RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 TRAV5A0A0B4J249 113 aa9.4□□□□□ -0.9
VARS-227ENST00000489979 K7EP13 123 aa9.4□□□□□ -0.9
VARS-227ENST00000489979 MPDU1O75352 247 aa9.4□□□□□ -0.9
VARS-227ENST00000489979 AP3S2P59780 193 aa9.4□□□□□ -0.9
VARS-227ENST00000489979 GUK1Q16774 197 aa9.4□□□□□ -0.9
VARS-227ENST00000489979 TRIM63Q969Q1 353 aa9.4□□□□□ -0.9
VARS-227ENST00000489979 MGST2Q99735 147 aa9.4□□□□□ -0.9
VARS-227ENST00000489979 VGLL1Q99990 258 aa9.4□□□□□ -0.9
VARS-227ENST00000489979 RBM38Q9H0Z9 239 aaKnown RBP9.4□□□□□ -0.9
VARS-227ENST00000489979 E5RGE8 158 aa9.39□□□□□ -0.91
VARS-227ENST00000489979 K7EQD1 137 aa9.39□□□□□ -0.91
VARS-227ENST00000489979 M0R3E3 92 aa9.39□□□□□ -0.91
VARS-227ENST00000489979 CRYGDP07320 174 aa9.39□□□□□ -0.91
VARS-227ENST00000489979 OR4E1P0C645 316 aa9.39□□□□□ -0.91
VARS-227ENST00000489979 SRIP30626 198 aa9.39□□□□□ -0.91
VARS-227ENST00000489979 SPANXN2Q5MJ10 180 aa9.39□□□□□ -0.91
VARS-227ENST00000489979 IBA57Q5T440 356 aaKnown RBP9.39□□□□□ -0.91
VARS-227ENST00000489979 NTN5Q8WTR8 489 aaPredicted RBP9.39□□□□□ -0.91
VARS-227ENST00000489979 FAM19A4Q96LR4 140 aa9.39□□□□□ -0.91
VARS-227ENST00000489979 MRPL32Q9BYC8 188 aaKnown RBP9.39□□□□□ -0.91
VARS-227ENST00000489979 AGPAT4-IT1Q9H0P7 198 aa9.39□□□□□ -0.91
VARS-227ENST00000489979 DNAJC4Q9NNZ3 241 aa9.39□□□□□ -0.91
VARS-227ENST00000489979 FAM30AQ9NZY2 134 aa9.39□□□□□ -0.91
VARS-227ENST00000489979 FAT3Q8TDW7 4589 aa9.38□□□□□ -0.91
VARS-227ENST00000489979 C9orf170A2RU37 121 aa9.38□□□□□ -0.91
VARS-227ENST00000489979 LRCOL1A6NCL2 159 aa9.38□□□□□ -0.91
VARS-227ENST00000489979 KRTAP29-1A8MX34 341 aaPredicted RBP9.38□□□□□ -0.91
VARS-227ENST00000489979 RGS13O14921 159 aa9.38□□□□□ -0.91
VARS-227ENST00000489979 SCGB1D2O95969 90 aa9.38□□□□□ -0.91
VARS-227ENST00000489979 GPX1P07203 203 aa9.38□□□□□ -0.91
VARS-227ENST00000489979 PYDC2Q56P42 97 aa9.38□□□□□ -0.91
VARS-227ENST00000489979 Q6ZQT7 251 aa9.38□□□□□ -0.91
VARS-227ENST00000489979 MRPL53Q96EL3 112 aaKnown RBP9.38□□□□□ -0.91
VARS-227ENST00000489979 LINC00477Q96M19 166 aa9.38□□□□□ -0.91
VARS-227ENST00000489979 GGACTQ9BVM4 153 aa9.38□□□□□ -0.91
VARS-227ENST00000489979 IGHV1OR15-1A0A075B7D0 117 aa9.37□□□□□ -0.91
VARS-227ENST00000489979 TRGV4A0A0C4DH28 118 aa9.37□□□□□ -0.91
VARS-227ENST00000489979 PSCAO43653 123 aa9.37□□□□□ -0.91
VARS-227ENST00000489979 TSC22D2O75157 780 aa9.37□□□□□ -0.91
VARS-227ENST00000489979 ZNF253O75346 499 aa9.37□□□□□ -0.91
VARS-227ENST00000489979 UBE2MP61081 183 aaKnown RBP9.37□□□□□ -0.91
VARS-227ENST00000489979 PRR9Q5T870 116 aa9.37□□□□□ -0.91
VARS-227ENST00000489979 MIC13Q5XKP0 118 aa9.37□□□□□ -0.91
VARS-227ENST00000489979 Q6ZRG5 221 aa9.37□□□□□ -0.91
VARS-227ENST00000489979 C10orf126Q8N4M7 172 aa9.37□□□□□ -0.91
VARS-227ENST00000489979 ARPC5LQ9BPX5 153 aa9.37□□□□□ -0.91
VARS-227ENST00000489979 TRBV19A0A075B6N1 114 aa9.36□□□□□ -0.91
VARS-227ENST00000489979 SFTA3P0C7M3 94 aa9.36□□□□□ -0.91
VARS-227ENST00000489979 GYPEP15421 78 aa9.36□□□□□ -0.91
VARS-227ENST00000489979 CRISP2P16562 243 aa9.36□□□□□ -0.91
VARS-227ENST00000489979 CAMLGP49069 296 aa9.36□□□□□ -0.91
VARS-227ENST00000489979 INPP1P49441 399 aa9.36□□□□□ -0.91
VARS-227ENST00000489979 TAS2R30P59541 319 aa9.36□□□□□ -0.91
VARS-227ENST00000489979 ZNF415Q09FC8 603 aa9.36□□□□□ -0.91
VARS-227ENST00000489979 OR1L4Q8NGR5 311 aa9.36□□□□□ -0.91
VARS-227ENST00000489979 PCNPQ8WW12 178 aaKnown RBP9.36□□□□□ -0.91
VARS-227ENST00000489979 RCL1Q9Y2P8 373 aaKnown RBP9.36□□□□□ -0.91
VARS-227ENST00000489979 NDUFB4O95168 129 aa9.35□□□□□ -0.91
VARS-227ENST00000489979 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
VARS-227ENST00000489979 IAH1Q2TAA2 248 aaPredicted RBP9.35□□□□□ -0.91
VARS-227ENST00000489979 C9orf47Q6ZRZ4 202 aa9.35□□□□□ -0.91
VARS-227ENST00000489979 NRARPQ7Z6K4 114 aa9.35□□□□□ -0.91
VARS-227ENST00000489979 ZFAND2AQ8N6M9 145 aa9.35□□□□□ -0.91
VARS-227ENST00000489979 Q8N814 137 aa9.35□□□□□ -0.91
VARS-227ENST00000489979 ZNF479Q96JC4 524 aa9.35□□□□□ -0.91
VARS-227ENST00000489979 IGKV2-40A0A087WW87 121 aaPredicted RBP9.34□□□□□ -0.91
VARS-227ENST00000489979 IGKV2D-40P01614 121 aaPredicted RBP9.34□□□□□ -0.91
VARS-227ENST00000489979 NMBP08949 121 aa9.34□□□□□ -0.91
VARS-227ENST00000489979 RAB31Q13636 194 aa9.34□□□□□ -0.91
VARS-227ENST00000489979 IQCF2Q8IXL9 164 aa9.34□□□□□ -0.91
VARS-227ENST00000489979 EXOC3-AS1Q8N2X6 119 aa9.34□□□□□ -0.91
VARS-227ENST00000489979 DEDD2Q8WXF8 326 aa9.34□□□□□ -0.91
VARS-227ENST00000489979 PFDN5Q99471 154 aa9.34□□□□□ -0.91
VARS-227ENST00000489979 BATF3Q9NR55 127 aa9.34□□□□□ -0.91
VARS-227ENST00000489979 GSKIPQ9P0R6 139 aa9.34□□□□□ -0.91
VARS-227ENST00000489979 PRELID1Q9Y255 219 aa9.34□□□□□ -0.91
VARS-227ENST00000489979 TIMM9Q9Y5J7 89 aa9.34□□□□□ -0.91
VARS-227ENST00000489979 C7orf66A4D0T2 115 aa9.33□□□□□ -0.92
VARS-227ENST00000489979 ORM1P02763 201 aa9.33□□□□□ -0.92
VARS-227ENST00000489979 TMEM78Q5T7P6 136 aa9.33□□□□□ -0.92
VARS-227ENST00000489979 SERTAD4-AS1Q5TG53 156 aa9.33□□□□□ -0.92
VARS-227ENST00000489979 LINC00528Q8N1L1 170 aa9.33□□□□□ -0.92
VARS-227ENST00000489979 C12orf45Q8N5I9 185 aaPredicted RBP9.33□□□□□ -0.92
VARS-227ENST00000489979 DEFB104AQ8WTQ1 72 aa9.33□□□□□ -0.92
VARS-227ENST00000489979 BLNKQ8WV28 456 aa9.33□□□□□ -0.92
VARS-227ENST00000489979 TXNDC17Q9BRA2 123 aa9.33□□□□□ -0.92
VARS-227ENST00000489979 FLVCR2Q9UPI3 526 aa9.33□□□□□ -0.92
VARS-227ENST00000489979 V9GYH0 126 aa9.33□□□□□ -0.92
VARS-227ENST00000489979 MBPP02686 304 aaPredicted RBP9.32□□□□□ -0.92
VARS-227ENST00000489979 C1QBP02746 253 aa9.32□□□□□ -0.92
VARS-227ENST00000489979 PYYP10082 97 aa9.32□□□□□ -0.92
VARS-227ENST00000489979 HIST1H1EP10412 219 aaKnown RBP9.32□□□□□ -0.92
VARS-227ENST00000489979 PDE6HQ13956 83 aa9.32□□□□□ -0.92
VARS-227ENST00000489979 TRIQKQ629K1 86 aa9.32□□□□□ -0.92
VARS-227ENST00000489979 SYT8Q8NBV8 401 aa9.32□□□□□ -0.92
VARS-227ENST00000489979 OR10G4Q8NGN3 311 aa9.32□□□□□ -0.92
VARS-227ENST00000489979 SRRQ9GZT4 340 aa9.32□□□□□ -0.92
VARS-227ENST00000489979 TMEM14CQ9P0S9 112 aa9.32□□□□□ -0.92
VARS-227ENST00000489979 ZNF492Q9P255 531 aa9.32□□□□□ -0.92
VARS-227ENST00000489979 IGHV3-38A0A0C4DH36 116 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms