RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 MLANAQ16655 118 aa10.77□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 HEPN1Q6WQI6 88 aa10.77□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 AMN1Q8IY45 258 aa10.77□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 NABP1Q96AH0 204 aa10.77□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 TM2D2Q9BX73 214 aa10.77□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 FNDC1Q4ZHG4 1894 aaPredicted RBP10.77□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 A0A0J9YY99 117 aa10.77□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 SLC25A48Q6ZT89 311 aaKnown RBP10.77□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 SEM1Q6ZVN7 128 aa10.76□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 CEP192Q8TEP8 1941 aa10.76□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 EFNA2O43921 213 aa10.76□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 TINCRA0A1B0GVN0 87 aa10.76□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 UBE2E1P51965 193 aa10.76□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 CCL18P55774 89 aa10.76□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 TREML4Q6UXN2 200 aa10.76□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 OBSL1O75147 1896 aa10.76□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 MP68P56378 58 aa10.76□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 IGKV1-39P01597 117 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 IGKV1D-39P04432 117 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 CD177Q8N6Q3 437 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 SIGLEC9Q9Y336 463 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 C9orf47Q6ZRZ4 202 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 IGKV1D-8A0A087WSZ0 117 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 RNF126Q9BV68 326 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 SBF2Q86WG5 1849 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 IGHV4OR15-8A0A075B7B6 117 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 A0A087WW49 117 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 LMO1P25800 156 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 RNASE13Q5GAN3 156 aaKnown RBP10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 VWCEQ96DN2 955 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 KLK5Q9Y337 293 aaPredicted RBP10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 FAM90A2PQ658T7 463 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 OR11H6Q8NGC7 330 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 ATP6V0BQ99437 205 aa10.75□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 RFNGQ9Y644 331 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 ZFYVE26Q68DK2 2539 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 IGLL5B9A064 214 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 ARMS2P0C7Q2 107 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 ZFP36L1Q07352 338 aaKnown RBP10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 CR1LQ2VPA4 569 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 LINC01549A6NIU2 74 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 SRRM5B3KS81 715 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 IGHG2P01859 326 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 NUP35Q8NFH5 326 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 ZNRF2Q8NHG8 242 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 H0YJW9 148 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 CRYGCP07315 174 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 C9orf139Q6ZV77 190 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 RS1O15537 224 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 MORN5Q5VZ52 161 aa10.74□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 LINC01619G3V211 115 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 G3V318 75 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 LINC00479Q96M42 142 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 E7EQL1 145 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 FAM223BA6NKX1 122 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 LINC00271P0C7V0 271 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 HSD52Q0P140 79 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 FAM223AQ8IWN6 122 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 RPP25LQ8N5L8 163 aaKnown RBP10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 LY6G5BQ8NDX9 201 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 IL18BPO95998 194 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 IGKV1-16P04430 117 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 J3QKU1 62 aa10.73□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 TRAV9-1A0A075B6T8 112 aa10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 MST1LQ2TV78 715 aa10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 AGMATQ9BSE5 352 aa10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 NDUFC2O95298 119 aa10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 RNASE2P10153 161 aaKnown RBP10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 SPTSSBQ8NFR3 76 aa10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 TMEM243Q9BU79 118 aa10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 ATP6V0E1O15342 81 aa10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 GGNQ86UU5 652 aa10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 IGKV1D-12P01611 117 aa10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 ACYP1P07311 99 aa10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 TNS1Q9HBL0 1735 aaKnown RBP10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 M0R1W7 72 aa10.72□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 GTSF1Q8WW33 167 aa10.71□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 IGFBPL1Q8WX77 278 aa10.71□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 A0A087WWC5 75 aa10.71□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 A0A1B0GX51 115 aa10.71□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 RNF222A6NCQ9 220 aa10.71□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 GLRX5Q86SX6 157 aa10.71□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 DYNAPQ8N1N2 210 aa10.71□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 TRGV9Q99603 122 aa10.71□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 SPINK8P0C7L1 97 aa10.71□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 TRPT1Q86TN4 253 aaKnown RBP10.71□□□□□ -0.69
NPHP3-ACAD11-201ENST00000471702 IGKV1-12A0A0C4DH73 117 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 XCL1P47992 114 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 MPLKIPQ8TAP9 179 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 ZC2HC1BQ5TFG8 222 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 FBLIM1Q8WUP2 373 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 WFDC1Q9HC57 220 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 UBE2D4Q9Y2X8 147 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 HIST1H2BKO60814 126 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 HIST1H2BJP06899 126 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 HIST1H2BOP23527 126 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 HIST1H2BBP33778 126 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 HIST1H2BDP58876 126 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 HIST1H2BCP62807 126 aa10.71□□□□□ -0.7
NPHP3-ACAD11-201ENST00000471702 HIST2H2BEQ16778 126 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms