□□ 0.41
USF3-203ENST00000491165 CHEK1O14757 476 aa17.62■□□□□ 0.41
USF3-203ENST00000491165 IGKV1-17P01599 117 aa17.62■□□□□ 0.41
USF3-203ENST00000491165 IGHG2P01859 326 aa17.62■□□□□ 0.41
USF3-203ENST00000491165 C2CD3Q4AC94 2353 aa17.61■□□□□ 0.41
USF3-203ENST00000491165 TRBV6-1A0A0K0K1D8 114 aa17.61■□□□□ 0.41
USF3-203ENST00000491165 RNASE1P07998 156 aaKnown RBP17.61■□□□□ 0.41
USF3-203ENST00000491165 NPSP0C0P6 89 aa17.61■□□□□ 0.41
USF3-203ENST00000491165 ZNF702PQ9H963 129 aa17.61■□□□□ 0.41
USF3-203ENST00000491165 CLEC5AQ9NY25 188 aa17.61■□□□□ 0.41
USF3-203ENST00000491165 TSPOP30536 169 aa17.6■□□□□ 0.41
USF3-203ENST00000491165 SHANK2-AS3Q9BTD1 123 aa17.6■□□□□ 0.41
USF3-203ENST00000491165 RNF24Q9Y225 148 aa17.6■□□□□ 0.41
USF3-203ENST00000491165 ZFP30Q9Y2G7 519 aa17.6■□□□□ 0.41
USF3-203ENST00000491165 LOC102724200A0A096LPH7 203 aaPredicted RBP17.6■□□□□ 0.41
USF3-203ENST00000491165 G3V318 75 aa17.6■□□□□ 0.41
USF3-203ENST00000491165 M0QZ24 198 aa17.6■□□□□ 0.41
USF3-203ENST00000491165 BPIFA4PQ86YQ2 179 aa17.6■□□□□ 0.41
USF3-203ENST00000491165 NDFIP1Q9BT67 221 aa17.6■□□□□ 0.41
USF3-203ENST00000491165 MRPS16Q9Y3D3 137 aaKnown RBP17.6■□□□□ 0.41
USF3-203ENST00000491165 TRBV19A0A075B6N1 114 aa17.59■□□□□ 0.41
USF3-203ENST00000491165 K7EIM0 57 aa17.59■□□□□ 0.41
USF3-203ENST00000491165 HAX1O00165 279 aa17.59■□□□□ 0.41
USF3-203ENST00000491165 C16orf54Q6UWD8 224 aa17.59■□□□□ 0.41
USF3-203ENST00000491165 STPG4Q8N801 248 aa17.59■□□□□ 0.41
USF3-203ENST00000491165 OR4F17Q8NGA8 305 aa17.59■□□□□ 0.41
USF3-203ENST00000491165 IGHV1-24A0A0C4DH33 117 aa17.59■□□□□ 0.41
USF3-203ENST00000491165 H3BRN7 92 aa17.58■□□□□ 0.4
USF3-203ENST00000491165 LINC00614P0C842 121 aa17.58■□□□□ 0.4
USF3-203ENST00000491165 IGLL1P15814 213 aa17.58■□□□□ 0.4
USF3-203ENST00000491165 SPATA12Q7Z6I5 190 aa17.58■□□□□ 0.4
USF3-203ENST00000491165 TMEM75Q8N9X5 138 aa17.58■□□□□ 0.4
USF3-203ENST00000491165 NPFFR1Q9GZQ6 430 aa17.58■□□□□ 0.4
USF3-203ENST00000491165 CRXO43186 299 aaPredicted RBP17.57■□□□□ 0.4
USF3-203ENST00000491165 TCF21O43680 179 aa17.57■□□□□ 0.4
USF3-203ENST00000491165 APOHP02749 345 aaPredicted RBP17.57■□□□□ 0.4
USF3-203ENST00000491165 ECSCRQ19T08 205 aa17.57■□□□□ 0.4
USF3-203ENST00000491165 Q6ZSV7 163 aa17.57■□□□□ 0.4
USF3-203ENST00000491165 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.56■□□□□ 0.4
USF3-203ENST00000491165 K7EQM0 130 aa17.56■□□□□ 0.4
USF3-203ENST00000491165 LEPROTL1O95214 131 aa17.56■□□□□ 0.4
USF3-203ENST00000491165 LYPD1Q8N2G4 141 aa17.56■□□□□ 0.4
USF3-203ENST00000491165 ZC2HC1AQ96GY0 325 aa17.56■□□□□ 0.4
USF3-203ENST00000491165 IGF1P05019 195 aa17.56■□□□□ 0.4
USF3-203ENST00000491165 SIGLEC15Q6ZMC9 328 aa17.56■□□□□ 0.4
USF3-203ENST00000491165 C17orf77Q96MU5 243 aa17.56■□□□□ 0.4
USF3-203ENST00000491165 C19orf54Q5BKX5 351 aa17.55■□□□□ 0.4
USF3-203ENST00000491165 RNF125Q96EQ8 232 aa17.55■□□□□ 0.4
USF3-203ENST00000491165 OR4C46A6NHA9 309 aa17.54■□□□□ 0.4
USF3-203ENST00000491165 SYS1-DBNDD2H3BUS1 97 aa17.54■□□□□ 0.4
USF3-203ENST00000491165 Q8N2B8 174 aa17.54■□□□□ 0.4
USF3-203ENST00000491165 ZNF491Q8N8L2 437 aa17.54■□□□□ 0.4
USF3-203ENST00000491165 A0A1B0GUT8 65 aa17.54■□□□□ 0.4
USF3-203ENST00000491165 ZNF785A8K8V0 405 aa17.54■□□□□ 0.4
USF3-203ENST00000491165 NDUFB8O95169 186 aa17.54■□□□□ 0.4
USF3-203ENST00000491165 IL4P05112 153 aa17.54■□□□□ 0.4
USF3-203ENST00000491165 UNQ5815/PRO19632Q6UWF5 114 aa17.54■□□□□ 0.4
USF3-203ENST00000491165 C10orf99Q6UWK7 81 aa17.54■□□□□ 0.4
USF3-203ENST00000491165 FBN1P35555 2871 aaKnown RBP17.54■□□□□ 0.4
USF3-203ENST00000491165 OR5AL1P0C617 328 aa17.53■□□□□ 0.4
USF3-203ENST00000491165 CRIP2P52943 208 aaPredicted RBP17.53■□□□□ 0.4
USF3-203ENST00000491165 DMRTA1Q5VZB9 504 aa17.53■□□□□ 0.4
USF3-203ENST00000491165 JMJD8Q96S16 334 aa17.53■□□□□ 0.4
USF3-203ENST00000491165 PSG8Q9UQ74 426 aa17.53■□□□□ 0.4
USF3-203ENST00000491165 HINT1P49773 126 aaPredicted RBP17.53■□□□□ 0.4
USF3-203ENST00000491165 RIGQ13278 110 aa17.53■□□□□ 0.4
USF3-203ENST00000491165 PSG3Q16557 428 aa17.53■□□□□ 0.4
USF3-203ENST00000491165 LINC00173Q6ZV60 143 aa17.53■□□□□ 0.4
USF3-203ENST00000491165 TRAV41A0A0B4J266 112 aa17.51■□□□□ 0.39
USF3-203ENST00000491165 PPIFP30405 207 aaKnown RBP17.51■□□□□ 0.39
USF3-203ENST00000491165 TTC9CQ8N5M4 171 aa17.51■□□□□ 0.39
USF3-203ENST00000491165 ZNF414Q96IQ9 312 aa17.51■□□□□ 0.39
USF3-203ENST00000491165 WI2-2373I1.2A0A1W2PRP0 233 aa17.51■□□□□ 0.39
USF3-203ENST00000491165 MRPS12O15235 138 aaKnown RBP17.51■□□□□ 0.39
USF3-203ENST00000491165 ARMS2P0C7Q2 107 aa17.51■□□□□ 0.39
USF3-203ENST00000491165 FCGR2BP31994 310 aaPredicted RBP17.51■□□□□ 0.39
USF3-203ENST00000491165 S100A7AQ86SG5 101 aa17.51■□□□□ 0.39
USF3-203ENST00000491165 ST20Q9HBF5 79 aa17.51■□□□□ 0.39
USF3-203ENST00000491165 ATRQ13535 2644 aa17.51■□□□□ 0.39
USF3-203ENST00000491165 CFHR3Q02985 330 aa17.5■□□□□ 0.39
USF3-203ENST00000491165 TRAV30A0A087WSZ9 112 aa17.5■□□□□ 0.39
USF3-203ENST00000491165 A0A1B0GW15 77 aa17.5■□□□□ 0.39
USF3-203ENST00000491165 NPIPB5A8MRT5 1133 aa17.5■□□□□ 0.39
USF3-203ENST00000491165 GATD1Q8NB37 220 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms