RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SPANXN2Q5MJ10 180 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 MIC13Q5XKP0 118 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 TRIQKQ629K1 86 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 SSX7Q7RTT5 188 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 C15orf53Q8NAA6 179 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 ZBTB8BQ8NAP8 495 aaPredicted RBP3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 ZNRF2Q8NHG8 242 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 MGST2Q99735 147 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 KRTAP4-7Q9BYR0 210 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 RBM38Q9H0Z9 239 aaKnown RBP3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 Q9H8V8 135 aa3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 ZNF331Q9NQX6 463 aaPredicted RBP3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 RCL1Q9Y2P8 373 aaKnown RBP3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 LSM5Q9Y4Y9 91 aaKnown RBP3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 TIMM8BQ9Y5J9 83 aaPredicted RBP3.26□□□□□ -1.89
GTF3C3-208ENST00000455546 HECTD4Q9Y4D8 3996 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 TRAV26-1A0A087WT03 109 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 C5orf51A6NDU8 294 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 NAP1L6A6NFF2 107 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 C16orf90A8MZG2 172 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 L7N2F9 121 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 ZNF701M0R085 212 aaPredicted RBP3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 VCYO14598 125 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 PLA2G10O15496 165 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 COX7A2P2O60397 106 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 GAGE7O76087 117 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 CST7O76096 145 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 GAGE12FP0CL80 117 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 GAGE12GP0CL81 117 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 GAGE12IP0CL82 117 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 CT45A10P0DMU9 189 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 TSPOP30536 169 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 FUSP35637 526 aaKnown RBP eCLIP3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 BCAP31P51572 246 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 ERCC8Q13216 396 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 CLINT1Q14677 625 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 ESRGQ1W209 222 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 GFI1BQ5VTD9 330 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 C10orf113Q5VZT2 155 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 Q6ZQT7 251 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 NRARPQ7Z6K4 114 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 BPIFA4PQ86YQ2 179 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 TMEM256Q8N2U0 113 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 C6orf223Q8N319 242 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 RNASE8Q8TDE3 154 aaKnown RBP3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 ZNF431Q8TF32 576 aaPredicted RBP3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 DEDD2Q8WXF8 326 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 GNPNAT1Q96EK6 184 aaPredicted RBP3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 SAT2Q96F10 170 aaPredicted RBP3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 C16orf74Q96GX8 76 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 URB1-AS1Q96HZ7 61 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 SEC22CQ9BRL7 303 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 KRTAP1-5Q9BYS1 174 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 DNAJC4Q9NNZ3 241 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 ZNF586Q9NXT0 402 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 PKHD1P08F94 4074 aa3.25□□□□□ -1.89
GTF3C3-208ENST00000455546 GAGE12JA6NER3 117 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 CENPXA8MT69 81 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 FNDC10F2Z333 226 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 H7BYZ3 331 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 K7EPK0 472 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 M0R3E3 92 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 TSC22D2O75157 780 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 RLN2P04090 185 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 TCRBP04435 133 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 IGLC2P0DOY2 106 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 IL7P13232 177 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 RNASE4P34096 147 aaKnown RBP3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 CAMLGP49069 296 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 CAV2P51636 162 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 TAS2R30P59541 319 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 CD300CQ08708 224 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 GCSAMLQ5JQS6 135 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 LCN15Q6UWW0 184 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 ZNF493Q6ZR52 646 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 Q6ZRG5 221 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 Q6ZTI0 123 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 SPATA12Q7Z6I5 190 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 ZNF546Q86UE3 836 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 OR10J6PQ8NGY7 276 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 MPLKIPQ8TAP9 179 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 TMEM263Q8WUH6 116 aaKnown RBP3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 BLNKQ8WV28 456 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 MITD1Q8WV92 249 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 SLC50A1Q9BRV3 221 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 C11orf1Q9H5F2 150 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 GSN-AS1Q9NRJ2 163 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 KLF12Q9Y4X4 402 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 TNFRSF18Q9Y5U5 241 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 DNAH17Q9UFH2 4485 aa3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 DYNC1H1Q14204 4646 aaKnown RBP3.24□□□□□ -1.89
GTF3C3-208ENST00000455546 IGSF23A1L1A6 192 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 SNURFLB1AK76 121 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 LYRM1O43325 122 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 ZNF324O75467 553 aaPredicted RBP3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 NDUFB4O95168 129 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 IGHV3-53P01767 116 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 PYYP10082 97 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 M6PRP20645 277 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms