RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 FKBP11Q9NYL4 201 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 JPT1Q9UK76 154 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 TNFSF18Q9UNG2 199 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 CACNA1BQ00975 2339 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 MYLKQ15746 1914 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 CECR2Q9BXF3 1484 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 DLC1Q96QB1 1528 aa1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 IGLV3-32A0A0A0MS00 114 aa1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 A0A1B0GX51 115 aa1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 SAA1P0DJI8 122 aaPredicted RBP1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 HAGHLQ6PII5 290 aaPredicted RBP1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 OR5A2Q8NGI9 324 aa1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 NAT14Q8WUY8 206 aa1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 NABP2Q9BQ15 211 aa1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 C22orf24Q9Y442 160 aa1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 ANKRD31Q8N7Z5 1873 aa1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 UNC13CQ8NB66 2214 aa1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 NCOA6Q14686 2063 aaPredicted RBP1.17□□□□□ -2.22
PRPF40A-205ENST00000467114 COL24A1Q17RW2 1714 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 C3orf85A0A1B0GTC6 90 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 LOC105371267A0A1B0GV96 52 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 LOC107986453A0A1B0GWG9 222 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 DPM2O94777 84 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 CMPK1P30085 196 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 SDC4P31431 198 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 LSM3P62310 102 aaKnown RBP1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 ALX1Q15699 326 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 CCDC153Q494R4 210 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 GLIPR1L1Q6UWM5 242 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 OR51A4Q8NGJ6 313 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 WFDC10AQ9H1F0 79 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 TCOF1Q13428 1488 aaKnown RBP1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 ZFC3H1O60293 1989 aaKnown RBP1.16□□□□□ -2.22
PRPF40A-205ENST00000467114 OVOS2A0A0G2JMS6 1433 aa1.15□□□□□ -2.22
PRPF40A-205ENST00000467114 FAM135BQ49AJ0 1406 aa1.15□□□□□ -2.22
PRPF40A-205ENST00000467114 PTPRFP10586 1907 aa1.15□□□□□ -2.22
PRPF40A-205ENST00000467114 LOC107984156A0A0G2JMH3 177 aa1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 TNFSF15O95150 251 aa1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 PPYP01298 95 aa1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 SLC25A4P12235 298 aa1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 BLCAPP62952 87 aa1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 CASC2Q6XLA1 102 aa1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 ZCCHC23Q6ZST2 131 aa1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 ARL17AQ8IVW1 177 aa1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 MCM3APO60318 1980 aa1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 TANC2Q9HCD6 1990 aa1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 HELZ2Q9BYK8 2649 aaKnown RBP1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 CHD3Q12873 2000 aaKnown RBP1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 DLG5Q8TDM6 1919 aa1.15□□□□□ -2.23
PRPF40A-205ENST00000467114 MED23Q9ULK4 1368 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 BORCS7-ASMTA0A0B4J1R7 106 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 C9JAW5 83 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 JMJD7-PLA2G4BH0Y9G9 81 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 UQCRQO14949 82 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 IGHV3-33P01772 117 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 HBDP02042 147 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 MT-ND4LP03901 98 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 PAEPP09466 180 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 SCTP09683 121 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 KRTAP10-4P60372 401 aaPredicted RBP1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 PSPHP78330 225 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 TCTE3Q8IZS6 198 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 PLPP5Q8NEB5 264 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 CALML5Q9NZT1 146 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 HIGD1AQ9Y241 93 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 MYO18AQ92614 2054 aaKnown RBP1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 CASP8AP2Q9UKL3 1982 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 FER1L6Q2WGJ9 1857 aa1.14□□□□□ -2.23
PRPF40A-205ENST00000467114 ALPK3Q96L96 1907 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 ARAP1Q96P48 1450 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 COL6A6A6NMZ7 2263 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 TRAV23DV6A0A075B6W5 121 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 A0A1B0GW64 132 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 TMEM189A5PLL7 270 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 ARPC5O15511 151 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 SLC25A5P05141 298 aaKnown RBP1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 DBIP07108 87 aaKnown RBP1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 NEDD8Q15843 81 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 TMEM244Q5VVB8 128 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 Q5XG85 94 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 CIB3Q96Q77 187 aaPredicted RBP1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 HSPB8Q9UJY1 196 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 DSPPQ9NZW4 1301 aa1.13□□□□□ -2.23
PRPF40A-205ENST00000467114 NCR3O14931 201 aa1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 TCRAP04437 139 aa1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 ETV6P41212 452 aa1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 GTF2A1P52655 376 aaPredicted RBP1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 DEFB115Q30KQ5 88 aa1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 HSD17B12Q53GQ0 312 aa1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 C5orf17Q8NAS9 161 aa1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 AP1S3Q96PC3 154 aa1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 AMELYQ99218 206 aa1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 MPC1Q9Y5U8 109 aa1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 SIP14410 1827 aa1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 FLG2Q5D862 2391 aaPredicted RBP1.12□□□□□ -2.23
PRPF40A-205ENST00000467114 ARHGEF10O15013 1369 aa1.11□□□□□ -2.23
PRPF40A-205ENST00000467114 XIRP1Q702N8 1843 aaKnown RBP1.11□□□□□ -2.23
PRPF40A-205ENST00000467114 BBIP1A8MTZ0 92 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms