RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 CD5P06127 495 aa10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 ARL14EPLP0DKL9 152 aa10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 XGP55808 180 aa10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 PEA15Q15121 130 aa10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 MIR17HGQ75NE6 70 aa10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 EIF5A2Q9GZV4 153 aaKnown RBP10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 SMDT1Q9H4I9 107 aa10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 TMEM167BQ9NRX6 74 aa10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 RABAC1Q9UI14 185 aa10.41□□□□□ -0.74
HMGXB4-206ENST00000466438 HMGB3O15347 200 aaKnown RBP10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 GUK1Q16774 197 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 TOR2AQ5JU69 321 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 SERTAD4-AS1Q5TG53 156 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 SPATA31B1PQ5VZV4 182 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 PATE2Q6UY27 113 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 TCF24Q7RTU0 167 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 FAM24BQ8N5W8 94 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 ZNRF2Q8NHG8 242 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 UHRF2Q96PU4 802 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 ATG101Q9BSB4 218 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 MS4A6AQ9H2W1 248 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 GNG13Q9P2W3 67 aa10.4□□□□□ -0.74
HMGXB4-206ENST00000466438 TRAV2A0A0B4J234 112 aa10.39□□□□□ -0.75
HMGXB4-206ENST00000466438 RBFOX3A6NFN3 312 aa10.39□□□□□ -0.75
HMGXB4-206ENST00000466438 H3BRN7 92 aa10.39□□□□□ -0.75
HMGXB4-206ENST00000466438 DNASE2O00115 360 aaPredicted RBP10.39□□□□□ -0.75
HMGXB4-206ENST00000466438 BCL2P10415 239 aa10.39□□□□□ -0.75
HMGXB4-206ENST00000466438 GCHFRP30047 84 aa10.39□□□□□ -0.75
HMGXB4-206ENST00000466438 NARS2Q96I59 477 aaKnown RBP10.39□□□□□ -0.75
HMGXB4-206ENST00000466438 ZNF414Q96IQ9 312 aa10.39□□□□□ -0.75
HMGXB4-206ENST00000466438 SHANK2-AS3Q9BTD1 123 aa10.39□□□□□ -0.75
HMGXB4-206ENST00000466438 SLC25A39Q9BZJ4 359 aaPredicted RBP10.39□□□□□ -0.75
HMGXB4-206ENST00000466438 ARL2-SNX15V9GYD0 113 aa10.39□□□□□ -0.75
HMGXB4-206ENST00000466438 BTF3P20290 206 aaKnown RBP10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 S100A1P23297 94 aa10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 UBE2L3P68036 154 aaKnown RBP10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 USF2Q15853 346 aaPredicted RBP10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 TMEM88Q6PEY1 159 aa10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 TOMM20LQ6UXN7 152 aa10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 SYT8Q8NBV8 401 aa10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 METTL26Q96S19 204 aa10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 TXNDC17Q9BRA2 123 aa10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 PAXXQ9BUH6 204 aa10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 SLC25A2Q9BXI2 301 aa10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 TREM1Q9NP99 234 aa10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 VAX2Q9UIW0 290 aa10.38□□□□□ -0.75
HMGXB4-206ENST00000466438 IGHV3OR16-13A0A075B7E8 117 aa10.37□□□□□ -0.75
HMGXB4-206ENST00000466438 IGHV3-74A0A0B4J1X5 117 aa10.37□□□□□ -0.75
HMGXB4-206ENST00000466438 LOC102723971A0A1B0GUV8 181 aa10.37□□□□□ -0.75
HMGXB4-206ENST00000466438 CCL20P78556 96 aa10.37□□□□□ -0.75
HMGXB4-206ENST00000466438 ZNF506Q5JVG8 444 aa10.37□□□□□ -0.75
HMGXB4-206ENST00000466438 BPIFA4PQ86YQ2 179 aa10.37□□□□□ -0.75
HMGXB4-206ENST00000466438 C15orf53Q8NAA6 179 aa10.37□□□□□ -0.75
HMGXB4-206ENST00000466438 OR51M1Q9H341 326 aa10.37□□□□□ -0.75
HMGXB4-206ENST00000466438 TMEM14CQ9P0S9 112 aa10.37□□□□□ -0.75
HMGXB4-206ENST00000466438 MDFICQ9P1T7 246 aa10.37□□□□□ -0.75
HMGXB4-206ENST00000466438 TEX48A0A1B0GUV7 120 aa10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 TMEM189A5PLL7 270 aa10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 KRBOX1C9JBD0 128 aa10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 NDUFS6O75380 124 aaKnown RBP10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 EIF3GO75821 320 aaKnown RBP eCLIP10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 HTN3P15516 51 aa10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 SUN5Q8TC36 379 aa10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 ZNF503Q96F45 646 aa10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 FAM167A-AS1Q96KT0 104 aa10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 GPR82Q96P67 336 aa10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 NIPSNAP3BQ9BS92 247 aa10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 TMPRSS5Q9H3S3 457 aa10.36□□□□□ -0.75
HMGXB4-206ENST00000466438 TRAV5A0A0B4J249 113 aa10.35□□□□□ -0.75
HMGXB4-206ENST00000466438 ZNF98A6NK75 572 aa10.35□□□□□ -0.75
HMGXB4-206ENST00000466438 KNCNA6PVL3 124 aa10.35□□□□□ -0.75
HMGXB4-206ENST00000466438 RPL7P18124 248 aaKnown RBP10.35□□□□□ -0.75
HMGXB4-206ENST00000466438 NPPCP23582 126 aa10.35□□□□□ -0.75
HMGXB4-206ENST00000466438 EMP1P54849 157 aa10.35□□□□□ -0.75
HMGXB4-206ENST00000466438 MEF2BQ02080 365 aaPredicted RBP10.35□□□□□ -0.75
HMGXB4-206ENST00000466438 MORN5Q5VZ52 161 aa10.35□□□□□ -0.75
HMGXB4-206ENST00000466438 GRAMD2BQ96HH9 432 aa10.35□□□□□ -0.75
HMGXB4-206ENST00000466438 C1QTNF4Q9BXJ3 329 aa10.35□□□□□ -0.75
HMGXB4-206ENST00000466438 NKX6-2Q9C056 277 aaPredicted RBP10.35□□□□□ -0.75
HMGXB4-206ENST00000466438 PAGE4O60829 102 aa10.34□□□□□ -0.75
HMGXB4-206ENST00000466438 OR10J4P0C629 311 aa10.34□□□□□ -0.75
HMGXB4-206ENST00000466438 RPL11P62913 178 aaKnown RBP10.34□□□□□ -0.75
HMGXB4-206ENST00000466438 ICAM4Q14773 271 aa10.34□□□□□ -0.75
HMGXB4-206ENST00000466438 ACTL10Q5JWF8 245 aa10.34□□□□□ -0.75
HMGXB4-206ENST00000466438 C1orf194Q5T5A4 169 aa10.34□□□□□ -0.75
HMGXB4-206ENST00000466438 RXFP4Q8TDU9 374 aa10.34□□□□□ -0.75
HMGXB4-206ENST00000466438 C17orf77Q96MU5 243 aa10.34□□□□□ -0.75
HMGXB4-206ENST00000466438 NEU1Q99519 415 aa10.34□□□□□ -0.75
HMGXB4-206ENST00000466438 TMEM231Q9H6L2 316 aa10.34□□□□□ -0.75
HMGXB4-206ENST00000466438 DKK2Q9UBU2 259 aa10.34□□□□□ -0.75
HMGXB4-206ENST00000466438 A0A1W2PRE2 83 aa10.33□□□□□ -0.76
HMGXB4-206ENST00000466438 A0A1W2PS18 150 aa10.33□□□□□ -0.76
HMGXB4-206ENST00000466438 F6UZH7 168 aa10.33□□□□□ -0.76
HMGXB4-206ENST00000466438 PDE6DO43924 150 aa10.33□□□□□ -0.76
HMGXB4-206ENST00000466438 PYYP10082 97 aa10.33□□□□□ -0.76
HMGXB4-206ENST00000466438 HIST1H1EP10412 219 aaKnown RBP10.33□□□□□ -0.76
HMGXB4-206ENST00000466438 CRYBB3P26998 211 aa10.33□□□□□ -0.76
HMGXB4-206ENST00000466438 UBE2G2P60604 165 aa10.33□□□□□ -0.76
HMGXB4-206ENST00000466438 CST9LP1Q5W188 147 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms