RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 OR4B1Q8NGF8 309 aa13.75□□□□□ -0.21
MCF2L-230ENST00000491028 FMC1Q96HJ9 113 aa13.75□□□□□ -0.21
MCF2L-230ENST00000491028 ODF3Q96PU9 254 aa13.75□□□□□ -0.21
MCF2L-230ENST00000491028 VGLL1Q99990 258 aa13.75□□□□□ -0.21
MCF2L-230ENST00000491028 AGPAT4-IT1Q9H0P7 198 aa13.75□□□□□ -0.21
MCF2L-230ENST00000491028 PPP1R14DQ9NXH3 145 aa13.75□□□□□ -0.21
MCF2L-230ENST00000491028 KLF12Q9Y4X4 402 aa13.75□□□□□ -0.21
MCF2L-230ENST00000491028 LENEPQ9Y5L5 61 aa13.75□□□□□ -0.21
MCF2L-230ENST00000491028 SRP19P09132 144 aaKnown RBP13.74□□□□□ -0.21
MCF2L-230ENST00000491028 IGHV4-30-4P0DP06 118 aa13.74□□□□□ -0.21
MCF2L-230ENST00000491028 ZNF138P52744 262 aa13.74□□□□□ -0.21
MCF2L-230ENST00000491028 UBE2G1P62253 170 aa13.74□□□□□ -0.21
MCF2L-230ENST00000491028 ERCC8Q13216 396 aa13.74□□□□□ -0.21
MCF2L-230ENST00000491028 TUBA4BQ9H853 241 aa13.74□□□□□ -0.21
MCF2L-230ENST00000491028 ZNF492Q9P255 531 aa13.74□□□□□ -0.21
MCF2L-230ENST00000491028 TRAV8-1A0A0A6YYK1 113 aa13.73□□□□□ -0.21
MCF2L-230ENST00000491028 TRBV7-9A0A0J9YWB2 115 aa13.73□□□□□ -0.21
MCF2L-230ENST00000491028 TRBV6-1A0A0K0K1D8 114 aa13.73□□□□□ -0.21
MCF2L-230ENST00000491028 IGLV2-11P01706 119 aa13.73□□□□□ -0.21
MCF2L-230ENST00000491028 SRSF3P84103 164 aaKnown RBP13.73□□□□□ -0.21
MCF2L-230ENST00000491028 FLI1Q01543 452 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-230ENST00000491028 TMEM183BQ1AE95 376 aa13.73□□□□□ -0.21
MCF2L-230ENST00000491028 UQCC3Q6UW78 93 aa13.73□□□□□ -0.21
MCF2L-230ENST00000491028 COMMD7Q86VX2 200 aa13.73□□□□□ -0.21
MCF2L-230ENST00000491028 EIF4E3Q8N5X7 224 aaKnown RBP13.73□□□□□ -0.21
MCF2L-230ENST00000491028 PSG8Q9UQ74 426 aa13.73□□□□□ -0.21
MCF2L-230ENST00000491028 IGKV3-20P01619 116 aa13.72□□□□□ -0.21
MCF2L-230ENST00000491028 TAS2R60P59551 318 aa13.72□□□□□ -0.21
MCF2L-230ENST00000491028 NUTF2P61970 127 aaKnown RBP13.72□□□□□ -0.21
MCF2L-230ENST00000491028 AMTNQ6UX39 209 aa13.72□□□□□ -0.21
MCF2L-230ENST00000491028 Q86TA4 180 aa13.72□□□□□ -0.21
MCF2L-230ENST00000491028 LINC00479Q96M42 142 aa13.72□□□□□ -0.21
MCF2L-230ENST00000491028 NDFIP1Q9BT67 221 aa13.72□□□□□ -0.21
MCF2L-230ENST00000491028 TREM1Q9NP99 234 aa13.72□□□□□ -0.21
MCF2L-230ENST00000491028 AGRNO00468 2067 aa13.71□□□□□ -0.21
MCF2L-230ENST00000491028 LOC102724200A0A096LPH7 203 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-230ENST00000491028 TRAV34A0A0B4J273 112 aa13.71□□□□□ -0.21
MCF2L-230ENST00000491028 RBMY1BA6NDE4 496 aaKnown RBP13.71□□□□□ -0.21
MCF2L-230ENST00000491028 RBMY1EA6NEQ0 496 aaKnown RBP13.71□□□□□ -0.21
MCF2L-230ENST00000491028 RBMY1DP0C7P1 496 aaKnown RBP13.71□□□□□ -0.21
MCF2L-230ENST00000491028 CT45A10P0DMU9 189 aa13.71□□□□□ -0.21
MCF2L-230ENST00000491028 RPL35P42766 123 aaKnown RBP13.71□□□□□ -0.21
MCF2L-230ENST00000491028 MORN3Q6PF18 240 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-230ENST00000491028 Q8TAT8 98 aa13.71□□□□□ -0.21
MCF2L-230ENST00000491028 FAM19A4Q96LR4 140 aa13.71□□□□□ -0.21
MCF2L-230ENST00000491028 SLC35B3Q9H1N7 401 aa13.71□□□□□ -0.21
MCF2L-230ENST00000491028 K7EIL1 84 aa13.7□□□□□ -0.22
MCF2L-230ENST00000491028 AMBPP02760 352 aa13.7□□□□□ -0.22
MCF2L-230ENST00000491028 TSPOP30536 169 aa13.7□□□□□ -0.22
MCF2L-230ENST00000491028 LEPP41159 167 aa13.7□□□□□ -0.22
MCF2L-230ENST00000491028 PRNTQ86SH4 94 aa13.7□□□□□ -0.22
MCF2L-230ENST00000491028 SGK494Q96LW2 274 aa13.7□□□□□ -0.22
MCF2L-230ENST00000491028 DERL1Q9BUN8 251 aa13.7□□□□□ -0.22
MCF2L-230ENST00000491028 PARLQ9H300 379 aa13.7□□□□□ -0.22
MCF2L-230ENST00000491028 ZFP30Q9Y2G7 519 aa13.7□□□□□ -0.22
MCF2L-230ENST00000491028 DNAH3Q8TD57 4116 aa13.7□□□□□ -0.22
MCF2L-230ENST00000491028 KIR2DL5BA0A0G2JN68 375 aa13.69□□□□□ -0.22
MCF2L-230ENST00000491028 KIR2DL5BA0A0G2JPC4 375 aa13.69□□□□□ -0.22
MCF2L-230ENST00000491028 C9JQL5 133 aa13.69□□□□□ -0.22
MCF2L-230ENST00000491028 PRB2P02812 416 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-230ENST00000491028 CRISP2P16562 243 aa13.69□□□□□ -0.22
MCF2L-230ENST00000491028 RPL35AP18077 110 aaKnown RBP13.69□□□□□ -0.22
MCF2L-230ENST00000491028 SAPCD1Q5SSQ6 148 aa13.69□□□□□ -0.22
MCF2L-230ENST00000491028 LINC00322Q6ZN03 302 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-230ENST00000491028 KIR2DL5AQ8N109 375 aa13.69□□□□□ -0.22
MCF2L-230ENST00000491028 KIR2DL5BQ8NHK3 375 aa13.69□□□□□ -0.22
MCF2L-230ENST00000491028 LTAP01374 205 aa13.68□□□□□ -0.22
MCF2L-230ENST00000491028 CDKN1BP46527 198 aa13.68□□□□□ -0.22
MCF2L-230ENST00000491028 CEBPGP53567 150 aa13.68□□□□□ -0.22
MCF2L-230ENST00000491028 APOC4P55056 127 aa13.68□□□□□ -0.22
MCF2L-230ENST00000491028 IGF2BP2-AS1Q96M15 143 aa13.68□□□□□ -0.22
MCF2L-230ENST00000491028 C1QTNF4Q9BXJ3 329 aa13.68□□□□□ -0.22
MCF2L-230ENST00000491028 NOTCH1P46531 2555 aa13.68□□□□□ -0.22
MCF2L-230ENST00000491028 C9JCJ5 164 aa13.67□□□□□ -0.22
MCF2L-230ENST00000491028 ZNF674Q2M3X9 581 aa13.67□□□□□ -0.22
MCF2L-230ENST00000491028 FAM74A3Q4VXF1 159 aa13.67□□□□□ -0.22
MCF2L-230ENST00000491028 SMIM12Q96EX1 92 aa13.67□□□□□ -0.22
MCF2L-230ENST00000491028 CSTL1Q9H114 145 aa13.67□□□□□ -0.22
MCF2L-230ENST00000491028 KLLNB2CW77 178 aa13.66□□□□□ -0.22
MCF2L-230ENST00000491028 GNG4P50150 75 aa13.66□□□□□ -0.22
MCF2L-230ENST00000491028 NDUFA5Q16718 116 aa13.66□□□□□ -0.22
MCF2L-230ENST00000491028 SPINK13Q1W4C9 94 aa13.66□□□□□ -0.22
MCF2L-230ENST00000491028 CENPWQ5EE01 88 aa13.66□□□□□ -0.22
MCF2L-230ENST00000491028 BAGE2Q86Y30 109 aa13.66□□□□□ -0.22
MCF2L-230ENST00000491028 ZFAND2AQ8N6M9 145 aa13.66□□□□□ -0.22
MCF2L-230ENST00000491028 TVP23CQ96ET8 276 aa13.66□□□□□ -0.22
MCF2L-230ENST00000491028 SMIM7Q9BQ49 75 aa13.66□□□□□ -0.22
MCF2L-230ENST00000491028 TRBV20OR9-2A0A075B6H5 130 aa13.65□□□□□ -0.22
MCF2L-230ENST00000491028 ZNF727A8MUV8 499 aa13.65□□□□□ -0.22
MCF2L-230ENST00000491028 M0R2Z0 102 aa13.65□□□□□ -0.22
MCF2L-230ENST00000491028 SFTA3P0C7M3 94 aa13.65□□□□□ -0.22
MCF2L-230ENST00000491028 FRMD6-AS1P0C7T7 363 aa13.65□□□□□ -0.22
MCF2L-230ENST00000491028 SOHLH1Q5JUK2 328 aa13.65□□□□□ -0.22
MCF2L-230ENST00000491028 COX8CQ7Z4L0 72 aa13.65□□□□□ -0.22
MCF2L-230ENST00000491028 TMEM183AQ8IXX5 376 aa13.65□□□□□ -0.22
MCF2L-230ENST00000491028 UBE2CO00762 179 aa13.64□□□□□ -0.23
MCF2L-230ENST00000491028 CA1P00915 261 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-230ENST00000491028 GPX1P07203 203 aa13.64□□□□□ -0.23
MCF2L-230ENST00000491028 FXYD7P58549 80 aa13.64□□□□□ -0.23
MCF2L-230ENST00000491028 SMUG1Q53HV7 270 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 819.6 ms