RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 GFI1BQ5VTD9 330 aa14.22□□□□□ -0.13
HDAC7-220ENST00000471235 IQCF2Q8IXL9 164 aa14.22□□□□□ -0.13
HDAC7-220ENST00000471235 FAM19A4Q96LR4 140 aa14.22□□□□□ -0.13
HDAC7-220ENST00000471235 LINC00477Q96M19 166 aa14.22□□□□□ -0.13
HDAC7-220ENST00000471235 RBAKDNA6NC62 111 aa14.21□□□□□ -0.13
HDAC7-220ENST00000471235 MAP1LC3B2A6NCE7 125 aa14.21□□□□□ -0.13
HDAC7-220ENST00000471235 DIRC3C9JPN6 131 aa14.21□□□□□ -0.13
HDAC7-220ENST00000471235 J3KRW8 73 aa14.21□□□□□ -0.13
HDAC7-220ENST00000471235 HBE1P02100 147 aa14.21□□□□□ -0.13
HDAC7-220ENST00000471235 FGF8P55075 233 aaPredicted RBP14.21□□□□□ -0.13
HDAC7-220ENST00000471235 PMS2P11Q13670 270 aa14.21□□□□□ -0.13
HDAC7-220ENST00000471235 FAM74A1Q5RGS3 127 aa14.21□□□□□ -0.13
HDAC7-220ENST00000471235 TMEM78Q5T7P6 136 aa14.21□□□□□ -0.13
HDAC7-220ENST00000471235 RXFP4Q8TDU9 374 aa14.21□□□□□ -0.13
HDAC7-220ENST00000471235 MAP1LC3BQ9GZQ8 125 aa14.21□□□□□ -0.13
HDAC7-220ENST00000471235 RPH3ALQ9UNE2 315 aa14.21□□□□□ -0.13
HDAC7-220ENST00000471235 SLC25A5P05141 298 aaKnown RBP14.2□□□□□ -0.14
HDAC7-220ENST00000471235 FHITP49789 147 aa14.2□□□□□ -0.14
HDAC7-220ENST00000471235 NANOS2P60321 138 aaKnown RBP14.2□□□□□ -0.14
HDAC7-220ENST00000471235 TMEM256Q8N2U0 113 aa14.2□□□□□ -0.14
HDAC7-220ENST00000471235 C9orf62Q8N4C0 152 aa14.2□□□□□ -0.14
HDAC7-220ENST00000471235 Q8TAT8 98 aa14.2□□□□□ -0.14
HDAC7-220ENST00000471235 C11orf45Q8TAV5 145 aa14.2□□□□□ -0.14
HDAC7-220ENST00000471235 CMTM2Q8TAZ6 248 aa14.2□□□□□ -0.14
HDAC7-220ENST00000471235 TMED6Q8WW62 240 aa14.2□□□□□ -0.14
HDAC7-220ENST00000471235 ZNF492Q9P255 531 aa14.2□□□□□ -0.14
HDAC7-220ENST00000471235 CELA1Q9UNI1 258 aa14.2□□□□□ -0.14
HDAC7-220ENST00000471235 LOC102723971A0A1B0GUV8 181 aa14.19□□□□□ -0.14
HDAC7-220ENST00000471235 CXorf65A6NEN9 183 aa14.19□□□□□ -0.14
HDAC7-220ENST00000471235 ZNF705GA8MUZ8 300 aaPredicted RBP14.19□□□□□ -0.14
HDAC7-220ENST00000471235 GGTLC3B5MD39 225 aa14.19□□□□□ -0.14
HDAC7-220ENST00000471235 UMAD1C9J7I0 102 aa14.19□□□□□ -0.14
HDAC7-220ENST00000471235 CRISP2P16562 243 aa14.19□□□□□ -0.14
HDAC7-220ENST00000471235 GNG5P63218 68 aa14.19□□□□□ -0.14
HDAC7-220ENST00000471235 RRN3P1Q2M238 152 aa14.19□□□□□ -0.14
HDAC7-220ENST00000471235 ZFP69Q49AA0 526 aa14.19□□□□□ -0.14
HDAC7-220ENST00000471235 C20orf144Q9BQM9 153 aa14.19□□□□□ -0.14
HDAC7-220ENST00000471235 TMPRSS5Q9H3S3 457 aa14.19□□□□□ -0.14
HDAC7-220ENST00000471235 KLLNB2CW77 178 aa14.18□□□□□ -0.14
HDAC7-220ENST00000471235 PRM2P04554 102 aa14.18□□□□□ -0.14
HDAC7-220ENST00000471235 ZNF138P52744 262 aa14.18□□□□□ -0.14
HDAC7-220ENST00000471235 GOLT1AQ6ZVE7 132 aa14.18□□□□□ -0.14
HDAC7-220ENST00000471235 ARL6IP6Q8N6S5 226 aa14.18□□□□□ -0.14
HDAC7-220ENST00000471235 FAM213BQ8TBF2 198 aa14.18□□□□□ -0.14
HDAC7-220ENST00000471235 C7orf71A4D174 169 aa14.17□□□□□ -0.14
HDAC7-220ENST00000471235 TMEM189A5PLL7 270 aa14.17□□□□□ -0.14
HDAC7-220ENST00000471235 EMP1P54849 157 aa14.17□□□□□ -0.14
HDAC7-220ENST00000471235 BTN1A1Q13410 526 aa14.17□□□□□ -0.14
HDAC7-220ENST00000471235 PRR9Q5T870 116 aa14.17□□□□□ -0.14
HDAC7-220ENST00000471235 ZFAND2AQ8N6M9 145 aa14.17□□□□□ -0.14
HDAC7-220ENST00000471235 C5orf17Q8NAS9 161 aa14.17□□□□□ -0.14
HDAC7-220ENST00000471235 LINC01587Q99440 93 aa14.17□□□□□ -0.14
HDAC7-220ENST00000471235 TRAV12-3A0A0B4J271 114 aa14.16□□□□□ -0.14
HDAC7-220ENST00000471235 A0A1W2PRE2 83 aa14.16□□□□□ -0.14
HDAC7-220ENST00000471235 DPPA3Q6W0C5 159 aa14.16□□□□□ -0.14
HDAC7-220ENST00000471235 YTHDF2Q9Y5A9 579 aaKnown RBP14.16□□□□□ -0.14
HDAC7-220ENST00000471235 TRBV7-9A0A0J9YWB2 115 aa14.15□□□□□ -0.14
HDAC7-220ENST00000471235 H7BYZ3 331 aa14.15□□□□□ -0.14
HDAC7-220ENST00000471235 NMBP08949 121 aa14.15□□□□□ -0.14
HDAC7-220ENST00000471235 TAS2R60P59551 318 aa14.15□□□□□ -0.14
HDAC7-220ENST00000471235 UBE2G2P60604 165 aa14.15□□□□□ -0.14
HDAC7-220ENST00000471235 SLC51BQ86UW2 128 aa14.15□□□□□ -0.14
HDAC7-220ENST00000471235 TCRAP04437 139 aa14.14□□□□□ -0.15
HDAC7-220ENST00000471235 AZU1P20160 251 aa14.14□□□□□ -0.15
HDAC7-220ENST00000471235 SUMO1P63165 101 aaKnown RBP14.14□□□□□ -0.15
HDAC7-220ENST00000471235 PHLDA1Q8WV24 401 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-220ENST00000471235 MBD3L1Q8WWY6 194 aa14.14□□□□□ -0.15
HDAC7-220ENST00000471235 NIPSNAP3BQ9BS92 247 aa14.14□□□□□ -0.15
HDAC7-220ENST00000471235 TRAV8-1A0A0A6YYK1 113 aa14.13□□□□□ -0.15
HDAC7-220ENST00000471235 SERTM2A0A1B0GWG4 89 aa14.13□□□□□ -0.15
HDAC7-220ENST00000471235 PLAC8L1A1L4L8 177 aa14.13□□□□□ -0.15
HDAC7-220ENST00000471235 NUPR2A6NF83 97 aa14.13□□□□□ -0.15
HDAC7-220ENST00000471235 FAM74A7A6NL05 159 aa14.13□□□□□ -0.15
HDAC7-220ENST00000471235 GPX1P07203 203 aa14.13□□□□□ -0.15
HDAC7-220ENST00000471235 RNASE4P34096 147 aaKnown RBP14.13□□□□□ -0.15
HDAC7-220ENST00000471235 FAM222AQ5U5X8 452 aa14.13□□□□□ -0.15
HDAC7-220ENST00000471235 ZNF767PQ75MW2 155 aa14.13□□□□□ -0.15
HDAC7-220ENST00000471235 DKK2Q9UBU2 259 aa14.13□□□□□ -0.15
HDAC7-220ENST00000471235 LENEPQ9Y5L5 61 aa14.13□□□□□ -0.15
HDAC7-220ENST00000471235 HTN1P15515 57 aa14.12□□□□□ -0.15
HDAC7-220ENST00000471235 C12orf74Q32Q52 190 aa14.12□□□□□ -0.15
HDAC7-220ENST00000471235 EIF5AL1Q6IS14 154 aaKnown RBP14.12□□□□□ -0.15
HDAC7-220ENST00000471235 CEMP1Q6PRD7 247 aaPredicted RBP14.12□□□□□ -0.15
HDAC7-220ENST00000471235 Q6ZTC4 211 aa14.12□□□□□ -0.15
HDAC7-220ENST00000471235 SFT2D1Q8WV19 159 aa14.12□□□□□ -0.15
HDAC7-220ENST00000471235 C16orf74Q96GX8 76 aa14.12□□□□□ -0.15
HDAC7-220ENST00000471235 EPDR1Q9UM22 224 aa14.12□□□□□ -0.15
HDAC7-220ENST00000471235 TENM2Q9NT68 2774 aa14.12□□□□□ -0.15
HDAC7-220ENST00000471235 DYNC2H1Q8NCM8 4307 aaKnown RBP14.11□□□□□ -0.15
HDAC7-220ENST00000471235 TEX48A0A1B0GUV7 120 aa14.11□□□□□ -0.15
HDAC7-220ENST00000471235 A0A1B0GV50 99 aa14.11□□□□□ -0.15
HDAC7-220ENST00000471235 ZNF324O75467 553 aaPredicted RBP14.11□□□□□ -0.15
HDAC7-220ENST00000471235 SPART-AS1P0CW21 52 aa14.11□□□□□ -0.15
HDAC7-220ENST00000471235 NKX2-5P52952 324 aaPredicted RBP14.11□□□□□ -0.15
HDAC7-220ENST00000471235 RNASE8Q8TDE3 154 aaKnown RBP14.11□□□□□ -0.15
HDAC7-220ENST00000471235 TMEM263Q8WUH6 116 aaKnown RBP14.11□□□□□ -0.15
HDAC7-220ENST00000471235 PYGO2Q9BRQ0 406 aa14.11□□□□□ -0.15
HDAC7-220ENST00000471235 ATG101Q9BSB4 218 aa14.11□□□□□ -0.15
HDAC7-220ENST00000471235 SULT1A2P50226 295 aa14.1□□□□□ -0.15
HDAC7-220ENST00000471235 Q6ZQT7 251 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms