RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 C5orf64Q2M2E5 130 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 CFHR4Q92496 578 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 SLC50A1Q9BRV3 221 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 Q9UFV3 132 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 A0A087WX48 190 aa11.14□□□□□ -0.63
NR1H3-220ENST00000481020 IGKV2D-26A0A0A0MRZ7 120 aa11.14□□□□□ -0.63
NR1H3-220ENST00000481020 IGLL5B9A064 214 aa11.14□□□□□ -0.63
NR1H3-220ENST00000481020 SMKR1H3BMG3 65 aa11.14□□□□□ -0.63
NR1H3-220ENST00000481020 ORM1P02763 201 aa11.14□□□□□ -0.63
NR1H3-220ENST00000481020 LAGE3Q14657 143 aa11.14□□□□□ -0.63
NR1H3-220ENST00000481020 KLK9Q2XQG4 91 aa11.14□□□□□ -0.63
NR1H3-220ENST00000481020 ZC2HC1BQ5TFG8 222 aa11.14□□□□□ -0.63
NR1H3-220ENST00000481020 SPANXB1Q9NS25 103 aaPredicted RBP11.14□□□□□ -0.63
NR1H3-220ENST00000481020 KLK9Q9UKQ9 250 aa11.14□□□□□ -0.63
NR1H3-220ENST00000481020 NCBP2LA6PVI3 153 aaKnown RBP11.13□□□□□ -0.63
NR1H3-220ENST00000481020 F8W735 103 aaPredicted RBP11.13□□□□□ -0.63
NR1H3-220ENST00000481020 SLC25A16P16260 332 aa11.13□□□□□ -0.63
NR1H3-220ENST00000481020 ZNF80P51504 273 aaPredicted RBP11.13□□□□□ -0.63
NR1H3-220ENST00000481020 CCDC144NLQ6NUI1 221 aa11.13□□□□□ -0.63
NR1H3-220ENST00000481020 ZNF575Q86XF7 245 aa11.13□□□□□ -0.63
NR1H3-220ENST00000481020 TMEM158Q8WZ71 300 aa11.13□□□□□ -0.63
NR1H3-220ENST00000481020 ZNF479Q96JC4 524 aa11.13□□□□□ -0.63
NR1H3-220ENST00000481020 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
NR1H3-220ENST00000481020 FOXC2Q99958 501 aa11.13□□□□□ -0.63
NR1H3-220ENST00000481020 NAA38Q9BRA0 125 aaKnown RBP11.13□□□□□ -0.63
NR1H3-220ENST00000481020 A0A1B0GV72 72 aa11.12□□□□□ -0.63
NR1H3-220ENST00000481020 TMEM8BA6NDV4 472 aa11.12□□□□□ -0.63
NR1H3-220ENST00000481020 E7EQL1 145 aa11.12□□□□□ -0.63
NR1H3-220ENST00000481020 M0R1W7 72 aa11.12□□□□□ -0.63
NR1H3-220ENST00000481020 COX7A1P24310 79 aa11.12□□□□□ -0.63
NR1H3-220ENST00000481020 MRAP2Q96G30 205 aa11.12□□□□□ -0.63
NR1H3-220ENST00000481020 NHP2Q9NX24 153 aaKnown RBP11.12□□□□□ -0.63
NR1H3-220ENST00000481020 CADP27708 2225 aa11.12□□□□□ -0.63
NR1H3-220ENST00000481020 GAGE12HA6NDE8 117 aa11.12□□□□□ -0.63
NR1H3-220ENST00000481020 DTX2Q86UW9 622 aa11.12□□□□□ -0.63
NR1H3-220ENST00000481020 FREM2Q5SZK8 3169 aa11.12□□□□□ -0.63
NR1H3-220ENST00000481020 ZFHX2Q9C0A1 2572 aaPredicted RBP11.11□□□□□ -0.63
NR1H3-220ENST00000481020 IGHG4P01861 327 aa11.11□□□□□ -0.63
NR1H3-220ENST00000481020 TMEM11P17152 192 aa11.11□□□□□ -0.63
NR1H3-220ENST00000481020 FXYD7P58549 80 aa11.11□□□□□ -0.63
NR1H3-220ENST00000481020 C12orf74Q32Q52 190 aa11.11□□□□□ -0.63
NR1H3-220ENST00000481020 ATP6V0E2Q8NHE4 81 aa11.11□□□□□ -0.63
NR1H3-220ENST00000481020 LINC01549A6NIU2 74 aa11.1□□□□□ -0.63
NR1H3-220ENST00000481020 AZU1P20160 251 aa11.1□□□□□ -0.63
NR1H3-220ENST00000481020 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
NR1H3-220ENST00000481020 LCNL1Q6ZST4 164 aa11.1□□□□□ -0.63
NR1H3-220ENST00000481020 SMAD5-AS1Q9Y6J3 95 aa11.1□□□□□ -0.63
NR1H3-220ENST00000481020 ZNF292O60281 2723 aa11.1□□□□□ -0.63
NR1H3-220ENST00000481020 RIF1Q5UIP0 2472 aaKnown RBP11.1□□□□□ -0.63
NR1H3-220ENST00000481020 ODF3BA8MYP8 253 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 H7C1H1 209 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 CTSGP08311 255 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 EBI3Q14213 229 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 GTSCR1Q86UQ5 136 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 MTURNQ8N3F0 131 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 LENEPQ9Y5L5 61 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 TMEM238LA0A1B0GVL6 79 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 A6NJY4 79 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 F8VRH5 84 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.09□□□□□ -0.63
NR1H3-220ENST00000481020 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 ORMDL2Q53FV1 153 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 C1orf122Q6ZSJ8 110 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 NRACQ8N912 160 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 Q8TAT8 98 aa11.09□□□□□ -0.63
NR1H3-220ENST00000481020 MRPL35Q9NZE8 188 aaKnown RBP11.09□□□□□ -0.63
NR1H3-220ENST00000481020 CD3EP07766 207 aa11.08□□□□□ -0.64
NR1H3-220ENST00000481020 TM4SF20Q53R12 229 aa11.08□□□□□ -0.64
NR1H3-220ENST00000481020 TCTEX1D4Q5JR98 221 aa11.08□□□□□ -0.64
NR1H3-220ENST00000481020 VCX2Q9H322 139 aa11.08□□□□□ -0.64
NR1H3-220ENST00000481020 TMEM160Q9NX00 188 aa11.08□□□□□ -0.64
NR1H3-220ENST00000481020 MSRB1Q9NZV6 116 aa11.08□□□□□ -0.64
NR1H3-220ENST00000481020 GVINP1Q7Z2Y8 2422 aa11.08□□□□□ -0.64
NR1H3-220ENST00000481020 TRBV7-3A0A075B6L6 115 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 TRAV40A0A0B4J280 105 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 PRTN3P24158 256 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 MINOS1Q5TGZ0 78 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 LYRM7Q5U5X0 104 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 WFDC3Q8IUB2 231 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 Q8N6K4 173 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 ATP6V0BQ99437 205 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 HIST1H4GQ99525 98 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 C20orf78Q9BR46 151 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 ONECUT1Q9UBC0 465 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 MINOS1-NBL1R4GNA1 71 aa11.07□□□□□ -0.64
NR1H3-220ENST00000481020 MYMXA0A1B0GTQ4 84 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 OR11H12B2RN74 326 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 K7ERJ3 54 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 PPP1R17O96001 155 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 DYNAPQ8N1N2 210 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 OR11H1Q8NG94 326 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 OR11H2Q8NH07 326 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 PLCE1Q9P212 2302 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 FRYQ5TBA9 3013 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 CNOT1A5YKK6 2376 aaKnown RBP11.06□□□□□ -0.64
NR1H3-220ENST00000481020 CENPVL3A0A0U1RRI6 287 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 BUB3O43684 328 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 GOSR1O95249 250 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 TCTAP57738 103 aa11.06□□□□□ -0.64
NR1H3-220ENST00000481020 PRO0461Q9UI25 63 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms