RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 DEFB1P60022 68 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 CD300EQ496F6 205 aaPredicted RBP8.53□□□□□ -1.04
CHD3-208ENST00000470531 TMEM167AQ8TBQ9 72 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 C21orf62Q9NYP8 219 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 CUBNO60494 3623 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 SMIM27A0A1W2PRY6 76 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 E7EQL1 145 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 LOXL1Q08397 574 aaPredicted RBP8.53□□□□□ -1.04
CHD3-208ENST00000470531 DDB2Q92466 427 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 FMC1Q96HJ9 113 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 C16orf92Q96LL3 132 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 HIST1H4GQ99525 98 aa8.53□□□□□ -1.04
CHD3-208ENST00000470531 C19orf67A6NJJ6 358 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 PRSS46E5RG02 174 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 IGLV2-8P01709 118 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 FAM120AOSQ5T036 256 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 ORMDL3Q8N138 153 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 JMJD8Q96S16 334 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 K7ERJ3 54 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 IGLV1-44P01699 117 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 ZNF883P0CG24 379 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 SCGB1A1P11684 91 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 LOXP28300 417 aaPredicted RBP8.52□□□□□ -1.05
CHD3-208ENST00000470531 FAM57AQ8TBR7 257 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 C11orf52Q96A22 123 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 TRAV9-1A0A075B6T8 112 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 FOXE3Q13461 319 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 RAB1BQ9H0U4 201 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 DPM3Q9P2X0 92 aa8.52□□□□□ -1.05
CHD3-208ENST00000470531 TMEM97Q5BJF2 176 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 RNF183Q96D59 192 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 SPRY4Q9C004 299 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 CSMD1Q96PZ7 3565 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 IGHV3-64A0A075B6Q5 118 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 APOMO95445 188 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 Q86TA4 180 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 PCP2Q8IVA1 136 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 MYOZ3Q8TDC0 251 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 GAGE5Q13069 117 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 GAGE6Q13070 117 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 Q1RN00 199 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 TMEM78Q5T7P6 136 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 ADAMTSL5Q6ZMM2 481 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 ZNF418Q8TF45 676 aaPredicted RBP8.51□□□□□ -1.05
CHD3-208ENST00000470531 IFI27L1Q96BM0 104 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 MAP1LC3AQ9H492 121 aa8.51□□□□□ -1.05
CHD3-208ENST00000470531 A0A0G2JLM5 398 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 MBD3L4A6NDZ8 208 aaPredicted RBP8.5□□□□□ -1.05
CHD3-208ENST00000470531 MBD3L3A6NE82 208 aaPredicted RBP8.5□□□□□ -1.05
CHD3-208ENST00000470531 MBD3L5A6NJ08 208 aaPredicted RBP8.5□□□□□ -1.05
CHD3-208ENST00000470531 FAM90A9PA6NNJ1 464 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 VWC2LB2RUY7 222 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 RPS20P60866 119 aaKnown RBP8.5□□□□□ -1.05
CHD3-208ENST00000470531 C3orf36Q3SXR2 165 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 ZNF672Q499Z4 452 aaPredicted RBP8.5□□□□□ -1.05
CHD3-208ENST00000470531 OR5AN1Q8NGI8 311 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 MBD3L2Q8NHZ7 208 aaPredicted RBP8.5□□□□□ -1.05
CHD3-208ENST00000470531 BEX4Q9NWD9 120 aaPredicted RBP8.5□□□□□ -1.05
CHD3-208ENST00000470531 MRPL16Q9NX20 251 aaKnown RBP8.5□□□□□ -1.05
CHD3-208ENST00000470531 DKK2Q9UBU2 259 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 G3V318 75 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 CD5LO43866 347 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 IGLC1P0CG04 106 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 BRD3OSQ6XYD6 125 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 ASCL5Q7RTU5 278 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 OTORQ9NRC9 128 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 C2orf70A6NJV1 201 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 SH2D1AO60880 128 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 TTC32Q5I0X7 151 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 VGLL1Q99990 258 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 ST20Q9HBF5 79 aa8.5□□□□□ -1.05
CHD3-208ENST00000470531 TMEM265A0A087WTH1 108 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 A0A1B0GWB2 263 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 NBR2O15453 112 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 RHOGP84095 191 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 HIST1H1AQ02539 215 aaPredicted RBP8.49□□□□□ -1.05
CHD3-208ENST00000470531 ETDBQ3ZM63 59 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 BVES-AS1Q5T3Y7 98 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 NEGR1Q7Z3B1 354 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 ARPC1AQ92747 370 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 VKORC1Q9BQB6 163 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
CHD3-208ENST00000470531 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.49□□□□□ -1.05
CHD3-208ENST00000470531 BUB1B-PAK6H3BSN5 160 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 ATP5G2Q06055 141 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 C15orf32Q32M92 178 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 AMTNQ6UX39 209 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 SMIM17P0DL12 118 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 C5orf64Q2M2E5 130 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 IGF2BP2-AS1Q96M15 143 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 C1RLQ9NZP8 487 aa8.49□□□□□ -1.05
CHD3-208ENST00000470531 KIR3DS1Q14943 382 aa8.48□□□□□ -1.05
CHD3-208ENST00000470531 SPXQ9BT56 116 aa8.48□□□□□ -1.05
CHD3-208ENST00000470531 ACANP16112 2415 aa8.48□□□□□ -1.05
CHD3-208ENST00000470531 ZC2HC1BQ5TFG8 222 aa8.48□□□□□ -1.05
CHD3-208ENST00000470531 TNRC6BQ9UPQ9 1833 aaKnown RBP8.48□□□□□ -1.05
CHD3-208ENST00000470531 DEFB125Q8N687 156 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 URB1-AS1Q96HZ7 61 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 LHBP01229 141 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 NPYP01303 97 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms