RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 APCP25054 2843 aa9.41□□□□□ -0.9
PTPRF-212ENST00000477970 CELSR2Q9HCU4 2923 aa9.4□□□□□ -0.9
PTPRF-212ENST00000477970 NTF3P20783 257 aa9.4□□□□□ -0.9
PTPRF-212ENST00000477970 TDRG1Q3Y452 100 aa9.4□□□□□ -0.9
PTPRF-212ENST00000477970 BEX4Q9NWD9 120 aaPredicted RBP9.4□□□□□ -0.9
PTPRF-212ENST00000477970 PPIFP30405 207 aaKnown RBP9.4□□□□□ -0.9
PTPRF-212ENST00000477970 ATP5J2P56134 94 aa9.4□□□□□ -0.9
PTPRF-212ENST00000477970 LINC01559Q495D7 138 aa9.4□□□□□ -0.9
PTPRF-212ENST00000477970 VGLL1Q99990 258 aa9.4□□□□□ -0.9
PTPRF-212ENST00000477970 IGHV4-30-2A0A087WSY4 118 aa9.39□□□□□ -0.91
PTPRF-212ENST00000477970 EBLN2Q6P2I7 272 aa9.39□□□□□ -0.91
PTPRF-212ENST00000477970 LRRC75A-AS1Q8N1F1 130 aa9.39□□□□□ -0.91
PTPRF-212ENST00000477970 IGHV1-24A0A0C4DH33 117 aa9.39□□□□□ -0.91
PTPRF-212ENST00000477970 M0R143 59 aa9.39□□□□□ -0.91
PTPRF-212ENST00000477970 NDUFA4O00483 81 aa9.39□□□□□ -0.91
PTPRF-212ENST00000477970 SLC25A16P16260 332 aa9.39□□□□□ -0.91
PTPRF-212ENST00000477970 LYZL1Q6UWQ5 148 aa9.39□□□□□ -0.91
PTPRF-212ENST00000477970 TMEM219Q86XT9 240 aa9.39□□□□□ -0.91
PTPRF-212ENST00000477970 TRAV8-2A0A0B4J237 113 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 B4DSR2 109 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 IGHV4-38-2P0DP08 117 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 ZNF575Q86XF7 245 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 ASCL2Q99929 193 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 PAM16Q9Y3D7 125 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 CRYBG3Q68DQ2 2970 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 FABP5P3A8MUU1 101 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 FAM104BQ5XKR9 115 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 C9orf47Q6ZRZ4 202 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 KLHDC1Q8N7A1 406 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 GLMPQ8WWB7 406 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 TMEM70Q9BUB7 260 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 FLNBO75369 2602 aaKnown RBP9.38□□□□□ -0.91
PTPRF-212ENST00000477970 ZNF80P51504 273 aaPredicted RBP9.38□□□□□ -0.91
PTPRF-212ENST00000477970 HIST1H1AQ02539 215 aaPredicted RBP9.38□□□□□ -0.91
PTPRF-212ENST00000477970 SNHG12Q9BXW3 62 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 LENEPQ9Y5L5 61 aa9.38□□□□□ -0.91
PTPRF-212ENST00000477970 TRGV3P03979 118 aa9.37□□□□□ -0.91
PTPRF-212ENST00000477970 HLA-DMBP28068 263 aa9.37□□□□□ -0.91
PTPRF-212ENST00000477970 SPATA45Q537H7 98 aa9.37□□□□□ -0.91
PTPRF-212ENST00000477970 BRD3OSQ6XYD6 125 aa9.37□□□□□ -0.91
PTPRF-212ENST00000477970 ABCA2Q9BZC7 2435 aa9.37□□□□□ -0.91
PTPRF-212ENST00000477970 C9orf139Q6ZV77 190 aa9.37□□□□□ -0.91
PTPRF-212ENST00000477970 FER1L6-AS1Q8NA97 138 aa9.37□□□□□ -0.91
PTPRF-212ENST00000477970 NPFFR1Q9GZQ6 430 aa9.37□□□□□ -0.91
PTPRF-212ENST00000477970 EREGO14944 169 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 IGLV1-40P01703 118 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 ARL3P36405 182 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 CFHR3Q02985 330 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 C8orf86Q6ZUL3 223 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 UQCR10Q9UDW1 63 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 TRAV9-2A0A087WT02 112 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 ITPR2Q14571 2701 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 J3QLI3 93 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 LEPROTL1O95214 131 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 IGLC3P0DOY3 106 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 C21orf62-AS1Q17RA5 79 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 DEFB113Q30KQ7 82 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 Q8TAT8 98 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 TMEM191AQ9H0A3 160 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 HSPB8Q9UJY1 196 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 AKAP9Q99996 3911 aa9.36□□□□□ -0.91
PTPRF-212ENST00000477970 IGHV3OR16-10A0A075B7F0 116 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 PRAC2D3DTV9 90 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 H3BUX3 64 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 ZNF138P52744 262 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 PET117Q6UWS5 81 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 A0A096LNT2 108 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 IGHV3-35A0A0C4DH35 117 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 LINC01546A6NGU7 62 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 SYS1-DBNDD2H3BUS1 97 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 PRSS57Q6UWY2 283 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 SPATA12Q7Z6I5 190 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 LAMTOR2Q9Y2Q5 125 aa9.35□□□□□ -0.91
PTPRF-212ENST00000477970 SSTP61278 116 aa9.34□□□□□ -0.91
PTPRF-212ENST00000477970 NUTF2P61970 127 aaKnown RBP9.34□□□□□ -0.91
PTPRF-212ENST00000477970 ORMDL3Q8N138 153 aa9.34□□□□□ -0.91
PTPRF-212ENST00000477970 SVIPQ8NHG7 77 aa9.34□□□□□ -0.91
PTPRF-212ENST00000477970 ANKRD17O75179 2603 aaKnown RBP9.34□□□□□ -0.91
PTPRF-212ENST00000477970 A0A0G2JLM5 398 aa9.34□□□□□ -0.91
PTPRF-212ENST00000477970 A0A1B0GV90 55 aa9.34□□□□□ -0.91
PTPRF-212ENST00000477970 TMEM89A2RUT3 159 aa9.34□□□□□ -0.91
PTPRF-212ENST00000477970 IGFL4Q6B9Z1 124 aa9.34□□□□□ -0.91
PTPRF-212ENST00000477970 ZNF705AQ6ZN79 300 aaPredicted RBP9.34□□□□□ -0.91
PTPRF-212ENST00000477970 AGPAT4-IT1Q9H0P7 198 aa9.34□□□□□ -0.91
PTPRF-212ENST00000477970 IGHV3OR16-8A0A075B7F1 116 aa9.34□□□□□ -0.91
PTPRF-212ENST00000477970 AP5S1Q9NUS5 200 aa9.34□□□□□ -0.91
PTPRF-212ENST00000477970 SOCS3O14543 225 aa9.33□□□□□ -0.92
PTPRF-212ENST00000477970 PPBPP02775 128 aa9.33□□□□□ -0.92
PTPRF-212ENST00000477970 ERCC8Q13216 396 aa9.33□□□□□ -0.92
PTPRF-212ENST00000477970 TMEM78Q5T7P6 136 aa9.33□□□□□ -0.92
PTPRF-212ENST00000477970 RNF182Q8N6D2 247 aa9.33□□□□□ -0.92
PTPRF-212ENST00000477970 LINC01356Q8N9X3 169 aa9.33□□□□□ -0.92
PTPRF-212ENST00000477970 TMEM213A2RRL7 107 aa9.33□□□□□ -0.92
PTPRF-212ENST00000477970 MRPL51Q4U2R6 128 aaKnown RBP9.33□□□□□ -0.92
PTPRF-212ENST00000477970 PRRC2AP48634 2157 aaKnown RBP9.33□□□□□ -0.92
PTPRF-212ENST00000477970 TRBV7-9A0A0J9YWB2 115 aa9.33□□□□□ -0.92
PTPRF-212ENST00000477970 M0QZ24 198 aa9.33□□□□□ -0.92
PTPRF-212ENST00000477970 IL17RELQ6ZVW7 336 aa9.33□□□□□ -0.92
PTPRF-212ENST00000477970 MAP1LC3CQ9BXW4 147 aa9.33□□□□□ -0.92
PTPRF-212ENST00000477970 ABCA1O95477 2261 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms